RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 NKX6-2Q9C056 277 aaPredicted RBP13.53□□□□□ -0.24
TRIM47-207ENST00000593089 BATF3Q9NR55 127 aa13.53□□□□□ -0.24
TRIM47-207ENST00000593089 DNLZQ5SXM8 178 aa13.52□□□□□ -0.25
TRIM47-207ENST00000593089 URGCP-MRPS24S4R325 110 aa13.52□□□□□ -0.25
TRIM47-207ENST00000593089 A0A087WWL8 130 aa13.51□□□□□ -0.25
TRIM47-207ENST00000593089 TMSB15BA0A087X1C1 80 aa13.51□□□□□ -0.25
TRIM47-207ENST00000593089 UBE2G1P62253 170 aa13.51□□□□□ -0.25
TRIM47-207ENST00000593089 FAM162BQ5T6X4 162 aa13.51□□□□□ -0.25
TRIM47-207ENST00000593089 ZFP30Q9Y2G7 519 aa13.51□□□□□ -0.25
TRIM47-207ENST00000593089 PHLDA3Q9Y5J5 127 aa13.51□□□□□ -0.25
TRIM47-207ENST00000593089 M0R381 172 aa13.5□□□□□ -0.25
TRIM47-207ENST00000593089 TPT1P13693 172 aaKnown RBP13.5□□□□□ -0.25
TRIM47-207ENST00000593089 Q6ZSA8 131 aa13.5□□□□□ -0.25
TRIM47-207ENST00000593089 NIT1Q86X76 327 aa13.5□□□□□ -0.25
TRIM47-207ENST00000593089 SFRP2Q96HF1 295 aa13.5□□□□□ -0.25
TRIM47-207ENST00000593089 FMC1Q96HJ9 113 aa13.5□□□□□ -0.25
TRIM47-207ENST00000593089 DNAJC30Q96LL9 226 aa13.5□□□□□ -0.25
TRIM47-207ENST00000593089 MAP1LC3B2A6NCE7 125 aa13.49□□□□□ -0.25
TRIM47-207ENST00000593089 LINC01620Q4KN68 170 aa13.49□□□□□ -0.25
TRIM47-207ENST00000593089 COX8CQ7Z4L0 72 aa13.49□□□□□ -0.25
TRIM47-207ENST00000593089 RMI2Q96E14 147 aa13.49□□□□□ -0.25
TRIM47-207ENST00000593089 MAP1LC3BQ9GZQ8 125 aa13.49□□□□□ -0.25
TRIM47-207ENST00000593089 COX11Q9Y6N1 276 aa13.49□□□□□ -0.25
TRIM47-207ENST00000593089 IGKV2D-24A0A075B6R9 120 aa13.48□□□□□ -0.25
TRIM47-207ENST00000593089 LINC00528Q8N1L1 170 aa13.48□□□□□ -0.25
TRIM47-207ENST00000593089 KLK12Q9UKR0 248 aa13.48□□□□□ -0.25
TRIM47-207ENST00000593089 J3QL48 77 aa13.47□□□□□ -0.25
TRIM47-207ENST00000593089 PLA2G1BP04054 148 aaKnown RBP13.47□□□□□ -0.25
TRIM47-207ENST00000593089 ZNF674Q2M3X9 581 aa13.47□□□□□ -0.25
TRIM47-207ENST00000593089 LINC01559Q495D7 138 aa13.47□□□□□ -0.25
TRIM47-207ENST00000593089 CST9LP1Q5W188 147 aa13.47□□□□□ -0.25
TRIM47-207ENST00000593089 SEC11BP0C7V7 166 aa13.46□□□□□ -0.25
TRIM47-207ENST00000593089 ZFP82Q8N141 532 aa13.46□□□□□ -0.25
TRIM47-207ENST00000593089 UBE2WQ96B02 151 aa13.46□□□□□ -0.25
TRIM47-207ENST00000593089 A0A087WX48 190 aa13.45□□□□□ -0.26
TRIM47-207ENST00000593089 RBFOX3A6NFN3 312 aa13.45□□□□□ -0.26
TRIM47-207ENST00000593089 ARPC5O15511 151 aa13.45□□□□□ -0.26
TRIM47-207ENST00000593089 LTAP01374 205 aa13.45□□□□□ -0.26
TRIM47-207ENST00000593089 Q8N976 141 aa13.45□□□□□ -0.26
TRIM47-207ENST00000593089 CYTL1Q9NRR1 136 aa13.45□□□□□ -0.26
TRIM47-207ENST00000593089 TRBV6-1A0A0K0K1D8 114 aa13.44□□□□□ -0.26
TRIM47-207ENST00000593089 G3V3Q6 166 aa13.44□□□□□ -0.26
TRIM47-207ENST00000593089 AKR1C3P42330 323 aa13.44□□□□□ -0.26
TRIM47-207ENST00000593089 RPL36AP83881 106 aaKnown RBP13.44□□□□□ -0.26
TRIM47-207ENST00000593089 KCNIP4Q6PIL6 250 aa13.44□□□□□ -0.26
TRIM47-207ENST00000593089 STOML3Q8TAV4 291 aa13.44□□□□□ -0.26
TRIM47-207ENST00000593089 RPL36ALQ969Q0 106 aaKnown RBP13.44□□□□□ -0.26
TRIM47-207ENST00000593089 TRBV10-1A0A0K0K1A3 114 aa13.43□□□□□ -0.26
TRIM47-207ENST00000593089 FHITP49789 147 aa13.43□□□□□ -0.26
TRIM47-207ENST00000593089 SCXQ7RTU7 201 aa13.43□□□□□ -0.26
TRIM47-207ENST00000593089 TCEAL7Q9BRU2 100 aa13.43□□□□□ -0.26
TRIM47-207ENST00000593089 UBE2D3P61077 147 aa13.42□□□□□ -0.26
TRIM47-207ENST00000593089 UBE2D2P62837 147 aa13.42□□□□□ -0.26
TRIM47-207ENST00000593089 ELOBQ15370 118 aa13.42□□□□□ -0.26
TRIM47-207ENST00000593089 CHCHD7Q9BUK0 85 aa13.42□□□□□ -0.26
TRIM47-207ENST00000593089 TRBV7-3A0A075B6L6 115 aa13.41□□□□□ -0.26
TRIM47-207ENST00000593089 PAGE4O60829 102 aa13.41□□□□□ -0.26
TRIM47-207ENST00000593089 TMEM262E9PQX1 116 aa13.4□□□□□ -0.26
TRIM47-207ENST00000593089 RPL19P84098 196 aaKnown RBP13.4□□□□□ -0.26
TRIM47-207ENST00000593089 A0A1B0GV50 99 aa13.39□□□□□ -0.27
TRIM47-207ENST00000593089 ZNF56Q15929 161 aa13.39□□□□□ -0.27
TRIM47-207ENST00000593089 OR10AG1Q8NH19 301 aa13.39□□□□□ -0.27
TRIM47-207ENST00000593089 TRBV6-8A0A0A6YYG3 113 aa13.38□□□□□ -0.27
TRIM47-207ENST00000593089 SMLR1H3BR10 107 aa13.38□□□□□ -0.27
TRIM47-207ENST00000593089 RAB4BP61018 213 aa13.38□□□□□ -0.27
TRIM47-207ENST00000593089 Q0VG73 95 aa13.38□□□□□ -0.27
TRIM47-207ENST00000593089 ATRAIDQ6UW56 229 aa13.38□□□□□ -0.27
TRIM47-207ENST00000593089 OR10G8Q8NGN5 311 aa13.38□□□□□ -0.27
TRIM47-207ENST00000593089 DEFB104AQ8WTQ1 72 aa13.38□□□□□ -0.27
TRIM47-207ENST00000593089 NEXN-AS1Q8NBZ9 246 aa13.37□□□□□ -0.27
TRIM47-207ENST00000593089 SFT2D1Q8WV19 159 aa13.37□□□□□ -0.27
TRIM47-207ENST00000593089 CHAC1Q9BUX1 264 aa13.37□□□□□ -0.27
TRIM47-207ENST00000593089 C1orf43Q9BWL3 253 aa13.37□□□□□ -0.27
TRIM47-207ENST00000593089 MUC21A0A0G2JKD1 596 aa13.36□□□□□ -0.27
TRIM47-207ENST00000593089 MUC21A0A140T8X8 626 aa13.36□□□□□ -0.27
TRIM47-207ENST00000593089 SCO2A0A1W2PP80 73 aa13.36□□□□□ -0.27
TRIM47-207ENST00000593089 CRPP02741 224 aa13.36□□□□□ -0.27
TRIM47-207ENST00000593089 ENHOQ6UWT2 76 aa13.36□□□□□ -0.27
TRIM47-207ENST00000593089 C15orf54Q8N8G6 183 aa13.36□□□□□ -0.27
TRIM47-207ENST00000593089 FAM213BQ8TBF2 198 aa13.36□□□□□ -0.27
TRIM47-207ENST00000593089 ZNF471Q9BX82 626 aaPredicted RBP13.36□□□□□ -0.27
TRIM47-207ENST00000593089 KRTAP29-1A8MX34 341 aaPredicted RBP13.35□□□□□ -0.27
TRIM47-207ENST00000593089 S100A9P06702 114 aaKnown RBP13.35□□□□□ -0.27
TRIM47-207ENST00000593089 MPV17L2Q567V2 206 aa13.35□□□□□ -0.27
TRIM47-207ENST00000593089 CIRBP-AS1Q8TBR5 109 aa13.35□□□□□ -0.27
TRIM47-207ENST00000593089 PFDN1O60925 122 aa13.34□□□□□ -0.27
TRIM47-207ENST00000593089 ANGP03950 147 aaKnown RBP13.34□□□□□ -0.27
TRIM47-207ENST00000593089 SSTP61278 116 aa13.34□□□□□ -0.27
TRIM47-207ENST00000593089 SPANXN1Q5VSR9 72 aa13.34□□□□□ -0.27
TRIM47-207ENST00000593089 PRR27Q6MZM9 219 aa13.34□□□□□ -0.27
TRIM47-207ENST00000593089 BAGE2Q86Y30 109 aa13.34□□□□□ -0.27
TRIM47-207ENST00000593089 MBD3L1Q8WWY6 194 aa13.34□□□□□ -0.27
TRIM47-207ENST00000593089 F5H697 171 aa13.33□□□□□ -0.28
TRIM47-207ENST00000593089 CXCL1P09341 107 aa13.33□□□□□ -0.28
TRIM47-207ENST00000593089 RGS21Q2M5E4 152 aa13.33□□□□□ -0.28
TRIM47-207ENST00000593089 C14orf177Q52M58 125 aa13.33□□□□□ -0.28
TRIM47-207ENST00000593089 KCNRGQ8N5I3 272 aa13.33□□□□□ -0.28
TRIM47-207ENST00000593089 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.33□□□□□ -0.28
TRIM47-207ENST00000593089 CHCHD5Q9BSY4 110 aa13.33□□□□□ -0.28
TRIM47-207ENST00000593089 MLST8Q9BVC4 326 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms