RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 C14orf177Q52M58 125 aa3.71□□□□□ -1.82
LINC01539-202ENST00000589293 CFAP126Q5VTH2 177 aa3.71□□□□□ -1.82
LINC01539-202ENST00000589293 WDR73Q6P4I2 378 aa3.71□□□□□ -1.82
LINC01539-202ENST00000589293 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.71□□□□□ -1.82
LINC01539-202ENST00000589293 WDR61Q9GZS3 305 aaKnown RBP3.71□□□□□ -1.82
LINC01539-202ENST00000589293 IGKV2D-30A0A075B6S6 120 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 A8MWV9 139 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 CRPP02741 224 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 PRSS2P07478 247 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 GAGE1Q13065 139 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 GAGE4Q13068 117 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 GAGE5Q13069 117 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 SMUG1Q53HV7 270 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 ARL6IP6Q8N6S5 226 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 OR10G9Q8NGN4 311 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 ENKURQ8TC29 256 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 BAALCQ8WXS3 180 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 C11orf1Q9H5F2 150 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 OR5AC2Q9NZP5 309 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 PAM16Q9Y3D7 125 aa3.7□□□□□ -1.82
LINC01539-202ENST00000589293 IGLV5-37A0A075B6J1 123 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 TMEM262E9PQX1 116 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 SSNA1O43805 119 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 GCGP01275 180 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 ASIPP42127 132 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 Q0VG73 95 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 ZNF506Q5JVG8 444 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 SAPCD1Q5SSQ6 148 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 ZFP2Q6ZN57 461 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 SCXQ7RTU7 201 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 DAZ4Q86SG3 579 aaKnown RBP3.69□□□□□ -1.82
LINC01539-202ENST00000589293 CYB561D1Q8N8Q1 229 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 OR2T35Q8NGX2 323 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 UBE2WQ96B02 151 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 CHAC1Q9BUX1 264 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 CCDC32Q9BV29 185 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 SMIM3Q9BZL3 60 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 DPH3P1Q9H4G8 78 aa3.69□□□□□ -1.82
LINC01539-202ENST00000589293 DAZ3Q9NR90 486 aaKnown RBP3.69□□□□□ -1.82
LINC01539-202ENST00000589293 VPS13BQ7Z7G8 4022 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 PLA2G10O15496 165 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 SIX6O95475 246 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 IFNA7P01567 189 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 IGLV2-8P01709 118 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 RPL12P30050 165 aaKnown RBP3.68□□□□□ -1.82
LINC01539-202ENST00000589293 SEC61BP60468 96 aaKnown RBP3.68□□□□□ -1.82
LINC01539-202ENST00000589293 RPL37AP61513 92 aaKnown RBP3.68□□□□□ -1.82
LINC01539-202ENST00000589293 GNG5P63218 68 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 LINC01620Q4KN68 170 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 FAM74A4Q5TZK3 123 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 Q6ZSA8 131 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 PRNTQ86SH4 94 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 C5orf17Q8NAS9 161 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 OR10G7Q8NGN6 311 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 OR2G3Q8NGZ4 309 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 PTH2Q96A98 100 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 DPH3Q96FX2 82 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 SGK494Q96LW2 274 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 SDHCQ99643 169 aaPredicted RBP3.68□□□□□ -1.82
LINC01539-202ENST00000589293 KLK12Q9UKR0 248 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 HSPB11Q9Y547 144 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 MYCBP2O75592 4640 aa3.68□□□□□ -1.82
LINC01539-202ENST00000589293 FABP5P3A8MUU1 101 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 HMGB3O15347 200 aaKnown RBP3.67□□□□□ -1.82
LINC01539-202ENST00000589293 MBP02144 154 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 TCRAP04437 139 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 ARL14EPLP0DKL9 152 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 CDC34P49427 236 aaPredicted RBP3.67□□□□□ -1.82
LINC01539-202ENST00000589293 PKIAP61925 76 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 RPL36AP83881 106 aaKnown RBP3.67□□□□□ -1.82
LINC01539-202ENST00000589293 FLI1Q01543 452 aaPredicted RBP3.67□□□□□ -1.82
LINC01539-202ENST00000589293 IL15RAQ13261 267 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 WFDC2Q14508 124 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 HSD17B11Q8NBQ5 300 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 OR11H4Q8NGC9 324 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 CIRBP-AS1Q8TBR5 109 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 PPP1R1CQ8WVI7 109 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 C9orf85Q96MD7 179 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 CHCHD7Q9BUK0 85 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 PARLQ9H300 379 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 TMEM167BQ9NRX6 74 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 PSG8Q9UQ74 426 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 PHLDA3Q9Y5J5 127 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 FAT1Q14517 4588 aa3.67□□□□□ -1.82
LINC01539-202ENST00000589293 A0A0D9SG52 128 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 A0A1B0GUV1 79 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 RNF222A6NCQ9 220 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 B4DEV8 164 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 EIF3GO75821 320 aaKnown RBP eCLIP3.66□□□□□ -1.82
LINC01539-202ENST00000589293 IGLV2-11P01706 119 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 HLA-DQA1P01909 254 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 TPT1P13693 172 aaKnown RBP3.66□□□□□ -1.82
LINC01539-202ENST00000589293 RAB2AP61019 212 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 DPPA3Q6W0C5 159 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 NIT1Q86X76 327 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 TMEM75Q8N9X5 138 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 S100ZQ8WXG8 99 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 TVP23CQ96ET8 276 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 ZC2HC1AQ96GY0 325 aa3.66□□□□□ -1.82
LINC01539-202ENST00000589293 NDUFA13Q9P0J0 144 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms