RNA–Protein interactions for RNA: ENST00000594693.5

ZNF548-204, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-204ENST00000594693 SEC11CQ9BY50 192 aa12.31□□□□□ -0.44
ZNF548-204ENST00000594693 MSRB1Q9NZV6 116 aa12.31□□□□□ -0.44
ZNF548-204ENST00000594693 A0A087WWL8 130 aa12.3□□□□□ -0.44
ZNF548-204ENST00000594693 F8W036 122 aa12.3□□□□□ -0.44
ZNF548-204ENST00000594693 RHODO00212 210 aa12.3□□□□□ -0.44
ZNF548-204ENST00000594693 NTF3P20783 257 aa12.3□□□□□ -0.44
ZNF548-204ENST00000594693 Q6ZSN1 163 aa12.3□□□□□ -0.44
ZNF548-204ENST00000594693 TRBV6-4A0A1B0GX49 114 aa12.29□□□□□ -0.44
ZNF548-204ENST00000594693 C10orf91Q5T1B1 145 aa12.29□□□□□ -0.44
ZNF548-204ENST00000594693 SLC25A29Q8N8R3 303 aa12.29□□□□□ -0.44
ZNF548-204ENST00000594693 PGLYRP4Q96LB8 373 aa12.29□□□□□ -0.44
ZNF548-204ENST00000594693 KIF25-AS1Q9Y6Z4 181 aa12.29□□□□□ -0.44
ZNF548-204ENST00000594693 HIGD1CA8MV81 97 aa12.28□□□□□ -0.44
ZNF548-204ENST00000594693 NUDT3O95989 172 aa12.28□□□□□ -0.44
ZNF548-204ENST00000594693 C14orf178Q8N769 122 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-204ENST00000594693 KMT2CQ8NEZ4 4911 aaKnown RBP12.28□□□□□ -0.44
ZNF548-204ENST00000594693 A0A096LPF7 62 aa12.27□□□□□ -0.45
ZNF548-204ENST00000594693 SMIM27A0A1W2PRY6 76 aa12.27□□□□□ -0.45
ZNF548-204ENST00000594693 PPP1R2P9O14990 202 aa12.27□□□□□ -0.45
ZNF548-204ENST00000594693 LINC00315P59091 139 aa12.27□□□□□ -0.45
ZNF548-204ENST00000594693 FAM74A4Q5TZK3 123 aa12.27□□□□□ -0.45
ZNF548-204ENST00000594693 LGALS9CQ6DKI2 356 aa12.27□□□□□ -0.45
ZNF548-204ENST00000594693 MT-ND4LP03901 98 aa12.26□□□□□ -0.45
ZNF548-204ENST00000594693 TWIST1Q15672 202 aa12.26□□□□□ -0.45
ZNF548-204ENST00000594693 RNF212Q495C1 297 aa12.26□□□□□ -0.45
ZNF548-204ENST00000594693 NUP35Q8NFH5 326 aa12.26□□□□□ -0.45
ZNF548-204ENST00000594693 LINC00476Q8WZB0 136 aa12.26□□□□□ -0.45
ZNF548-204ENST00000594693 AP1S3Q96PC3 154 aa12.26□□□□□ -0.45
ZNF548-204ENST00000594693 LCE6AA0A183 80 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 K7EQD1 137 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 GYPEP15421 78 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 EVI2AP22794 236 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 RAB4BP61018 213 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 RHOHQ15669 191 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 MRPL23Q16540 153 aaKnown RBP12.25□□□□□ -0.45
ZNF548-204ENST00000594693 ANAPC16Q96DE5 110 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 PRADC1Q9BSG0 188 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 NAT8BQ9UHF3 227 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 CARHSP1Q9Y2V2 147 aaKnown RBP12.25□□□□□ -0.45
ZNF548-204ENST00000594693 ICOSQ9Y6W8 199 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 DNAH1Q9P2D7 4330 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 SACSQ9NZJ4 4579 aa12.25□□□□□ -0.45
ZNF548-204ENST00000594693 LOC100131303A0A0U1RQF7 123 aa12.24□□□□□ -0.45
ZNF548-204ENST00000594693 A0A1B0GUT8 65 aa12.24□□□□□ -0.45
ZNF548-204ENST00000594693 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
ZNF548-204ENST00000594693 SMIM17P0DL12 118 aa12.24□□□□□ -0.45
ZNF548-204ENST00000594693 P0DMU3 169 aa12.24□□□□□ -0.45
ZNF548-204ENST00000594693 FAM231AP0DMU4 169 aa12.24□□□□□ -0.45
ZNF548-204ENST00000594693 FAM231CP0DMU5 169 aa12.24□□□□□ -0.45
ZNF548-204ENST00000594693 VPS13DQ5THJ4 4388 aa12.24□□□□□ -0.45
ZNF548-204ENST00000594693 BORCS7Q96B45 105 aa12.23□□□□□ -0.45
ZNF548-204ENST00000594693 Q9UF83 564 aa12.23□□□□□ -0.45
ZNF548-204ENST00000594693 LYSTQ99698 3801 aa12.22□□□□□ -0.45
ZNF548-204ENST00000594693 LY6G6CO95867 125 aa12.22□□□□□ -0.45
ZNF548-204ENST00000594693 ESRGQ1W209 222 aa12.22□□□□□ -0.45
ZNF548-204ENST00000594693 DPH3P1Q9H4G8 78 aa12.22□□□□□ -0.45
ZNF548-204ENST00000594693 NEGR1Q7Z3B1 354 aa12.21□□□□□ -0.45
ZNF548-204ENST00000594693 SH2D6Q7Z4S9 175 aa12.21□□□□□ -0.45
ZNF548-204ENST00000594693 ALMS1Q8TCU4 4167 aa12.21□□□□□ -0.45
ZNF548-204ENST00000594693 TRBV10-1A0A0K0K1A3 114 aa12.2□□□□□ -0.46
ZNF548-204ENST00000594693 F5H697 171 aa12.2□□□□□ -0.46
ZNF548-204ENST00000594693 SRIP30626 198 aa12.2□□□□□ -0.46
ZNF548-204ENST00000594693 CCL18P55774 89 aa12.2□□□□□ -0.46
ZNF548-204ENST00000594693 RIGQ13278 110 aa12.2□□□□□ -0.46
ZNF548-204ENST00000594693 ZNF56Q15929 161 aa12.2□□□□□ -0.46
ZNF548-204ENST00000594693 LYPD5Q6UWN5 251 aa12.19□□□□□ -0.46
ZNF548-204ENST00000594693 SMIM15Q7Z3B0 74 aa12.19□□□□□ -0.46
ZNF548-204ENST00000594693 SLC7A5P1Q8MH63 180 aa12.19□□□□□ -0.46
ZNF548-204ENST00000594693 CTDSP1Q9GZU7 261 aa12.19□□□□□ -0.46
ZNF548-204ENST00000594693 LINC00588Q9Y4M8 146 aa12.19□□□□□ -0.46
ZNF548-204ENST00000594693 M0QY20 66 aa12.18□□□□□ -0.46
ZNF548-204ENST00000594693 LINC00694P0DN24 101 aa12.18□□□□□ -0.46
ZNF548-204ENST00000594693 FAM3BP58499 235 aaPredicted RBP12.18□□□□□ -0.46
ZNF548-204ENST00000594693 CLRN3Q8NCR9 226 aa12.18□□□□□ -0.46
ZNF548-204ENST00000594693 TMEM191AQ9H0A3 160 aa12.18□□□□□ -0.46
ZNF548-204ENST00000594693 C7orf77A4D0Y5 90 aa12.17□□□□□ -0.46
ZNF548-204ENST00000594693 GAGE12JA6NER3 117 aa12.17□□□□□ -0.46
ZNF548-204ENST00000594693 MGPP08493 103 aa12.17□□□□□ -0.46
ZNF548-204ENST00000594693 GAGE1Q13065 139 aa12.17□□□□□ -0.46
ZNF548-204ENST00000594693 GAGE4Q13068 117 aa12.17□□□□□ -0.46
ZNF548-204ENST00000594693 GAGE5Q13069 117 aa12.17□□□□□ -0.46
ZNF548-204ENST00000594693 GAGE13Q4V321 117 aa12.17□□□□□ -0.46
ZNF548-204ENST00000594693 SUMO4Q6EEV6 95 aa12.17□□□□□ -0.46
ZNF548-204ENST00000594693 IMMP2LQ96T52 175 aa12.17□□□□□ -0.46
ZNF548-204ENST00000594693 TMEM242Q9NWH2 141 aa12.17□□□□□ -0.46
ZNF548-204ENST00000594693 A0A1B0GW15 77 aa12.16□□□□□ -0.46
ZNF548-204ENST00000594693 TIRAPP58753 221 aa12.16□□□□□ -0.46
ZNF548-204ENST00000594693 NDUFA5Q16718 116 aa12.16□□□□□ -0.46
ZNF548-204ENST00000594693 UBE2DNLQ8IWF7 75 aa12.16□□□□□ -0.46
ZNF548-204ENST00000594693 NEXN-AS1Q8NBZ9 246 aa12.16□□□□□ -0.46
ZNF548-204ENST00000594693 ZNRF2Q8NHG8 242 aa12.16□□□□□ -0.46
ZNF548-204ENST00000594693 TRBV7-3A0A075B6L6 115 aa12.15□□□□□ -0.46
ZNF548-204ENST00000594693 A0A087WWC5 75 aa12.15□□□□□ -0.46
ZNF548-204ENST00000594693 A0A1B0GXF2 115 aa12.15□□□□□ -0.46
ZNF548-204ENST00000594693 APOC3P02656 99 aa12.15□□□□□ -0.46
ZNF548-204ENST00000594693 ATP6V0E2Q8NHE4 81 aa12.15□□□□□ -0.46
ZNF548-204ENST00000594693 MRPS16Q9Y3D3 137 aaKnown RBP12.15□□□□□ -0.46
ZNF548-204ENST00000594693 RYR2Q92736 4967 aa12.15□□□□□ -0.46
ZNF548-204ENST00000594693 H7C1H1 209 aa12.14□□□□□ -0.47
ZNF548-204ENST00000594693 RPL36AP83881 106 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms