RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 PTH2Q96A98 100 aa10.62□□□□□ -0.71
USE1-206ENST00000595101 A0A1W2PPQ1 181 aa10.61□□□□□ -0.71
USE1-206ENST00000595101 K7EQD1 137 aa10.61□□□□□ -0.71
USE1-206ENST00000595101 GYPEP15421 78 aa10.61□□□□□ -0.71
USE1-206ENST00000595101 CCL18P55774 89 aa10.61□□□□□ -0.71
USE1-206ENST00000595101 C19orf71A6NCJ1 209 aa10.6□□□□□ -0.71
USE1-206ENST00000595101 M0R381 172 aa10.6□□□□□ -0.71
USE1-206ENST00000595101 GZMBP10144 247 aa10.6□□□□□ -0.71
USE1-206ENST00000595101 SLAQ13239 276 aa10.6□□□□□ -0.71
USE1-206ENST00000595101 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
USE1-206ENST00000595101 PARLQ9H300 379 aa10.6□□□□□ -0.71
USE1-206ENST00000595101 Q9UF83 564 aa10.6□□□□□ -0.71
USE1-206ENST00000595101 ICOSQ9Y6W8 199 aa10.6□□□□□ -0.71
USE1-206ENST00000595101 K7EN84 100 aa10.6□□□□□ -0.71
USE1-206ENST00000595101 UFSP1Q6NVU6 142 aa10.6□□□□□ -0.71
USE1-206ENST00000595101 EIF5A2Q9GZV4 153 aaKnown RBP10.6□□□□□ -0.71
USE1-206ENST00000595101 PHLDA3Q9Y5J5 127 aa10.6□□□□□ -0.71
USE1-206ENST00000595101 OR10AG1Q8NH19 301 aa10.59□□□□□ -0.71
USE1-206ENST00000595101 OCC1Q8TAD7 63 aa10.59□□□□□ -0.71
USE1-206ENST00000595101 FAT2Q9NYQ8 4349 aa10.59□□□□□ -0.71
USE1-206ENST00000595101 A0A087WWL8 130 aa10.58□□□□□ -0.72
USE1-206ENST00000595101 Q6ZR54 194 aa10.58□□□□□ -0.72
USE1-206ENST00000595101 TMEM250H0YL14 139 aa10.57□□□□□ -0.72
USE1-206ENST00000595101 SCO1O75880 301 aa10.57□□□□□ -0.72
USE1-206ENST00000595101 SRSF3P84103 164 aaKnown RBP10.57□□□□□ -0.72
USE1-206ENST00000595101 MRPL23Q16540 153 aaKnown RBP10.57□□□□□ -0.72
USE1-206ENST00000595101 Q9H8V8 135 aa10.57□□□□□ -0.72
USE1-206ENST00000595101 A8MWV9 139 aa10.57□□□□□ -0.72
USE1-206ENST00000595101 C9JQL5 133 aa10.57□□□□□ -0.72
USE1-206ENST00000595101 FAM74A4Q5TZK3 123 aa10.57□□□□□ -0.72
USE1-206ENST00000595101 LYPD5Q6UWN5 251 aa10.57□□□□□ -0.72
USE1-206ENST00000595101 OR2D3Q8NGH3 330 aa10.57□□□□□ -0.72
USE1-206ENST00000595101 DAZAP1Q96EP5 407 aaKnown RBP10.57□□□□□ -0.72
USE1-206ENST00000595101 SSBP4Q9BWG4 385 aaPredicted RBP10.57□□□□□ -0.72
USE1-206ENST00000595101 RNASE7Q9H1E1 156 aaKnown RBP10.57□□□□□ -0.72
USE1-206ENST00000595101 TMEM238C9JI98 176 aa10.56□□□□□ -0.72
USE1-206ENST00000595101 SNAI2O43623 268 aa10.56□□□□□ -0.72
USE1-206ENST00000595101 CRYGDP07320 174 aa10.56□□□□□ -0.72
USE1-206ENST00000595101 PIK3CD-AS1Q5SR53 167 aa10.56□□□□□ -0.72
USE1-206ENST00000595101 NEGR1Q7Z3B1 354 aa10.56□□□□□ -0.72
USE1-206ENST00000595101 NUDT10Q8NFP7 164 aa10.56□□□□□ -0.72
USE1-206ENST00000595101 SMIM12Q96EX1 92 aa10.56□□□□□ -0.72
USE1-206ENST00000595101 NUDT11Q96G61 164 aa10.56□□□□□ -0.72
USE1-206ENST00000595101 SFRP2Q96HF1 295 aa10.56□□□□□ -0.72
USE1-206ENST00000595101 KRTAP1-5Q9BYS1 174 aa10.56□□□□□ -0.72
USE1-206ENST00000595101 NIT2Q9NQR4 276 aa10.56□□□□□ -0.72
USE1-206ENST00000595101 SRP19P09132 144 aaKnown RBP10.55□□□□□ -0.72
USE1-206ENST00000595101 SRIP30626 198 aa10.55□□□□□ -0.72
USE1-206ENST00000595101 FAM3BP58499 235 aaPredicted RBP10.55□□□□□ -0.72
USE1-206ENST00000595101 C14orf178Q8N769 122 aaPredicted RBP10.55□□□□□ -0.72
USE1-206ENST00000595101 SYT8Q8NBV8 401 aa10.55□□□□□ -0.72
USE1-206ENST00000595101 MRPS16Q9Y3D3 137 aaKnown RBP10.55□□□□□ -0.72
USE1-206ENST00000595101 TRBV6-4A0A1B0GX49 114 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 P01737 135 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 CXCL1P09341 107 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 ZFP82Q8N141 532 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 TPPP3Q9BW30 176 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 DNAH17Q9UFH2 4485 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 NBDYA0A0U1RRE5 68 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 RTL8CO15255 209 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 OR5AL1P0C617 328 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 ZFP2Q6ZN57 461 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 C14orf144Q96I85 54 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 UPK3BQ9BT76 320 aa10.54□□□□□ -0.72
USE1-206ENST00000595101 NXPH4O95158 308 aa10.53□□□□□ -0.72
USE1-206ENST00000595101 IGLC6P0CF74 106 aa10.53□□□□□ -0.72
USE1-206ENST00000595101 RHOHQ15669 191 aa10.53□□□□□ -0.72
USE1-206ENST00000595101 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
USE1-206ENST00000595101 BIRC6Q9NR09 4857 aa10.52□□□□□ -0.72
USE1-206ENST00000595101 SPANXN1Q5VSR9 72 aa10.52□□□□□ -0.72
USE1-206ENST00000595101 PRADC1Q9BSG0 188 aa10.52□□□□□ -0.72
USE1-206ENST00000595101 GAGE12JA6NER3 117 aa10.52□□□□□ -0.73
USE1-206ENST00000595101 RBX1P62877 108 aa10.52□□□□□ -0.73
USE1-206ENST00000595101 GAGE4Q13068 117 aa10.52□□□□□ -0.73
USE1-206ENST00000595101 GAGE5Q13069 117 aa10.52□□□□□ -0.73
USE1-206ENST00000595101 GAGE13Q4V321 117 aa10.52□□□□□ -0.73
USE1-206ENST00000595101 CLLU1Q5K131 121 aa10.52□□□□□ -0.73
USE1-206ENST00000595101 FER1L6-AS1Q8NA97 138 aa10.52□□□□□ -0.73
USE1-206ENST00000595101 SMIM7Q9BQ49 75 aa10.52□□□□□ -0.73
USE1-206ENST00000595101 HECTD4Q9Y4D8 3996 aa10.52□□□□□ -0.73
USE1-206ENST00000595101 PPBPP02775 128 aa10.51□□□□□ -0.73
USE1-206ENST00000595101 WFDC10BQ8IUB3 73 aa10.51□□□□□ -0.73
USE1-206ENST00000595101 LYZL1Q6UWQ5 148 aa10.5□□□□□ -0.73
USE1-206ENST00000595101 LINC01551Q86U37 167 aa10.5□□□□□ -0.73
USE1-206ENST00000595101 RPP21Q9H633 154 aaKnown RBP10.5□□□□□ -0.73
USE1-206ENST00000595101 ZNF727A8MUV8 499 aa10.49□□□□□ -0.73
USE1-206ENST00000595101 RPS20P60866 119 aaKnown RBP10.49□□□□□ -0.73
USE1-206ENST00000595101 RHODO00212 210 aa10.49□□□□□ -0.73
USE1-206ENST00000595101 SIVA1O15304 175 aa10.49□□□□□ -0.73
USE1-206ENST00000595101 GTSF1Q8WW33 167 aa10.49□□□□□ -0.73
USE1-206ENST00000595101 KIF25-AS1Q9Y6Z4 181 aa10.49□□□□□ -0.73
USE1-206ENST00000595101 LINC00694P0DN24 101 aa10.48□□□□□ -0.73
USE1-206ENST00000595101 LINC00315P59091 139 aa10.48□□□□□ -0.73
USE1-206ENST00000595101 C1orf134Q5TEV5 83 aa10.48□□□□□ -0.73
USE1-206ENST00000595101 ATP6V0E2Q8NHE4 81 aa10.47□□□□□ -0.73
USE1-206ENST00000595101 TNFRSF18Q9Y5U5 241 aa10.47□□□□□ -0.73
USE1-206ENST00000595101 DLEU1O43261 78 aa10.47□□□□□ -0.73
USE1-206ENST00000595101 NTF3P20783 257 aa10.47□□□□□ -0.73
USE1-206ENST00000595101 ERVFC1-1P60608 527 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms