RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 NDUFA3O95167 84 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 IGKV2D-40P01614 121 aaPredicted RBP2.58□□□□□ -2
LINC01539-203ENST00000589447 IGLV1-47P01700 117 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 IGHG4P01861 327 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 LGALS1P09382 135 aaKnown RBP2.58□□□□□ -2
LINC01539-203ENST00000589447 APELAP0DMC3 54 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 GATA1P15976 413 aaPredicted RBP2.58□□□□□ -2
LINC01539-203ENST00000589447 CNTFRP26992 372 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 PSMB2P49721 201 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 UBE2D1P51668 147 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 UBE2D3P61077 147 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 UBE2D2P62837 147 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 CCL8P80075 99 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 ATP5G2Q06055 141 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 ZNF415Q09FC8 603 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 GAGE5Q13069 117 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 GAGE6Q13070 117 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 SRSF9Q13242 221 aaKnown RBP eCLIP2.58□□□□□ -2
LINC01539-203ENST00000589447 SPANXN1Q5VSR9 72 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 RUSC1-AS1Q66K80 236 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 MORN3Q6PF18 240 aaPredicted RBP2.58□□□□□ -2
LINC01539-203ENST00000589447 AMTNQ6UX39 209 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 GFRALQ6UXV0 394 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 Q71RC1 249 aaPredicted RBP2.58□□□□□ -2
LINC01539-203ENST00000589447 ARL17AQ8IVW1 177 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 MAPKAPK5-AS1Q8N8E1 139 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 C17orf77Q96MU5 243 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 SCGB3A1Q96QR1 104 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 C20orf78Q9BR46 151 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 SMIM2Q9BVW6 85 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 TTTY13Q9BZ97 58 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 DYNLRB1Q9NP97 96 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 C21orf62Q9NYP8 219 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 CTSZQ9UBR2 303 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 UFC1Q9Y3C8 167 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.58□□□□□ -2
LINC01539-203ENST00000589447 NSD1Q96L73 2696 aaPredicted RBP2.58□□□□□ -2
LINC01539-203ENST00000589447 POLEQ07864 2286 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 ZANQ9Y493 2812 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 ACANP16112 2415 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 SPG11Q96JI7 2443 aa2.58□□□□□ -2
LINC01539-203ENST00000589447 AGRNO00468 2067 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 AKAP6Q13023 2319 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 IGLV11-55A0A075B6I3 123 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 IGHV1-69DA0A0B4J2H0 117 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 C16orf97H3BN30 126 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 H3BVH4 76 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 K7ENP7 123 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 TNFRSF13BO14836 293 aaPredicted RBP2.57□□□□□ -2
LINC01539-203ENST00000589447 SNCGO76070 127 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 MT-ATP8P03928 68 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 SCGB1C2P0DMR2 95 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 MED14OSP0DP75 135 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 COX7A1P24310 79 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 HLA-DMBP28068 263 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 ZNF80P51504 273 aaPredicted RBP2.57□□□□□ -2
LINC01539-203ENST00000589447 SEC61BP60468 96 aaKnown RBP2.57□□□□□ -2
LINC01539-203ENST00000589447 ERCC8Q13216 396 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 CDSNQ15517 529 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 BEAN1Q3B7T3 259 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 PRR30Q53SZ7 412 aaPredicted RBP2.57□□□□□ -2
LINC01539-203ENST00000589447 Q6Q795 121 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 LYPD2Q6UXB3 125 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 SBSPONQ8IVN8 264 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 NRACQ8N912 160 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 NEXN-AS1Q8NBZ9 246 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 FDCSPQ8NFU4 85 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 NPBQ8NG41 125 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 Q8TAT8 98 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 CCL17Q92583 94 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 TOMM6Q96B49 74 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 TIMD4Q96H15 378 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 PRADC1Q9BSG0 188 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 SPANXDQ9BXN6 97 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 DPH3P1Q9H4G8 78 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 MALRD1Q5VYJ5 2156 aa2.57□□□□□ -2
LINC01539-203ENST00000589447 ZNF469Q96JG9 3925 aaPredicted RBP2.57□□□□□ -2
LINC01539-203ENST00000589447 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.56□□□□□ -2
LINC01539-203ENST00000589447 TRAV8-2A0A0B4J237 113 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 C11orf86A6NJI1 115 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 OOSP1A8MZH6 123 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 RHODO00212 210 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 TRGV3P03979 118 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 P0DMU3 169 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 FAM231AP0DMU4 169 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 FAM231CP0DMU5 169 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 LGALS3P17931 250 aaKnown RBP2.56□□□□□ -2
LINC01539-203ENST00000589447 ID1P41134 155 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 INSL3P51460 131 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 EFNA4P52798 201 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 XGP55808 180 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 HES1Q14469 280 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 ATXN8Q156A1 80 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 TTC32Q5I0X7 151 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 C2orf66Q6UXQ4 117 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 LINC00336Q6ZUF6 198 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 NFE4Q86UQ8 179 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 NDUFA11Q86Y39 141 aa2.56□□□□□ -2
LINC01539-203ENST00000589447 DYNAPQ8N1N2 210 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms