RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 U3KQK5 164 aa10.54□□□□□ -0.72
SHKBP1-211ENST00000595945 TRGV1A0A0A0MS02 117 aa10.53□□□□□ -0.72
SHKBP1-211ENST00000595945 A8MWV9 139 aa10.53□□□□□ -0.72
SHKBP1-211ENST00000595945 KIAA1644Q3SXP7 199 aa10.53□□□□□ -0.72
SHKBP1-211ENST00000595945 DEFB121Q5J5C9 76 aa10.53□□□□□ -0.72
SHKBP1-211ENST00000595945 SAMD10Q9BYL1 202 aa10.53□□□□□ -0.72
SHKBP1-211ENST00000595945 HIST1H2BKO60814 126 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 HIST1H2BJP06899 126 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 HIST1H2BOP23527 126 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 HIST1H2BBP33778 126 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 HIST1H2BDP58876 126 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 HIST1H2BCP62807 126 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 HIST2H2BEQ16778 126 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 CFAP126Q5VTH2 177 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 HIST1H2BHQ93079 126 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 HIST1H2BNQ99877 126 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 HIST1H2BMQ99879 126 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 TM2D3Q9BRN9 247 aa10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 ALKBH7Q9BT30 221 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-211ENST00000595945 A0A087WWL8 130 aa10.51□□□□□ -0.73
SHKBP1-211ENST00000595945 LYRM9A8MSI8 78 aa10.51□□□□□ -0.73
SHKBP1-211ENST00000595945 RAB5BP61020 215 aa10.51□□□□□ -0.73
SHKBP1-211ENST00000595945 DNAH9Q9NYC9 4486 aa10.5□□□□□ -0.73
SHKBP1-211ENST00000595945 SMIM17P0DL12 118 aa10.5□□□□□ -0.73
SHKBP1-211ENST00000595945 EMP1P54849 157 aa10.5□□□□□ -0.73
SHKBP1-211ENST00000595945 ZFP2Q6ZN57 461 aa10.5□□□□□ -0.73
SHKBP1-211ENST00000595945 MRAP2Q96G30 205 aa10.5□□□□□ -0.73
SHKBP1-211ENST00000595945 C18orf15Q96N68 181 aa10.5□□□□□ -0.73
SHKBP1-211ENST00000595945 SPATA25Q9BR10 227 aa10.5□□□□□ -0.73
SHKBP1-211ENST00000595945 MEGF8Q7Z7M0 2845 aa10.5□□□□□ -0.73
SHKBP1-211ENST00000595945 STAB2Q8WWQ8 2551 aa10.5□□□□□ -0.73
SHKBP1-211ENST00000595945 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
SHKBP1-211ENST00000595945 D6R8Y8 96 aa10.49□□□□□ -0.73
SHKBP1-211ENST00000595945 SMKR1H3BMG3 65 aa10.49□□□□□ -0.73
SHKBP1-211ENST00000595945 RHODO00212 210 aa10.49□□□□□ -0.73
SHKBP1-211ENST00000595945 DEFB4AO15263 64 aa10.49□□□□□ -0.73
SHKBP1-211ENST00000595945 PPBPP02775 128 aa10.49□□□□□ -0.73
SHKBP1-211ENST00000595945 SRIP30626 198 aa10.49□□□□□ -0.73
SHKBP1-211ENST00000595945 MRAPQ8TCY5 172 aa10.49□□□□□ -0.73
SHKBP1-211ENST00000595945 C11orf68Q9H3H3 251 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-211ENST00000595945 EDA2RQ9HAV5 297 aa10.49□□□□□ -0.73
SHKBP1-211ENST00000595945 DKK2Q9UBU2 259 aa10.49□□□□□ -0.73
SHKBP1-211ENST00000595945 GAGE12BA1L429 117 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 GAGE7O76087 117 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 GAS8-AS1O95177 125 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 NCR2O95944 276 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 MGPP08493 103 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 GAGE12FP0CL80 117 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 GAGE12GP0CL81 117 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 GAGE12IP0CL82 117 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 CKS2P33552 79 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 FAM74A4Q5TZK3 123 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 FAM222AQ5U5X8 452 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 SUMO4Q6EEV6 95 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 ORMDL3Q8N138 153 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 PRELID3AQ96N28 172 aa10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 HUWE1Q7Z6Z7 4374 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-211ENST00000595945 TRAV26-2A0A0B4J265 109 aa10.47□□□□□ -0.73
SHKBP1-211ENST00000595945 NRACQ8N912 160 aa10.47□□□□□ -0.73
SHKBP1-211ENST00000595945 OR4C5Q8NGB2 326 aa10.47□□□□□ -0.73
SHKBP1-211ENST00000595945 ZNF479Q96JC4 524 aa10.47□□□□□ -0.73
SHKBP1-211ENST00000595945 CELA1Q9UNI1 258 aa10.47□□□□□ -0.73
SHKBP1-211ENST00000595945 TMA7Q9Y2S6 64 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-211ENST00000595945 CIDEAO60543 219 aa10.46□□□□□ -0.73
SHKBP1-211ENST00000595945 NPYP01303 97 aa10.46□□□□□ -0.73
SHKBP1-211ENST00000595945 GATA1P15976 413 aaPredicted RBP10.46□□□□□ -0.73
SHKBP1-211ENST00000595945 Q0VG73 95 aa10.46□□□□□ -0.73
SHKBP1-211ENST00000595945 C18orf32Q8TCD1 76 aa10.46□□□□□ -0.73
SHKBP1-211ENST00000595945 B9D2Q9BPU9 175 aa10.46□□□□□ -0.73
SHKBP1-211ENST00000595945 LAMTOR2Q9Y2Q5 125 aa10.46□□□□□ -0.73
SHKBP1-211ENST00000595945 IGHV3-73A0A0B4J1V6 119 aa10.45□□□□□ -0.74
SHKBP1-211ENST00000595945 TEX48A0A1B0GUV7 120 aa10.45□□□□□ -0.74
SHKBP1-211ENST00000595945 M0QY20 66 aa10.45□□□□□ -0.74
SHKBP1-211ENST00000595945 IGHV3-53P01767 116 aa10.45□□□□□ -0.74
SHKBP1-211ENST00000595945 ZNF56Q15929 161 aa10.45□□□□□ -0.74
SHKBP1-211ENST00000595945 OR10J3Q5JRS4 329 aa10.45□□□□□ -0.74
SHKBP1-211ENST00000595945 COA6Q5JTJ3 125 aaKnown RBP10.45□□□□□ -0.74
SHKBP1-211ENST00000595945 Q6ZSN1 163 aa10.45□□□□□ -0.74
SHKBP1-211ENST00000595945 COL7A1Q02388 2944 aa10.45□□□□□ -0.74
SHKBP1-211ENST00000595945 TRGV2A0A075B6R0 118 aa10.44□□□□□ -0.74
SHKBP1-211ENST00000595945 PRSS47A8MTI9 375 aa10.44□□□□□ -0.74
SHKBP1-211ENST00000595945 F5H697 171 aa10.44□□□□□ -0.74
SHKBP1-211ENST00000595945 TNFRSF6BO95407 300 aa10.44□□□□□ -0.74
SHKBP1-211ENST00000595945 SPART-AS1P0CW21 52 aa10.44□□□□□ -0.74
SHKBP1-211ENST00000595945 DEFB130BP0DP73 79 aa10.44□□□□□ -0.74
SHKBP1-211ENST00000595945 DEFB130AP0DP74 79 aa10.44□□□□□ -0.74
SHKBP1-211ENST00000595945 IQCJQ1A5X6 159 aa10.44□□□□□ -0.74
SHKBP1-211ENST00000595945 RPL39LQ96EH5 51 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-211ENST00000595945 TRBV6-5A0A0K0K1A5 114 aa10.42□□□□□ -0.74
SHKBP1-211ENST00000595945 PPP1R17O96001 155 aa10.42□□□□□ -0.74
SHKBP1-211ENST00000595945 NDUFA6P56556 154 aa10.42□□□□□ -0.74
SHKBP1-211ENST00000595945 LINC00310P59036 64 aa10.42□□□□□ -0.74
SHKBP1-211ENST00000595945 DAD1P61803 113 aa10.42□□□□□ -0.74
SHKBP1-211ENST00000595945 FHL2Q14192 279 aa10.42□□□□□ -0.74
SHKBP1-211ENST00000595945 URB1-AS1Q96HZ7 61 aa10.42□□□□□ -0.74
SHKBP1-211ENST00000595945 A0A0J9YWU9 116 aa10.41□□□□□ -0.74
SHKBP1-211ENST00000595945 H7C1H1 209 aa10.41□□□□□ -0.74
SHKBP1-211ENST00000595945 RPL32P62910 135 aaKnown RBP10.41□□□□□ -0.74
SHKBP1-211ENST00000595945 DEFA6Q01524 100 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms