RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CSN1S1P47710 185 aa14.33□□□□□ -0.11
LSM4-203ENST00000593829 SEC11AP67812 179 aa14.33□□□□□ -0.11
LSM4-203ENST00000593829 HLA-DMBP28068 263 aa14.33□□□□□ -0.12
LSM4-203ENST00000593829 ZNF493Q6ZR52 646 aa14.33□□□□□ -0.12
LSM4-203ENST00000593829 OR10AG1Q8NH19 301 aa14.33□□□□□ -0.12
LSM4-203ENST00000593829 WWC2-AS2Q96NR7 200 aa14.33□□□□□ -0.12
LSM4-203ENST00000593829 TRBV19A0A075B6N1 114 aa14.32□□□□□ -0.12
LSM4-203ENST00000593829 CLUHP3Q96NS8 147 aa14.32□□□□□ -0.12
LSM4-203ENST00000593829 CST9LQ9H4G1 147 aa14.32□□□□□ -0.12
LSM4-203ENST00000593829 IGKV3-20P01619 116 aa14.31□□□□□ -0.12
LSM4-203ENST00000593829 GIG44P09565 113 aaPredicted RBP14.31□□□□□ -0.12
LSM4-203ENST00000593829 C2orf91Q6ZV80 131 aa14.31□□□□□ -0.12
LSM4-203ENST00000593829 GOLT1AQ6ZVE7 132 aa14.31□□□□□ -0.12
LSM4-203ENST00000593829 PRNTQ86SH4 94 aa14.31□□□□□ -0.12
LSM4-203ENST00000593829 TP73-AS1Q9UF72 201 aa14.31□□□□□ -0.12
LSM4-203ENST00000593829 PDE6HQ13956 83 aa14.31□□□□□ -0.12
LSM4-203ENST00000593829 STAB2Q8WWQ8 2551 aa14.3□□□□□ -0.12
LSM4-203ENST00000593829 TRAV8-1A0A0A6YYK1 113 aa14.3□□□□□ -0.12
LSM4-203ENST00000593829 K7EQM0 130 aa14.3□□□□□ -0.12
LSM4-203ENST00000593829 DUSP14O95147 198 aaKnown RBP14.3□□□□□ -0.12
LSM4-203ENST00000593829 OCIAD2Q56VL3 154 aa14.3□□□□□ -0.12
LSM4-203ENST00000593829 ZC2HC1AQ96GY0 325 aa14.3□□□□□ -0.12
LSM4-203ENST00000593829 C1QTNF4Q9BXJ3 329 aa14.3□□□□□ -0.12
LSM4-203ENST00000593829 ARMS2P0C7Q2 107 aa14.29□□□□□ -0.12
LSM4-203ENST00000593829 ZNF138P52744 262 aa14.29□□□□□ -0.12
LSM4-203ENST00000593829 PSG9Q00887 426 aa14.29□□□□□ -0.12
LSM4-203ENST00000593829 FA2HQ7L5A8 372 aa14.29□□□□□ -0.12
LSM4-203ENST00000593829 AMMECR1LQ6DCA0 310 aa14.29□□□□□ -0.12
LSM4-203ENST00000593829 PSG8Q9UQ74 426 aa14.29□□□□□ -0.12
LSM4-203ENST00000593829 LGALS9BQ3B8N2 356 aa14.28□□□□□ -0.12
LSM4-203ENST00000593829 LGALS9CQ6DKI2 356 aa14.28□□□□□ -0.12
LSM4-203ENST00000593829 EXOC3-AS1Q8N2X6 119 aa14.28□□□□□ -0.12
LSM4-203ENST00000593829 OR8A1Q8NGG7 326 aa14.28□□□□□ -0.12
LSM4-203ENST00000593829 A8MTW9 85 aa14.27□□□□□ -0.12
LSM4-203ENST00000593829 FGF6P10767 208 aa14.27□□□□□ -0.12
LSM4-203ENST00000593829 EDA2RQ9HAV5 297 aa14.27□□□□□ -0.12
LSM4-203ENST00000593829 XCL2Q9UBD3 114 aa14.27□□□□□ -0.12
LSM4-203ENST00000593829 SERTM2A0A1B0GWG4 89 aa14.27□□□□□ -0.13
LSM4-203ENST00000593829 TMEM97Q5BJF2 176 aa14.27□□□□□ -0.13
LSM4-203ENST00000593829 COX8CQ7Z4L0 72 aa14.27□□□□□ -0.13
LSM4-203ENST00000593829 PRSS3P2Q8NHM4 247 aa14.27□□□□□ -0.13
LSM4-203ENST00000593829 CBY3A6NI87 242 aa14.26□□□□□ -0.13
LSM4-203ENST00000593829 SIVA1O15304 175 aa14.26□□□□□ -0.13
LSM4-203ENST00000593829 OR11H2Q8NH07 326 aa14.26□□□□□ -0.13
LSM4-203ENST00000593829 MRPL53Q96EL3 112 aaKnown RBP14.26□□□□□ -0.13
LSM4-203ENST00000593829 AAMDCQ9H7C9 122 aa14.26□□□□□ -0.13
LSM4-203ENST00000593829 FXYD7P58549 80 aa14.25□□□□□ -0.13
LSM4-203ENST00000593829 AMTNQ6UX39 209 aa14.25□□□□□ -0.13
LSM4-203ENST00000593829 SMIM15Q7Z3B0 74 aa14.25□□□□□ -0.13
LSM4-203ENST00000593829 CSNK1G2-AS1Q8NCQ2 148 aa14.25□□□□□ -0.13
LSM4-203ENST00000593829 A0A096LNJ9 63 aa14.25□□□□□ -0.13
LSM4-203ENST00000593829 TRAV8-6A0A0B4J262 113 aa14.25□□□□□ -0.13
LSM4-203ENST00000593829 PRB4P10163 310 aaPredicted RBP14.25□□□□□ -0.13
LSM4-203ENST00000593829 CRIP1P50238 77 aa14.25□□□□□ -0.13
LSM4-203ENST00000593829 C7orf71A4D174 169 aa14.24□□□□□ -0.13
LSM4-203ENST00000593829 PRAC2D3DTV9 90 aa14.24□□□□□ -0.13
LSM4-203ENST00000593829 H3BRM9 83 aa14.24□□□□□ -0.13
LSM4-203ENST00000593829 K7ERU9 68 aa14.24□□□□□ -0.13
LSM4-203ENST00000593829 BOD1L2Q8IYS8 172 aa14.24□□□□□ -0.13
LSM4-203ENST00000593829 OR10J6PQ8NGY7 276 aa14.24□□□□□ -0.13
LSM4-203ENST00000593829 NCR2O95944 276 aa14.23□□□□□ -0.13
LSM4-203ENST00000593829 GAGE12BA1L429 117 aa14.23□□□□□ -0.13
LSM4-203ENST00000593829 FBLL1A6NHQ2 334 aaKnown RBP14.23□□□□□ -0.13
LSM4-203ENST00000593829 M0R3E3 92 aa14.23□□□□□ -0.13
LSM4-203ENST00000593829 RNF151Q2KHN1 245 aa14.23□□□□□ -0.13
LSM4-203ENST00000593829 FAM104BQ5XKR9 115 aa14.23□□□□□ -0.13
LSM4-203ENST00000593829 UFSP1Q6NVU6 142 aa14.23□□□□□ -0.13
LSM4-203ENST00000593829 A6NDN8 102 aa14.22□□□□□ -0.13
LSM4-203ENST00000593829 A0A0J9YWU9 116 aa14.21□□□□□ -0.13
LSM4-203ENST00000593829 C9orf118A6NHY6 69 aa14.21□□□□□ -0.13
LSM4-203ENST00000593829 CT45A10P0DMU9 189 aa14.21□□□□□ -0.13
LSM4-203ENST00000593829 HSD52Q0P140 79 aa14.21□□□□□ -0.13
LSM4-203ENST00000593829 ERASQ7Z444 233 aa14.21□□□□□ -0.13
LSM4-203ENST00000593829 H0Y8G0 127 aa14.21□□□□□ -0.14
LSM4-203ENST00000593829 IFI27P40305 119 aaPredicted RBP14.21□□□□□ -0.14
LSM4-203ENST00000593829 SPINK13Q1W4C9 94 aa14.21□□□□□ -0.14
LSM4-203ENST00000593829 GTF2H5Q6ZYL4 71 aa14.21□□□□□ -0.14
LSM4-203ENST00000593829 ORMDL3Q8N138 153 aa14.21□□□□□ -0.14
LSM4-203ENST00000593829 PRELID3AQ96N28 172 aa14.2□□□□□ -0.14
LSM4-203ENST00000593829 VPS25Q9BRG1 176 aa14.2□□□□□ -0.14
LSM4-203ENST00000593829 HBDP02042 147 aa14.19□□□□□ -0.14
LSM4-203ENST00000593829 MUC7Q8TAX7 377 aa14.19□□□□□ -0.14
LSM4-203ENST00000593829 X6R8D5 127 aa14.19□□□□□ -0.14
LSM4-203ENST00000593829 TMEM189A5PLL7 270 aa14.19□□□□□ -0.14
LSM4-203ENST00000593829 GAGE10A6NGK3 116 aa14.19□□□□□ -0.14
LSM4-203ENST00000593829 D6R8Y8 96 aa14.19□□□□□ -0.14
LSM4-203ENST00000593829 MIFP14174 115 aa14.19□□□□□ -0.14
LSM4-203ENST00000593829 LINC01546A6NGU7 62 aa14.17□□□□□ -0.14
LSM4-203ENST00000593829 LYZL1Q6UWQ5 148 aa14.17□□□□□ -0.14
LSM4-203ENST00000593829 C11orf68Q9H3H3 251 aaKnown RBP14.17□□□□□ -0.14
LSM4-203ENST00000593829 IGHV3OR16-12A0A075B7B8 117 aa14.17□□□□□ -0.14
LSM4-203ENST00000593829 INSP01308 110 aa14.17□□□□□ -0.14
LSM4-203ENST00000593829 Q8NAQ8 132 aa14.17□□□□□ -0.14
LSM4-203ENST00000593829 MRPL51Q4U2R6 128 aaKnown RBP14.16□□□□□ -0.14
LSM4-203ENST00000593829 C1orf158Q8N1D5 194 aa14.16□□□□□ -0.14
LSM4-203ENST00000593829 IL17DQ8TAD2 202 aa14.16□□□□□ -0.14
LSM4-203ENST00000593829 LINC00477Q96M19 166 aa14.16□□□□□ -0.14
LSM4-203ENST00000593829 ODF3Q96PU9 254 aa14.16□□□□□ -0.14
LSM4-203ENST00000593829 TRAV12-2A0A075B6T6 113 aa14.15□□□□□ -0.14
LSM4-203ENST00000593829 IGHV4-28A0A0C4DH34 117 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms