RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 KRTAP4-5Q9BYR2 181 aa12.27□□□□□ -0.45
HOMER3-208ENST00000595756 SCRT2Q9NQ03 307 aa12.27□□□□□ -0.45
HOMER3-208ENST00000595756 TRGV4A0A0C4DH28 118 aa12.26□□□□□ -0.45
HOMER3-208ENST00000595756 NXPH4O95158 308 aa12.26□□□□□ -0.45
HOMER3-208ENST00000595756 RPL19P84098 196 aaKnown RBP12.26□□□□□ -0.45
HOMER3-208ENST00000595756 FHL2Q14192 279 aa12.26□□□□□ -0.45
HOMER3-208ENST00000595756 ZFP82Q8N141 532 aa12.26□□□□□ -0.45
HOMER3-208ENST00000595756 HHLA3Q9XRX5 114 aa12.26□□□□□ -0.45
HOMER3-208ENST00000595756 K7EN84 100 aa12.25□□□□□ -0.45
HOMER3-208ENST00000595756 RS1O15537 224 aa12.25□□□□□ -0.45
HOMER3-208ENST00000595756 OR5AL1P0C617 328 aa12.25□□□□□ -0.45
HOMER3-208ENST00000595756 MRPL23Q16540 153 aaKnown RBP12.25□□□□□ -0.45
HOMER3-208ENST00000595756 TMEM241Q24JQ0 296 aa12.25□□□□□ -0.45
HOMER3-208ENST00000595756 Q6ZRN7 208 aaPredicted RBP12.25□□□□□ -0.45
HOMER3-208ENST00000595756 FAM231DQ6ZW35 169 aa12.25□□□□□ -0.45
HOMER3-208ENST00000595756 NUDT10Q8NFP7 164 aa12.25□□□□□ -0.45
HOMER3-208ENST00000595756 NUDT11Q96G61 164 aa12.25□□□□□ -0.45
HOMER3-208ENST00000595756 SSBP4Q9BWG4 385 aaPredicted RBP12.25□□□□□ -0.45
HOMER3-208ENST00000595756 SNAI2O43623 268 aa12.24□□□□□ -0.45
HOMER3-208ENST00000595756 KRTAP10-2P60368 255 aa12.24□□□□□ -0.45
HOMER3-208ENST00000595756 SRSF3P84103 164 aaKnown RBP12.24□□□□□ -0.45
HOMER3-208ENST00000595756 LINC01551Q86U37 167 aa12.24□□□□□ -0.45
HOMER3-208ENST00000595756 MAPKAPK5-AS1Q8N8E1 139 aa12.24□□□□□ -0.45
HOMER3-208ENST00000595756 ZNF479Q96JC4 524 aa12.24□□□□□ -0.45
HOMER3-208ENST00000595756 RPP21Q9H633 154 aaKnown RBP12.24□□□□□ -0.45
HOMER3-208ENST00000595756 NAT8Q9UHE5 227 aa12.24□□□□□ -0.45
HOMER3-208ENST00000595756 C9JQL5 133 aa12.23□□□□□ -0.45
HOMER3-208ENST00000595756 F2Z2F3 143 aa12.23□□□□□ -0.45
HOMER3-208ENST00000595756 ERVFC1-1P60608 527 aa12.23□□□□□ -0.45
HOMER3-208ENST00000595756 CFAP126Q5VTH2 177 aa12.23□□□□□ -0.45
HOMER3-208ENST00000595756 ZFP2Q6ZN57 461 aa12.23□□□□□ -0.45
HOMER3-208ENST00000595756 GATCO43716 136 aaKnown RBP12.22□□□□□ -0.45
HOMER3-208ENST00000595756 SFTA3P0C7M3 94 aa12.22□□□□□ -0.45
HOMER3-208ENST00000595756 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
HOMER3-208ENST00000595756 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
HOMER3-208ENST00000595756 LYPD5Q6UWN5 251 aa12.22□□□□□ -0.45
HOMER3-208ENST00000595756 NEGR1Q7Z3B1 354 aa12.22□□□□□ -0.45
HOMER3-208ENST00000595756 FER1L6-AS1Q8NA97 138 aa12.22□□□□□ -0.45
HOMER3-208ENST00000595756 RNASE7Q9H1E1 156 aaKnown RBP12.22□□□□□ -0.45
HOMER3-208ENST00000595756 K7EQD1 137 aa12.21□□□□□ -0.45
HOMER3-208ENST00000595756 M0R381 172 aa12.21□□□□□ -0.45
HOMER3-208ENST00000595756 RHODO00212 210 aa12.21□□□□□ -0.45
HOMER3-208ENST00000595756 SRIP30626 198 aa12.21□□□□□ -0.45
HOMER3-208ENST00000595756 CACNG7P62955 275 aa12.21□□□□□ -0.45
HOMER3-208ENST00000595756 CT83Q5H943 113 aa12.21□□□□□ -0.45
HOMER3-208ENST00000595756 C15orf54Q8N8G6 183 aa12.21□□□□□ -0.45
HOMER3-208ENST00000595756 SFRP2Q96HF1 295 aa12.21□□□□□ -0.45
HOMER3-208ENST00000595756 OSTCQ9NRP0 149 aa12.21□□□□□ -0.45
HOMER3-208ENST00000595756 A8MWL6 223 aa12.2□□□□□ -0.46
HOMER3-208ENST00000595756 IGLC6P0CF74 106 aa12.2□□□□□ -0.46
HOMER3-208ENST00000595756 UQCC3Q6UW78 93 aa12.2□□□□□ -0.46
HOMER3-208ENST00000595756 K7EP13 123 aa12.19□□□□□ -0.46
HOMER3-208ENST00000595756 GATA1P15976 413 aaPredicted RBP12.19□□□□□ -0.46
HOMER3-208ENST00000595756 WDR73Q6P4I2 378 aa12.19□□□□□ -0.46
HOMER3-208ENST00000595756 NFE4Q86UQ8 179 aa12.19□□□□□ -0.46
HOMER3-208ENST00000595756 Q8N1X5 172 aa12.19□□□□□ -0.46
HOMER3-208ENST00000595756 OR10AG1Q8NH19 301 aa12.19□□□□□ -0.46
HOMER3-208ENST00000595756 TRBV6-4A0A1B0GX49 114 aa12.18□□□□□ -0.46
HOMER3-208ENST00000595756 GZMBP10144 247 aa12.18□□□□□ -0.46
HOMER3-208ENST00000595756 RPL23P62829 140 aaKnown RBP12.18□□□□□ -0.46
HOMER3-208ENST00000595756 ISOC2Q96AB3 205 aa12.18□□□□□ -0.46
HOMER3-208ENST00000595756 PRADC1Q9BSG0 188 aa12.18□□□□□ -0.46
HOMER3-208ENST00000595756 TPPP3Q9BW30 176 aa12.18□□□□□ -0.46
HOMER3-208ENST00000595756 TRAV9-2A0A087WT02 112 aa12.17□□□□□ -0.46
HOMER3-208ENST00000595756 FAM231BA6NCW3 169 aa12.17□□□□□ -0.46
HOMER3-208ENST00000595756 GYPEP15421 78 aa12.17□□□□□ -0.46
HOMER3-208ENST00000595756 ADIRFQ15847 76 aa12.17□□□□□ -0.46
HOMER3-208ENST00000595756 SH2D6Q7Z4S9 175 aa12.17□□□□□ -0.46
HOMER3-208ENST00000595756 EREGO14944 169 aa12.16□□□□□ -0.46
HOMER3-208ENST00000595756 RHOHQ15669 191 aa12.16□□□□□ -0.46
HOMER3-208ENST00000595756 CDPF1Q6NVV7 123 aa12.16□□□□□ -0.46
HOMER3-208ENST00000595756 LYZL1Q6UWQ5 148 aa12.16□□□□□ -0.46
HOMER3-208ENST00000595756 WFDC10BQ8IUB3 73 aa12.16□□□□□ -0.46
HOMER3-208ENST00000595756 GFRA4Q9GZZ7 299 aa12.16□□□□□ -0.46
HOMER3-208ENST00000595756 IGHV3-73A0A0B4J1V6 119 aa12.15□□□□□ -0.46
HOMER3-208ENST00000595756 DNAH10OSP0CZ25 163 aa12.15□□□□□ -0.46
HOMER3-208ENST00000595756 SMIM17P0DL12 118 aa12.15□□□□□ -0.46
HOMER3-208ENST00000595756 CTRLP40313 264 aa12.15□□□□□ -0.46
HOMER3-208ENST00000595756 PNRC1Q12796 327 aaPredicted RBP12.15□□□□□ -0.46
HOMER3-208ENST00000595756 FAM74A4Q5TZK3 123 aa12.15□□□□□ -0.46
HOMER3-208ENST00000595756 UFSP1Q6NVU6 142 aa12.15□□□□□ -0.46
HOMER3-208ENST00000595756 SLC25A29Q8N8R3 303 aa12.15□□□□□ -0.46
HOMER3-208ENST00000595756 OR10G8Q8NGN5 311 aa12.15□□□□□ -0.46
HOMER3-208ENST00000595756 AP1S3Q96PC3 154 aa12.15□□□□□ -0.46
HOMER3-208ENST00000595756 JPT2Q9H910 190 aa12.15□□□□□ -0.46
HOMER3-208ENST00000595756 FAT1Q14517 4588 aa12.14□□□□□ -0.47
HOMER3-208ENST00000595756 CRYGDP07320 174 aa12.14□□□□□ -0.47
HOMER3-208ENST00000595756 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
HOMER3-208ENST00000595756 FOXA3P55318 350 aaPredicted RBP12.14□□□□□ -0.47
HOMER3-208ENST00000595756 TSKUQ8WUA8 353 aa12.14□□□□□ -0.47
HOMER3-208ENST00000595756 BORCS7Q96B45 105 aa12.14□□□□□ -0.47
HOMER3-208ENST00000595756 CNFNQ9BYD5 112 aa12.14□□□□□ -0.47
HOMER3-208ENST00000595756 SAMD10Q9BYL1 202 aa12.14□□□□□ -0.47
HOMER3-208ENST00000595756 PGPEP1Q9NXJ5 209 aa12.14□□□□□ -0.47
HOMER3-208ENST00000595756 A0A087WWL8 130 aa12.13□□□□□ -0.47
HOMER3-208ENST00000595756 MUC21A0A0G2JKD1 596 aa12.13□□□□□ -0.47
HOMER3-208ENST00000595756 MUC21A0A140T8X8 626 aa12.13□□□□□ -0.47
HOMER3-208ENST00000595756 EVI2AP22794 236 aa12.13□□□□□ -0.47
HOMER3-208ENST00000595756 MSRB1Q9NZV6 116 aa12.13□□□□□ -0.47
HOMER3-208ENST00000595756 LINC00862A6NCI5 91 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms