RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 FAM74A7A6NL05 159 aa15.74■□□□□ 0.11
LSM4-202ENST00000593564 GIPP09681 153 aaPredicted RBP15.74■□□□□ 0.11
LSM4-202ENST00000593564 SEC11BP0C7V7 166 aa15.74■□□□□ 0.11
LSM4-202ENST00000593564 NIT1Q86X76 327 aa15.74■□□□□ 0.11
LSM4-202ENST00000593564 ZC2HC1AQ96GY0 325 aa15.74■□□□□ 0.11
LSM4-202ENST00000593564 M0R036 132 aa15.73■□□□□ 0.11
LSM4-202ENST00000593564 PTTG1O95997 202 aa15.73■□□□□ 0.11
LSM4-202ENST00000593564 FAM74A4Q5TZK3 123 aa15.73■□□□□ 0.11
LSM4-202ENST00000593564 ZFP30Q9Y2G7 519 aa15.73■□□□□ 0.11
LSM4-202ENST00000593564 SH2D1AO60880 128 aa15.72■□□□□ 0.11
LSM4-202ENST00000593564 FAM162BQ5T6X4 162 aa15.72■□□□□ 0.11
LSM4-202ENST00000593564 Q8N976 141 aa15.72■□□□□ 0.11
LSM4-202ENST00000593564 SFRP2Q96HF1 295 aa15.72■□□□□ 0.11
LSM4-202ENST00000593564 GRIFINA4D1Z8 144 aa15.71■□□□□ 0.11
LSM4-202ENST00000593564 CHCHD7Q9BUK0 85 aa15.71■□□□□ 0.11
LSM4-202ENST00000593564 PHLDA3Q9Y5J5 127 aa15.71■□□□□ 0.11
LSM4-202ENST00000593564 IGKV2D-24A0A075B6R9 120 aa15.7■□□□□ 0.1
LSM4-202ENST00000593564 A0A087WWL8 130 aa15.7■□□□□ 0.1
LSM4-202ENST00000593564 LINC01620Q4KN68 170 aa15.7■□□□□ 0.1
LSM4-202ENST00000593564 FMC1Q96HJ9 113 aa15.7■□□□□ 0.1
LSM4-202ENST00000593564 DNAJC30Q96LL9 226 aa15.7■□□□□ 0.1
LSM4-202ENST00000593564 KLK12Q9UKR0 248 aa15.7■□□□□ 0.1
LSM4-202ENST00000593564 FXYD6-FXYD2A0A087WZ82 144 aa15.69■□□□□ 0.1
LSM4-202ENST00000593564 TRBV10-1A0A0K0K1A3 114 aa15.69■□□□□ 0.1
LSM4-202ENST00000593564 RBFOX3A6NFN3 312 aa15.69■□□□□ 0.1
LSM4-202ENST00000593564 KRTAP29-1A8MX34 341 aaPredicted RBP15.69■□□□□ 0.1
LSM4-202ENST00000593564 LINC01559Q495D7 138 aa15.69■□□□□ 0.1
LSM4-202ENST00000593564 AKR1C8PQ5T2L2 129 aa15.69■□□□□ 0.1
LSM4-202ENST00000593564 SCXQ7RTU7 201 aa15.69■□□□□ 0.1
LSM4-202ENST00000593564 DEFB104AQ8WTQ1 72 aa15.69■□□□□ 0.1
LSM4-202ENST00000593564 A0A087WX48 190 aa15.68■□□□□ 0.1
LSM4-202ENST00000593564 M0R381 172 aa15.68■□□□□ 0.1
LSM4-202ENST00000593564 TPT1P13693 172 aaKnown RBP15.68■□□□□ 0.1
LSM4-202ENST00000593564 ELOBQ15370 118 aa15.68■□□□□ 0.1
LSM4-202ENST00000593564 ZNF674Q2M3X9 581 aa15.68■□□□□ 0.1
LSM4-202ENST00000593564 TRBV6-1A0A0K0K1D8 114 aa15.67■□□□□ 0.1
LSM4-202ENST00000593564 UBE2G1P62253 170 aa15.67■□□□□ 0.1
LSM4-202ENST00000593564 ATRAIDQ6UW56 229 aa15.67■□□□□ 0.1
LSM4-202ENST00000593564 ZFP82Q8N141 532 aa15.67■□□□□ 0.1
LSM4-202ENST00000593564 UBE2WQ96B02 151 aa15.67■□□□□ 0.1
LSM4-202ENST00000593564 TCEAL7Q9BRU2 100 aa15.67■□□□□ 0.1
LSM4-202ENST00000593564 MAP1LC3B2A6NCE7 125 aa15.66■□□□□ 0.1
LSM4-202ENST00000593564 LTAP01374 205 aa15.66■□□□□ 0.1
LSM4-202ENST00000593564 RPL36AP83881 106 aaKnown RBP15.66■□□□□ 0.1
LSM4-202ENST00000593564 RPL36ALQ969Q0 106 aaKnown RBP15.66■□□□□ 0.1
LSM4-202ENST00000593564 MAP1LC3BQ9GZQ8 125 aa15.66■□□□□ 0.1
LSM4-202ENST00000593564 LRP1Q07954 4544 aaKnown RBP15.66■□□□□ 0.1
LSM4-202ENST00000593564 TMSB15BA0A087X1C1 80 aa15.65■□□□□ 0.1
LSM4-202ENST00000593564 UBE2D3P61077 147 aa15.65■□□□□ 0.1
LSM4-202ENST00000593564 UBE2D2P62837 147 aa15.65■□□□□ 0.1
LSM4-202ENST00000593564 KCNIP4Q6PIL6 250 aa15.65■□□□□ 0.1
LSM4-202ENST00000593564 CHAC1Q9BUX1 264 aa15.65■□□□□ 0.1
LSM4-202ENST00000593564 TRBV7-3A0A075B6L6 115 aa15.64■□□□□ 0.09
LSM4-202ENST00000593564 FHITP49789 147 aa15.64■□□□□ 0.09
LSM4-202ENST00000593564 Q0VG73 95 aa15.64■□□□□ 0.09
LSM4-202ENST00000593564 OR10G8Q8NGN5 311 aa15.63■□□□□ 0.09
LSM4-202ENST00000593564 HMCN2Q8NDA2 5059 aa15.63■□□□□ 0.09
LSM4-202ENST00000593564 CST9LP1Q5W188 147 aa15.61■□□□□ 0.09
LSM4-202ENST00000593564 FAT3Q8TDW7 4589 aa15.61■□□□□ 0.09
LSM4-202ENST00000593564 G3V3Q6 166 aa15.6■□□□□ 0.09
LSM4-202ENST00000593564 AKR1C3P42330 323 aa15.6■□□□□ 0.09
LSM4-202ENST00000593564 KRTAP10-4P60372 401 aaPredicted RBP15.6■□□□□ 0.09
LSM4-202ENST00000593564 STOML3Q8TAV4 291 aa15.6■□□□□ 0.09
LSM4-202ENST00000593564 CIRBP-AS1Q8TBR5 109 aa15.6■□□□□ 0.09
LSM4-202ENST00000593564 CYTL1Q9NRR1 136 aa15.6■□□□□ 0.09
LSM4-202ENST00000593564 TRBV6-8A0A0A6YYG3 113 aa15.59■□□□□ 0.09
LSM4-202ENST00000593564 TMEM262E9PQX1 116 aa15.59■□□□□ 0.09
LSM4-202ENST00000593564 RAB4BP61018 213 aa15.59■□□□□ 0.09
LSM4-202ENST00000593564 C14orf177Q52M58 125 aa15.59■□□□□ 0.09
LSM4-202ENST00000593564 C1orf43Q9BWL3 253 aa15.59■□□□□ 0.09
LSM4-202ENST00000593564 BATF3Q9NR55 127 aa15.59■□□□□ 0.09
LSM4-202ENST00000593564 CXCL1P09341 107 aa15.57■□□□□ 0.08
LSM4-202ENST00000593564 PRR27Q6MZM9 219 aa15.57■□□□□ 0.08
LSM4-202ENST00000593564 ENHOQ6UWT2 76 aa15.57■□□□□ 0.08
LSM4-202ENST00000593564 CRPP02741 224 aa15.56■□□□□ 0.08
LSM4-202ENST00000593564 NEXN-AS1Q8NBZ9 246 aa15.56■□□□□ 0.08
LSM4-202ENST00000593564 ARPC5O15511 151 aa15.55■□□□□ 0.08
LSM4-202ENST00000593564 PAGE4O60829 102 aa15.55■□□□□ 0.08
LSM4-202ENST00000593564 IGLV2-8P01709 118 aa15.55■□□□□ 0.08
LSM4-202ENST00000593564 S100A9P06702 114 aaKnown RBP15.55■□□□□ 0.08
LSM4-202ENST00000593564 ZNF56Q15929 161 aa15.55■□□□□ 0.08
LSM4-202ENST00000593564 MPV17L2Q567V2 206 aa15.55■□□□□ 0.08
LSM4-202ENST00000593564 C15orf54Q8N8G6 183 aa15.55■□□□□ 0.08
LSM4-202ENST00000593564 OR10AG1Q8NH19 301 aa15.55■□□□□ 0.08
LSM4-202ENST00000593564 RPL19P84098 196 aaKnown RBP15.54■□□□□ 0.08
LSM4-202ENST00000593564 ZNF471Q9BX82 626 aaPredicted RBP15.54■□□□□ 0.08
LSM4-202ENST00000593564 SNAI2O43623 268 aa15.53■□□□□ 0.08
LSM4-202ENST00000593564 PKIAP61925 76 aa15.53■□□□□ 0.08
LSM4-202ENST00000593564 MLST8Q9BVC4 326 aa15.53■□□□□ 0.08
LSM4-202ENST00000593564 SSBP4Q9BWG4 385 aaPredicted RBP15.53■□□□□ 0.08
LSM4-202ENST00000593564 ANGP03950 147 aaKnown RBP15.52■□□□□ 0.08
LSM4-202ENST00000593564 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.52■□□□□ 0.08
LSM4-202ENST00000593564 OXTP01178 125 aa15.51■□□□□ 0.07
LSM4-202ENST00000593564 CHCHD5Q9BSY4 110 aa15.51■□□□□ 0.07
LSM4-202ENST00000593564 SCO2A0A1W2PP80 73 aa15.5■□□□□ 0.07
LSM4-202ENST00000593564 USP17L23D6RBM5 183 aa15.5■□□□□ 0.07
LSM4-202ENST00000593564 OR5AL1P0C617 328 aa15.5■□□□□ 0.07
LSM4-202ENST00000593564 MIAQ16674 131 aa15.5■□□□□ 0.07
LSM4-202ENST00000593564 BAGE2Q86Y30 109 aa15.5■□□□□ 0.07
LSM4-202ENST00000593564 MBD3L1Q8WWY6 194 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms