RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 TMEM75Q8N9X5 138 aa11.73□□□□□ -0.53
PNKP-204ENST00000594661 CCDC140Q96MF4 163 aa11.73□□□□□ -0.53
PNKP-204ENST00000594661 IGHV3OR16-8A0A075B7F1 116 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 M0R3E3 92 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 BLCAPP62952 87 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 PDE6HQ13956 83 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 MEIG1Q5JSS6 88 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 LYZL1Q6UWQ5 148 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 Q6ZS46 218 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 RASL10AQ92737 203 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 PSMG3-AS1Q96PY0 264 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 TPPP3Q9BW30 176 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 AAMDCQ9H7C9 122 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 LINC01549A6NIU2 74 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 RPL7P18124 248 aaKnown RBP11.72□□□□□ -0.53
PNKP-204ENST00000594661 CRIP1P50238 77 aa11.72□□□□□ -0.53
PNKP-204ENST00000594661 SMKR1H3BMG3 65 aa11.71□□□□□ -0.53
PNKP-204ENST00000594661 IGHG2P01859 326 aa11.71□□□□□ -0.53
PNKP-204ENST00000594661 ASCL2Q99929 193 aa11.71□□□□□ -0.53
PNKP-204ENST00000594661 TMEM160Q9NX00 188 aa11.71□□□□□ -0.53
PNKP-204ENST00000594661 MRPL35Q9NZE8 188 aaKnown RBP11.71□□□□□ -0.53
PNKP-204ENST00000594661 LOC107984156A0A0G2JMH3 177 aa11.71□□□□□ -0.54
PNKP-204ENST00000594661 CRLF1O75462 422 aa11.71□□□□□ -0.54
PNKP-204ENST00000594661 IGHV4-59P01825 116 aa11.71□□□□□ -0.54
PNKP-204ENST00000594661 IGF1P05019 195 aa11.71□□□□□ -0.54
PNKP-204ENST00000594661 ARL17AQ8IVW1 177 aa11.71□□□□□ -0.54
PNKP-204ENST00000594661 NXT2Q9NPJ8 142 aaKnown RBP11.71□□□□□ -0.54
PNKP-204ENST00000594661 CSDC2Q9Y534 153 aaKnown RBP11.71□□□□□ -0.54
PNKP-204ENST00000594661 TCL1BO95988 128 aa11.7□□□□□ -0.54
PNKP-204ENST00000594661 FSHBP01225 129 aa11.7□□□□□ -0.54
PNKP-204ENST00000594661 CLEC19AQ6UXS0 136 aa11.7□□□□□ -0.54
PNKP-204ENST00000594661 OR10J6PQ8NGY7 276 aa11.69□□□□□ -0.54
PNKP-204ENST00000594661 EEF1AKMT3Q96AZ1 226 aa11.69□□□□□ -0.54
PNKP-204ENST00000594661 HELZ2Q9BYK8 2649 aaKnown RBP11.69□□□□□ -0.54
PNKP-204ENST00000594661 PLNP26678 52 aa11.69□□□□□ -0.54
PNKP-204ENST00000594661 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
PNKP-204ENST00000594661 CREBBPQ92793 2442 aa11.68□□□□□ -0.54
PNKP-204ENST00000594661 TRBV7-1A0A0A6YYK4 115 aa11.68□□□□□ -0.54
PNKP-204ENST00000594661 TRGV3P03979 118 aa11.68□□□□□ -0.54
PNKP-204ENST00000594661 SMAD5-AS1Q9Y6J3 95 aa11.68□□□□□ -0.54
PNKP-204ENST00000594661 PRRC2AP48634 2157 aaKnown RBP11.67□□□□□ -0.54
PNKP-204ENST00000594661 TEX15Q9BXT5 2789 aa11.67□□□□□ -0.54
PNKP-204ENST00000594661 FAM223BA6NKX1 122 aa11.67□□□□□ -0.54
PNKP-204ENST00000594661 TMEM78Q5T7P6 136 aa11.67□□□□□ -0.54
PNKP-204ENST00000594661 FAM223AQ8IWN6 122 aa11.67□□□□□ -0.54
PNKP-204ENST00000594661 MXRA5Q9NR99 2828 aa11.67□□□□□ -0.54
PNKP-204ENST00000594661 LGALS1P09382 135 aaKnown RBP11.66□□□□□ -0.54
PNKP-204ENST00000594661 CD7P09564 240 aa11.66□□□□□ -0.54
PNKP-204ENST00000594661 SCGB1C2P0DMR2 95 aa11.66□□□□□ -0.54
PNKP-204ENST00000594661 WFDC11Q8NEX6 87 aa11.66□□□□□ -0.54
PNKP-204ENST00000594661 DNAJC30Q96LL9 226 aa11.66□□□□□ -0.54
PNKP-204ENST00000594661 IGKV2-40A0A087WW87 121 aaPredicted RBP11.66□□□□□ -0.54
PNKP-204ENST00000594661 TMSB15BA0A087X1C1 80 aa11.66□□□□□ -0.54
PNKP-204ENST00000594661 TRAV8-2A0A0B4J237 113 aa11.66□□□□□ -0.54
PNKP-204ENST00000594661 WIPF1O43516 503 aa11.66□□□□□ -0.54
PNKP-204ENST00000594661 IGKV2D-40P01614 121 aaPredicted RBP11.66□□□□□ -0.54
PNKP-204ENST00000594661 RNF185Q96GF1 192 aa11.66□□□□□ -0.54
PNKP-204ENST00000594661 C8orf49Q96NF6 230 aa11.66□□□□□ -0.54
PNKP-204ENST00000594661 LINC01587Q99440 93 aa11.66□□□□□ -0.54
PNKP-204ENST00000594661 IGFL4Q6B9Z1 124 aa11.65□□□□□ -0.54
PNKP-204ENST00000594661 Q6ZQT7 251 aa11.65□□□□□ -0.54
PNKP-204ENST00000594661 ITPR3Q14573 2671 aa11.65□□□□□ -0.54
PNKP-204ENST00000594661 CLPSL1A2RUU4 121 aa11.65□□□□□ -0.55
PNKP-204ENST00000594661 C9orf139Q6ZV77 190 aa11.65□□□□□ -0.55
PNKP-204ENST00000594661 KLK15Q9H2R5 256 aa11.65□□□□□ -0.55
PNKP-204ENST00000594661 PDZD2O15018 2839 aa11.64□□□□□ -0.55
PNKP-204ENST00000594661 IGHV3-66A0A0C4DH42 116 aa11.64□□□□□ -0.55
PNKP-204ENST00000594661 H3BVH4 76 aa11.64□□□□□ -0.55
PNKP-204ENST00000594661 BUB3O43684 328 aa11.64□□□□□ -0.55
PNKP-204ENST00000594661 Q8N8P6 123 aa11.64□□□□□ -0.55
PNKP-204ENST00000594661 ODF3Q96PU9 254 aa11.64□□□□□ -0.55
PNKP-204ENST00000594661 IGLV2-18A0A075B6J9 118 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 TNFRSF6BO95407 300 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 TRBV12-3P01733 135 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 HLA-DMBP28068 263 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 CFHR3Q02985 330 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 SFTA2Q6UW10 78 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 NDUFA11Q86Y39 141 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 H3BUA1 57 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 SLC25A20O43772 301 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 PF4V1P10720 104 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 MRPL23Q16540 153 aaKnown RBP11.63□□□□□ -0.55
PNKP-204ENST00000594661 Q6YL49 198 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 AKAP9Q99996 3911 aa11.63□□□□□ -0.55
PNKP-204ENST00000594661 IGHV3OR16-13A0A075B7E8 117 aa11.62□□□□□ -0.55
PNKP-204ENST00000594661 IGHV3-74A0A0B4J1X5 117 aa11.62□□□□□ -0.55
PNKP-204ENST00000594661 TRAV12-1A0A0B4J245 112 aa11.62□□□□□ -0.55
PNKP-204ENST00000594661 IGLV1-40P01703 118 aa11.62□□□□□ -0.55
PNKP-204ENST00000594661 MYOZ3Q8TDC0 251 aa11.62□□□□□ -0.55
PNKP-204ENST00000594661 IGHV3-49A0A0A0MS15 119 aa11.62□□□□□ -0.55
PNKP-204ENST00000594661 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
PNKP-204ENST00000594661 IGLC6P0CF74 106 aa11.62□□□□□ -0.55
PNKP-204ENST00000594661 METTL26Q96S19 204 aa11.62□□□□□ -0.55
PNKP-204ENST00000594661 F8VRH5 84 aa11.61□□□□□ -0.55
PNKP-204ENST00000594661 SH2D1AO60880 128 aa11.61□□□□□ -0.55
PNKP-204ENST00000594661 COX8CQ7Z4L0 72 aa11.61□□□□□ -0.55
PNKP-204ENST00000594661 C15orf53Q8NAA6 179 aa11.61□□□□□ -0.55
PNKP-204ENST00000594661 Q8TAT8 98 aa11.61□□□□□ -0.55
PNKP-204ENST00000594661 H7C1H1 209 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms