RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 Q6ZSV7 163 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 SYT8Q8NBV8 401 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 OR9G4Q8NGQ1 327 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 C9orf85Q96MD7 179 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 ZMAT5Q9UDW3 170 aaKnown RBP7.4□□□□□ -1.22
VPS25-202ENST00000589219 IGHV1OR15-1A0A075B7D0 117 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 TRAV26-2A0A0B4J265 109 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 TRAV12-3A0A0B4J271 114 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 GNRH2O43555 120 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 NDUFA7O95182 113 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 CD7P09564 240 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 COX8AP10176 69 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 HLA-DRB4P13762 266 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
VPS25-202ENST00000589219 ADAMTSL5Q6ZMM2 481 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 LINC00469Q8N7U9 141 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 KLHL30-AS1Q8NEE0 82 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 OR11H1Q8NG94 326 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 DYNLRB2Q8TF09 96 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 HLA-DRB4X5D2U9 266 aa7.39□□□□□ -1.23
VPS25-202ENST00000589219 TRAV25A0A0B4J276 109 aa7.38□□□□□ -1.23
VPS25-202ENST00000589219 IGHV3-16A0A0C4DH30 117 aa7.38□□□□□ -1.23
VPS25-202ENST00000589219 G0S2P27469 103 aa7.38□□□□□ -1.23
VPS25-202ENST00000589219 BATFQ16520 125 aa7.38□□□□□ -1.23
VPS25-202ENST00000589219 DEFB136Q30KP8 78 aa7.38□□□□□ -1.23
VPS25-202ENST00000589219 AMTNQ6UX39 209 aa7.38□□□□□ -1.23
VPS25-202ENST00000589219 C18orf65Q6ZTR6 163 aa7.38□□□□□ -1.23
VPS25-202ENST00000589219 C14orf178Q8N769 122 aaPredicted RBP7.38□□□□□ -1.23
VPS25-202ENST00000589219 RASL10AQ92737 203 aa7.38□□□□□ -1.23
VPS25-202ENST00000589219 SELENOKQ9Y6D0 94 aa7.38□□□□□ -1.23
VPS25-202ENST00000589219 NUDT3O95989 172 aa7.37□□□□□ -1.23
VPS25-202ENST00000589219 FXYD7P58549 80 aa7.37□□□□□ -1.23
VPS25-202ENST00000589219 ODF1Q14990 250 aa7.37□□□□□ -1.23
VPS25-202ENST00000589219 SPINK13Q1W4C9 94 aa7.37□□□□□ -1.23
VPS25-202ENST00000589219 SPAG8Q99932 426 aaPredicted RBP7.37□□□□□ -1.23
VPS25-202ENST00000589219 KIF25-AS1Q9Y6Z4 181 aa7.37□□□□□ -1.23
VPS25-202ENST00000589219 TRRAPQ9Y4A5 3859 aa7.36□□□□□ -1.23
VPS25-202ENST00000589219 TCAPO15273 167 aa7.36□□□□□ -1.23
VPS25-202ENST00000589219 DLEU1O43261 78 aa7.36□□□□□ -1.23
VPS25-202ENST00000589219 DPM2O94777 84 aa7.36□□□□□ -1.23
VPS25-202ENST00000589219 DEFB131AP59861 70 aa7.36□□□□□ -1.23
VPS25-202ENST00000589219 FHL3Q13643 280 aa7.36□□□□□ -1.23
VPS25-202ENST00000589219 C18orf15Q96N68 181 aa7.36□□□□□ -1.23
VPS25-202ENST00000589219 MCRIP2Q9BUT9 160 aaKnown RBP7.36□□□□□ -1.23
VPS25-202ENST00000589219 C16orf95Q9H693 158 aa7.36□□□□□ -1.23
VPS25-202ENST00000589219 ZMAT4Q9H898 229 aa7.36□□□□□ -1.23
VPS25-202ENST00000589219 TRAV12-2A0A075B6T6 113 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 TRAV12-1A0A0B4J245 112 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 TRBV6-5A0A0K0K1A5 114 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 IGKV3-20P01619 116 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 IGKCP01834 107 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 PRSS1P07477 247 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 LINC00315P59091 139 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 ANKRD39Q53RE8 183 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 SUMO4Q6EEV6 95 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 TMEM61Q8N0U2 210 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 DLX4Q92988 240 aaPredicted RBP7.35□□□□□ -1.23
VPS25-202ENST00000589219 TOMM6Q96B49 74 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 RPL39LQ96EH5 51 aaKnown RBP7.35□□□□□ -1.23
VPS25-202ENST00000589219 CLUHP3Q96NS8 147 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 CITED1Q99966 193 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 LINC00467Q9BRT7 94 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 MAP6D1Q9H9H5 199 aa7.35□□□□□ -1.23
VPS25-202ENST00000589219 A0A087WX48 190 aa7.34□□□□□ -1.23
VPS25-202ENST00000589219 H3BMM0 161 aa7.34□□□□□ -1.23
VPS25-202ENST00000589219 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.34□□□□□ -1.23
VPS25-202ENST00000589219 SIVA1O15304 175 aa7.34□□□□□ -1.23
VPS25-202ENST00000589219 FGF6P10767 208 aa7.34□□□□□ -1.23
VPS25-202ENST00000589219 PLNP26678 52 aa7.34□□□□□ -1.23
VPS25-202ENST00000589219 HINT1P49773 126 aaPredicted RBP7.34□□□□□ -1.23
VPS25-202ENST00000589219 DEFB114Q30KQ6 69 aa7.34□□□□□ -1.23
VPS25-202ENST00000589219 PIK3CD-AS1Q5SR53 167 aa7.34□□□□□ -1.23
VPS25-202ENST00000589219 Q8N1Y9 231 aa7.34□□□□□ -1.23
VPS25-202ENST00000589219 RAX2Q96IS3 184 aa7.34□□□□□ -1.23
VPS25-202ENST00000589219 EDA2RQ9HAV5 297 aa7.34□□□□□ -1.23
VPS25-202ENST00000589219 DKK2Q9UBU2 259 aa7.34□□□□□ -1.23
VPS25-202ENST00000589219 ZNF256Q9Y2P7 627 aaPredicted RBP7.34□□□□□ -1.23
VPS25-202ENST00000589219 CBY3A6NI87 242 aa7.33□□□□□ -1.24
VPS25-202ENST00000589219 KNCNA6PVL3 124 aa7.33□□□□□ -1.24
VPS25-202ENST00000589219 SPRY2O43597 315 aa7.33□□□□□ -1.24
VPS25-202ENST00000589219 ZNF415Q09FC8 603 aa7.33□□□□□ -1.24
VPS25-202ENST00000589219 GAGE1Q13065 139 aa7.33□□□□□ -1.24
VPS25-202ENST00000589219 BOD1L2Q8IYS8 172 aa7.33□□□□□ -1.24
VPS25-202ENST00000589219 STPG4Q8N801 248 aa7.33□□□□□ -1.24
VPS25-202ENST00000589219 LINC01006Q8NI28 216 aa7.33□□□□□ -1.24
VPS25-202ENST00000589219 PTH2Q96A98 100 aa7.33□□□□□ -1.24
VPS25-202ENST00000589219 CSTL1Q9H114 145 aa7.33□□□□□ -1.24
VPS25-202ENST00000589219 TSSC4Q9Y5U2 329 aaPredicted RBP7.33□□□□□ -1.24
VPS25-202ENST00000589219 VWFP04275 2813 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 H7C1H1 209 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 J3QL48 77 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 VCYO14598 125 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 INSP01308 110 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 PROK1P58294 105 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 ZNF56Q15929 161 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 BVES-AS1Q5T3Y7 98 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 C2orf66Q6UXQ4 117 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 C2orf91Q6ZV80 131 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 TRPT1Q86TN4 253 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 258.6 ms