RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 IFITM3Q01628 133 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 Q0VG73 95 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 FAM74A4Q5TZK3 123 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 SFRP2Q96HF1 295 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 MARVELD1Q9BSK0 173 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 C1orf43Q9BWL3 253 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 TMEM167BQ9NRX6 74 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 NDUFA13Q9P0J0 144 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 A0A087WWL8 130 aa6.41□□□□□ -1.38
LIG1-209ENST00000596104 TRBV10-1A0A0K0K1A3 114 aa6.41□□□□□ -1.38
LIG1-209ENST00000596104 KRBOX1C9JBD0 128 aa6.41□□□□□ -1.38
LIG1-209ENST00000596104 USP17L23D6RBM5 183 aa6.41□□□□□ -1.38
LIG1-209ENST00000596104 PANO1I0J062 215 aa6.41□□□□□ -1.38
LIG1-209ENST00000596104 CXorf1O96002 111 aa6.41□□□□□ -1.38
LIG1-209ENST00000596104 HSD17B11Q8NBQ5 300 aa6.41□□□□□ -1.38
LIG1-209ENST00000596104 OR11H4Q8NGC9 324 aa6.41□□□□□ -1.38
LIG1-209ENST00000596104 PSMG3Q9BT73 122 aaPredicted RBP6.41□□□□□ -1.38
LIG1-209ENST00000596104 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.41□□□□□ -1.38
LIG1-209ENST00000596104 TRBV7-3A0A075B6L6 115 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 TRBV6-8A0A0A6YYG3 113 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 A0A1W2PRE2 83 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 GRIFINA4D1Z8 144 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 M0R036 132 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 SSNA1O43805 119 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 PRSS1P07477 247 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 ATP6V0CP27449 155 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 RPL36AP83881 106 aaKnown RBP6.4□□□□□ -1.38
LIG1-209ENST00000596104 MPV17L2Q567V2 206 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 KCNIP4Q6PIL6 250 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 COX8CQ7Z4L0 72 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 Q86TA4 180 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 C9orf163Q8N9P6 203 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 OR10G8Q8NGN5 311 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 S100ZQ8WXG8 99 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 RPL36ALQ969Q0 106 aaKnown RBP6.4□□□□□ -1.38
LIG1-209ENST00000596104 ZC2HC1AQ96GY0 325 aa6.4□□□□□ -1.38
LIG1-209ENST00000596104 TMEM262E9PQX1 116 aa6.39□□□□□ -1.39
LIG1-209ENST00000596104 M0R381 172 aa6.39□□□□□ -1.39
LIG1-209ENST00000596104 PEX7O00628 323 aa6.39□□□□□ -1.39
LIG1-209ENST00000596104 SH2D1AO60880 128 aa6.39□□□□□ -1.39
LIG1-209ENST00000596104 MBP02144 154 aa6.39□□□□□ -1.39
LIG1-209ENST00000596104 SERF2P84101 59 aa6.39□□□□□ -1.39
LIG1-209ENST00000596104 DGAT2L7PQ6IED9 249 aa6.39□□□□□ -1.39
LIG1-209ENST00000596104 KRTAP26-1Q6PEX3 210 aa6.39□□□□□ -1.39
LIG1-209ENST00000596104 C15orf54Q8N8G6 183 aa6.39□□□□□ -1.39
LIG1-209ENST00000596104 ACTR3CQ9C0K3 210 aaPredicted RBP6.39□□□□□ -1.39
LIG1-209ENST00000596104 PHLDA3Q9Y5J5 127 aa6.39□□□□□ -1.39
LIG1-209ENST00000596104 IFNA7P01567 189 aa6.38□□□□□ -1.39
LIG1-209ENST00000596104 HLA-DQA1P01909 254 aa6.38□□□□□ -1.39
LIG1-209ENST00000596104 CRPP02741 224 aa6.38□□□□□ -1.39
LIG1-209ENST00000596104 ANGP03950 147 aaKnown RBP6.38□□□□□ -1.39
LIG1-209ENST00000596104 TPT1P13693 172 aaKnown RBP6.38□□□□□ -1.39
LIG1-209ENST00000596104 ZNF726P1Q15940 193 aa6.38□□□□□ -1.39
LIG1-209ENST00000596104 SDIM1Q6ZPB5 146 aa6.38□□□□□ -1.39
LIG1-209ENST00000596104 Q6ZRU5 148 aa6.38□□□□□ -1.39
LIG1-209ENST00000596104 ZFP82Q8N141 532 aa6.38□□□□□ -1.39
LIG1-209ENST00000596104 TNFSF18Q9UNG2 199 aa6.38□□□□□ -1.39
LIG1-209ENST00000596104 CIRBPQ14011 172 aaKnown RBP6.37□□□□□ -1.39
LIG1-209ENST00000596104 MIAQ16674 131 aa6.37□□□□□ -1.39
LIG1-209ENST00000596104 ZNF674Q2M3X9 581 aa6.37□□□□□ -1.39
LIG1-209ENST00000596104 LINC01559Q495D7 138 aa6.37□□□□□ -1.39
LIG1-209ENST00000596104 FAM162BQ5T6X4 162 aa6.37□□□□□ -1.39
LIG1-209ENST00000596104 PRR27Q6MZM9 219 aa6.37□□□□□ -1.39
LIG1-209ENST00000596104 NEXN-AS1Q8NBZ9 246 aa6.37□□□□□ -1.39
LIG1-209ENST00000596104 HIST1H2BAQ96A08 127 aa6.37□□□□□ -1.39
LIG1-209ENST00000596104 AQP10Q96PS8 301 aa6.37□□□□□ -1.39
LIG1-209ENST00000596104 PRR34Q9NV39 138 aa6.37□□□□□ -1.39
LIG1-209ENST00000596104 ZFP30Q9Y2G7 519 aa6.37□□□□□ -1.39
LIG1-209ENST00000596104 TMSB15BA0A087X1C1 80 aa6.36□□□□□ -1.39
LIG1-209ENST00000596104 FAM74A7A6NL05 159 aa6.36□□□□□ -1.39
LIG1-209ENST00000596104 PTTG1O95997 202 aa6.36□□□□□ -1.39
LIG1-209ENST00000596104 UBE2G2P60604 165 aa6.36□□□□□ -1.39
LIG1-209ENST00000596104 RPL19P84098 196 aaKnown RBP6.36□□□□□ -1.39
LIG1-209ENST00000596104 NTM-AS1Q6ZSK4 140 aa6.36□□□□□ -1.39
LIG1-209ENST00000596104 A0A0D9SG52 128 aa6.35□□□□□ -1.39
LIG1-209ENST00000596104 TRBV6-1A0A0K0K1D8 114 aa6.35□□□□□ -1.39
LIG1-209ENST00000596104 CTXND1A0A1B0GTU2 59 aa6.35□□□□□ -1.39
LIG1-209ENST00000596104 RAB4BP61018 213 aa6.35□□□□□ -1.39
LIG1-209ENST00000596104 CHCHD5Q9BSY4 110 aa6.35□□□□□ -1.39
LIG1-209ENST00000596104 NKX6-2Q9C056 277 aaPredicted RBP6.35□□□□□ -1.39
LIG1-209ENST00000596104 LRP2P98164 4655 aa6.35□□□□□ -1.39
LIG1-209ENST00000596104 PKIAP61925 76 aa6.34□□□□□ -1.39
LIG1-209ENST00000596104 CNBPP62633 177 aaKnown RBP6.34□□□□□ -1.39
LIG1-209ENST00000596104 RBX1P62877 108 aa6.34□□□□□ -1.39
LIG1-209ENST00000596104 ZNF56Q15929 161 aa6.34□□□□□ -1.39
LIG1-209ENST00000596104 CLPSL2Q6UWE3 100 aa6.34□□□□□ -1.39
LIG1-209ENST00000596104 OR10AG1Q8NH19 301 aa6.34□□□□□ -1.39
LIG1-209ENST00000596104 FMC1Q96HJ9 113 aa6.34□□□□□ -1.39
LIG1-209ENST00000596104 VAX2Q9UIW0 290 aa6.34□□□□□ -1.39
LIG1-209ENST00000596104 LTAP01374 205 aa6.33□□□□□ -1.4
LIG1-209ENST00000596104 Q5BKY6 102 aa6.33□□□□□ -1.4
LIG1-209ENST00000596104 RPL7L1Q6DKI1 246 aaKnown RBP6.33□□□□□ -1.4
LIG1-209ENST00000596104 LINC00269Q8N2A0 174 aa6.33□□□□□ -1.4
LIG1-209ENST00000596104 CLRN3Q8NCR9 226 aa6.33□□□□□ -1.4
LIG1-209ENST00000596104 A0A087WYN8 130 aa6.32□□□□□ -1.4
LIG1-209ENST00000596104 SLPIP03973 132 aa6.32□□□□□ -1.4
LIG1-209ENST00000596104 CXCL1P09341 107 aa6.32□□□□□ -1.4
LIG1-209ENST00000596104 CHTF8P0CG12 524 aa6.32□□□□□ -1.4
LIG1-209ENST00000596104 UBE2G1P62253 170 aa6.32□□□□□ -1.4
LIG1-209ENST00000596104 GAGE6Q13070 117 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms