RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 GRIFINA4D1Z8 144 aa6.33□□□□□ -1.4
NOTCH3-202ENST00000595045 FABP5P3A8MUU1 101 aa6.33□□□□□ -1.4
NOTCH3-202ENST00000595045 M0R036 132 aa6.33□□□□□ -1.4
NOTCH3-202ENST00000595045 CIDEAO60543 219 aa6.33□□□□□ -1.4
NOTCH3-202ENST00000595045 MGST1P10620 155 aaKnown RBP6.33□□□□□ -1.4
NOTCH3-202ENST00000595045 SAMD10Q9BYL1 202 aa6.33□□□□□ -1.4
NOTCH3-202ENST00000595045 PARLQ9H300 379 aa6.33□□□□□ -1.4
NOTCH3-202ENST00000595045 CTXND1A0A1B0GTU2 59 aa6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 B4DEV8 164 aa6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 H3BVH4 76 aa6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 PEX7O00628 323 aa6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 IGLV2-8P01709 118 aa6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 GIPP09681 153 aaPredicted RBP6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 ASIPP42127 132 aa6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 CRIP1P50238 77 aa6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 AKR1C8PQ5T2L2 129 aa6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 DMRTA1Q5VZB9 504 aa6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 C14orf178Q8N769 122 aaPredicted RBP6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 TM2D2Q9BX73 214 aa6.32□□□□□ -1.4
NOTCH3-202ENST00000595045 TMSB15BA0A087X1C1 80 aa6.31□□□□□ -1.4
NOTCH3-202ENST00000595045 FAM74A7A6NL05 159 aa6.31□□□□□ -1.4
NOTCH3-202ENST00000595045 A8MWV9 139 aa6.31□□□□□ -1.4
NOTCH3-202ENST00000595045 ARMS2P0C7Q2 107 aa6.31□□□□□ -1.4
NOTCH3-202ENST00000595045 RPL37AP61513 92 aaKnown RBP6.31□□□□□ -1.4
NOTCH3-202ENST00000595045 FAM74A4Q5TZK3 123 aa6.31□□□□□ -1.4
NOTCH3-202ENST00000595045 DAZAP1Q96EP5 407 aaKnown RBP6.31□□□□□ -1.4
NOTCH3-202ENST00000595045 A0A087WWL8 130 aa6.3□□□□□ -1.4
NOTCH3-202ENST00000595045 TRAV8-3A0A0A6YYJ7 113 aa6.3□□□□□ -1.4
NOTCH3-202ENST00000595045 SMLR1H3BR10 107 aa6.3□□□□□ -1.4
NOTCH3-202ENST00000595045 ARPC5O15511 151 aa6.3□□□□□ -1.4
NOTCH3-202ENST00000595045 SH2D1AO60880 128 aa6.3□□□□□ -1.4
NOTCH3-202ENST00000595045 ZFP2Q6ZN57 461 aa6.3□□□□□ -1.4
NOTCH3-202ENST00000595045 Q86TA4 180 aa6.3□□□□□ -1.4
NOTCH3-202ENST00000595045 ZC2HC1AQ96GY0 325 aa6.3□□□□□ -1.4
NOTCH3-202ENST00000595045 BOLA1Q9Y3E2 137 aa6.3□□□□□ -1.4
NOTCH3-202ENST00000595045 A0A1B0GV50 99 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 MAP1LC3B2A6NCE7 125 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 RBFOX3A6NFN3 312 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 KRBOX1C9JBD0 128 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 M0R381 172 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 UBE2G1P62253 170 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 CST9LP1Q5W188 147 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 ATRAIDQ6UW56 229 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 NIT1Q86X76 327 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 HIST1H2BAQ96A08 127 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 MAP1LC3BQ9GZQ8 125 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 IL36BQ9NZH7 164 aa6.29□□□□□ -1.4
NOTCH3-202ENST00000595045 G3V3Q6 166 aa6.28□□□□□ -1.4
NOTCH3-202ENST00000595045 FHITP49789 147 aa6.28□□□□□ -1.4
NOTCH3-202ENST00000595045 PIK3CD-AS1Q5SR53 167 aa6.28□□□□□ -1.4
NOTCH3-202ENST00000595045 OR11H4Q8NGC9 324 aa6.28□□□□□ -1.4
NOTCH3-202ENST00000595045 NKX6-2Q9C056 277 aaPredicted RBP6.28□□□□□ -1.4
NOTCH3-202ENST00000595045 CYTL1Q9NRR1 136 aa6.28□□□□□ -1.4
NOTCH3-202ENST00000595045 ZFP30Q9Y2G7 519 aa6.28□□□□□ -1.4
NOTCH3-202ENST00000595045 PHLDA3Q9Y5J5 127 aa6.28□□□□□ -1.4
NOTCH3-202ENST00000595045 TPT1P13693 172 aaKnown RBP6.27□□□□□ -1.41
NOTCH3-202ENST00000595045 AKR1C3P42330 323 aa6.27□□□□□ -1.41
NOTCH3-202ENST00000595045 SSTP61278 116 aa6.27□□□□□ -1.41
NOTCH3-202ENST00000595045 FAM162BQ5T6X4 162 aa6.27□□□□□ -1.41
NOTCH3-202ENST00000595045 Q8N976 141 aa6.27□□□□□ -1.41
NOTCH3-202ENST00000595045 SFRP2Q96HF1 295 aa6.27□□□□□ -1.41
NOTCH3-202ENST00000595045 KLK12Q9UKR0 248 aa6.27□□□□□ -1.41
NOTCH3-202ENST00000595045 URGCP-MRPS24S4R325 110 aa6.27□□□□□ -1.41
NOTCH3-202ENST00000595045 IGKV2D-24A0A075B6R9 120 aa6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 A0A087WWC5 75 aa6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 PANO1I0J062 215 aa6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 RHODO00212 210 aa6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 PAGE4O60829 102 aa6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 RPL19P84098 196 aaKnown RBP6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 IFITM2Q01629 132 aa6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 ZNF674Q2M3X9 581 aa6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 TOR2AQ5JU69 321 aa6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 ENHOQ6UWT2 76 aa6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 STOML3Q8TAV4 291 aa6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 FMC1Q96HJ9 113 aa6.26□□□□□ -1.41
NOTCH3-202ENST00000595045 MUC21A0A0G2JKD1 596 aa6.25□□□□□ -1.41
NOTCH3-202ENST00000595045 MUC21A0A140T8X8 626 aa6.25□□□□□ -1.41
NOTCH3-202ENST00000595045 TMEM262E9PQX1 116 aa6.25□□□□□ -1.41
NOTCH3-202ENST00000595045 LTAP01374 205 aa6.25□□□□□ -1.41
NOTCH3-202ENST00000595045 LINC01559Q495D7 138 aa6.25□□□□□ -1.41
NOTCH3-202ENST00000595045 DNLZQ5SXM8 178 aa6.25□□□□□ -1.41
NOTCH3-202ENST00000595045 KRTAP26-1Q6PEX3 210 aa6.25□□□□□ -1.41
NOTCH3-202ENST00000595045 ZFP82Q8N141 532 aa6.25□□□□□ -1.41
NOTCH3-202ENST00000595045 SFT2D1Q8WV19 159 aa6.25□□□□□ -1.41
NOTCH3-202ENST00000595045 UBE2WQ96B02 151 aa6.25□□□□□ -1.41
NOTCH3-202ENST00000595045 COX11Q9Y6N1 276 aa6.25□□□□□ -1.41
NOTCH3-202ENST00000595045 A0A087WX48 190 aa6.24□□□□□ -1.41
NOTCH3-202ENST00000595045 RPL36AP83881 106 aaKnown RBP6.24□□□□□ -1.41
NOTCH3-202ENST00000595045 KCNIP4Q6PIL6 250 aa6.24□□□□□ -1.41
NOTCH3-202ENST00000595045 Q6ZRU5 148 aa6.24□□□□□ -1.41
NOTCH3-202ENST00000595045 COX8CQ7Z4L0 72 aa6.24□□□□□ -1.41
NOTCH3-202ENST00000595045 TCTE3Q8IZS6 198 aa6.24□□□□□ -1.41
NOTCH3-202ENST00000595045 FAM213BQ8TBF2 198 aa6.24□□□□□ -1.41
NOTCH3-202ENST00000595045 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
NOTCH3-202ENST00000595045 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
NOTCH3-202ENST00000595045 TRBV6-1A0A0K0K1D8 114 aa6.23□□□□□ -1.41
NOTCH3-202ENST00000595045 SCO2A0A1W2PP80 73 aa6.23□□□□□ -1.41
NOTCH3-202ENST00000595045 UBE2D3P61077 147 aa6.23□□□□□ -1.41
NOTCH3-202ENST00000595045 UBE2D2P62837 147 aa6.23□□□□□ -1.41
NOTCH3-202ENST00000595045 ZNF56Q15929 161 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms