RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 AMTNQ6UX39 209 aa12.28□□□□□ -0.44
PRKCSH-217ENST00000592741 TRGV11A0A075B6L2 103 aa12.28□□□□□ -0.44
PRKCSH-217ENST00000592741 TRAV8-6A0A0B4J262 113 aa12.28□□□□□ -0.44
PRKCSH-217ENST00000592741 KRTAP1-3Q8IUG1 177 aa12.28□□□□□ -0.44
PRKCSH-217ENST00000592741 KIR2DL4Q99706 377 aa12.28□□□□□ -0.44
PRKCSH-217ENST00000592741 PEMTQ9UBM1 199 aa12.28□□□□□ -0.44
PRKCSH-217ENST00000592741 C9orf118A6NHY6 69 aa12.27□□□□□ -0.45
PRKCSH-217ENST00000592741 C4orf3Q8WVX3 66 aa12.27□□□□□ -0.45
PRKCSH-217ENST00000592741 TRBV6-5A0A0K0K1A5 114 aa12.26□□□□□ -0.45
PRKCSH-217ENST00000592741 ZNF56Q15929 161 aa12.26□□□□□ -0.45
PRKCSH-217ENST00000592741 ZFP2Q6ZN57 461 aa12.26□□□□□ -0.45
PRKCSH-217ENST00000592741 OR11H1Q8NG94 326 aa12.26□□□□□ -0.45
PRKCSH-217ENST00000592741 USP9YO00507 2555 aaPredicted RBP12.26□□□□□ -0.45
PRKCSH-217ENST00000592741 TRAV2A0A0B4J234 112 aa12.26□□□□□ -0.45
PRKCSH-217ENST00000592741 SDHAF1A6NFY7 115 aa12.26□□□□□ -0.45
PRKCSH-217ENST00000592741 FOSL1P15407 271 aa12.26□□□□□ -0.45
PRKCSH-217ENST00000592741 GCSHP23434 173 aa12.26□□□□□ -0.45
PRKCSH-217ENST00000592741 KHDC1LQ5JSQ8 128 aa12.26□□□□□ -0.45
PRKCSH-217ENST00000592741 TP53TG1Q9Y2A0 90 aa12.26□□□□□ -0.45
PRKCSH-217ENST00000592741 PRSS29PA6NIE9 313 aa12.25□□□□□ -0.45
PRKCSH-217ENST00000592741 KNCNA6PVL3 124 aa12.25□□□□□ -0.45
PRKCSH-217ENST00000592741 DEFB131AP59861 70 aa12.25□□□□□ -0.45
PRKCSH-217ENST00000592741 TMEM86BQ8N661 226 aa12.25□□□□□ -0.45
PRKCSH-217ENST00000592741 TEX29Q8N6K0 151 aa12.25□□□□□ -0.45
PRKCSH-217ENST00000592741 POLQO75417 2590 aa12.25□□□□□ -0.45
PRKCSH-217ENST00000592741 ZFYVE26Q68DK2 2539 aa12.25□□□□□ -0.45
PRKCSH-217ENST00000592741 MAPKAPK5-AS1Q8N8E1 139 aa12.25□□□□□ -0.45
PRKCSH-217ENST00000592741 TRBV27A0A0K0K1C4 114 aa12.24□□□□□ -0.45
PRKCSH-217ENST00000592741 OR11H12B2RN74 326 aa12.24□□□□□ -0.45
PRKCSH-217ENST00000592741 CRYGDP07320 174 aa12.24□□□□□ -0.45
PRKCSH-217ENST00000592741 OR11H2Q8NH07 326 aa12.24□□□□□ -0.45
PRKCSH-217ENST00000592741 TRPT1Q86TN4 253 aaKnown RBP12.23□□□□□ -0.45
PRKCSH-217ENST00000592741 TMEM141Q96I45 108 aa12.23□□□□□ -0.45
PRKCSH-217ENST00000592741 DOPEY2Q9Y3R5 2298 aa12.23□□□□□ -0.45
PRKCSH-217ENST00000592741 ZANQ9Y493 2812 aa12.23□□□□□ -0.45
PRKCSH-217ENST00000592741 H3BUT2 72 aa12.23□□□□□ -0.45
PRKCSH-217ENST00000592741 K7EP13 123 aa12.23□□□□□ -0.45
PRKCSH-217ENST00000592741 M0QY20 66 aa12.23□□□□□ -0.45
PRKCSH-217ENST00000592741 RIPPLY3P57055 190 aa12.23□□□□□ -0.45
PRKCSH-217ENST00000592741 ZNF876PQ49A33 203 aa12.23□□□□□ -0.45
PRKCSH-217ENST00000592741 DYNLRB2Q8TF09 96 aa12.23□□□□□ -0.45
PRKCSH-217ENST00000592741 LRRK2Q5S007 2527 aa12.23□□□□□ -0.45
PRKCSH-217ENST00000592741 A8MTW9 85 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 SMIM13P0DJ93 91 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 FXYD2P54710 66 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 CEND1Q8N111 149 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 KLHL30-AS1Q8NEE0 82 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 RAB37Q96AX2 223 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 DUX3Q96PT4 197 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 AGRNO00468 2067 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 IGIPA6NJ69 53 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 H3BMM0 161 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 TAL2Q16559 108 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 TMEM61Q8N0U2 210 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 JMJD8Q96S16 334 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 TIMM17AQ99595 171 aa12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 ZNF256Q9Y2P7 627 aaPredicted RBP12.22□□□□□ -0.45
PRKCSH-217ENST00000592741 GAGE10A6NGK3 116 aa12.21□□□□□ -0.45
PRKCSH-217ENST00000592741 RBMY1A1P0DJD3 496 aaKnown RBP12.21□□□□□ -0.45
PRKCSH-217ENST00000592741 RBMY1CP0DJD4 496 aa12.21□□□□□ -0.45
PRKCSH-217ENST00000592741 RBMY1FQ15415 496 aaKnown RBP12.21□□□□□ -0.45
PRKCSH-217ENST00000592741 MORN3Q6PF18 240 aaPredicted RBP12.21□□□□□ -0.45
PRKCSH-217ENST00000592741 GTF2H5Q6ZYL4 71 aa12.21□□□□□ -0.45
PRKCSH-217ENST00000592741 TM2D2Q9BX73 214 aa12.21□□□□□ -0.45
PRKCSH-217ENST00000592741 MYMXA0A1B0GTQ4 84 aa12.2□□□□□ -0.46
PRKCSH-217ENST00000592741 E9PLD3 99 aa12.2□□□□□ -0.46
PRKCSH-217ENST00000592741 TSHBP01222 138 aa12.2□□□□□ -0.46
PRKCSH-217ENST00000592741 PMVKQ15126 192 aa12.2□□□□□ -0.46
PRKCSH-217ENST00000592741 PAPPA-AS1Q5QFB9 102 aa12.2□□□□□ -0.46
PRKCSH-217ENST00000592741 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
PRKCSH-217ENST00000592741 DLX4Q92988 240 aaPredicted RBP12.2□□□□□ -0.46
PRKCSH-217ENST00000592741 RPL39P62891 51 aaKnown RBP12.2□□□□□ -0.46
PRKCSH-217ENST00000592741 RHOHQ15669 191 aa12.2□□□□□ -0.46
PRKCSH-217ENST00000592741 Q6ZSV7 163 aa12.19□□□□□ -0.46
PRKCSH-217ENST00000592741 PTPN13Q12923 2485 aa12.19□□□□□ -0.46
PRKCSH-217ENST00000592741 RBMY1BA6NDE4 496 aaKnown RBP12.19□□□□□ -0.46
PRKCSH-217ENST00000592741 RBMY1EA6NEQ0 496 aaKnown RBP12.19□□□□□ -0.46
PRKCSH-217ENST00000592741 RBMY1DP0C7P1 496 aaKnown RBP12.19□□□□□ -0.46
PRKCSH-217ENST00000592741 NSUN5P1Q3KNT7 163 aa12.19□□□□□ -0.46
PRKCSH-217ENST00000592741 WFDC11Q8NEX6 87 aa12.19□□□□□ -0.46
PRKCSH-217ENST00000592741 NAA38Q9BRA0 125 aaKnown RBP12.19□□□□□ -0.46
PRKCSH-217ENST00000592741 PRADC1Q9BSG0 188 aa12.19□□□□□ -0.46
PRKCSH-217ENST00000592741 MAP6D1Q9H9H5 199 aa12.19□□□□□ -0.46
PRKCSH-217ENST00000592741 NAV2Q8IVL1 2488 aa12.18□□□□□ -0.46
PRKCSH-217ENST00000592741 HTN1P15515 57 aa12.18□□□□□ -0.46
PRKCSH-217ENST00000592741 IGLV4-69A0A075B6H9 119 aa12.17□□□□□ -0.46
PRKCSH-217ENST00000592741 A0A1W2PPM0 123 aa12.17□□□□□ -0.46
PRKCSH-217ENST00000592741 DNAJC9-AS1A6NH13 148 aa12.17□□□□□ -0.46
PRKCSH-217ENST00000592741 K7EP34 96 aa12.17□□□□□ -0.46
PRKCSH-217ENST00000592741 HERVK_113P61574 105 aa12.17□□□□□ -0.46
PRKCSH-217ENST00000592741 HIST1H4GQ99525 98 aa12.17□□□□□ -0.46
PRKCSH-217ENST00000592741 CST9LQ9H4G1 147 aa12.17□□□□□ -0.46
PRKCSH-217ENST00000592741 DEFB114Q30KQ6 69 aa12.17□□□□□ -0.46
PRKCSH-217ENST00000592741 UFSP1Q6NVU6 142 aa12.17□□□□□ -0.46
PRKCSH-217ENST00000592741 RNASE8Q8TDE3 154 aaKnown RBP12.17□□□□□ -0.46
PRKCSH-217ENST00000592741 NHP2Q9NX24 153 aaKnown RBP12.17□□□□□ -0.46
PRKCSH-217ENST00000592741 MXRA5Q9NR99 2828 aa12.16□□□□□ -0.46
PRKCSH-217ENST00000592741 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
PRKCSH-217ENST00000592741 I3L3M4 83 aa12.16□□□□□ -0.46
PRKCSH-217ENST00000592741 ZNF415Q09FC8 603 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms