RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 NIT1Q86X76 327 aa14.02□□□□□ -0.17
NEDD4L-225ENST00000589054 INO80EQ8NBZ0 244 aaPredicted RBP14.02□□□□□ -0.17
NEDD4L-225ENST00000589054 FAM74A4Q5TZK3 123 aa14.01□□□□□ -0.17
NEDD4L-225ENST00000589054 HIST1H2BAQ96A08 127 aa14.01□□□□□ -0.17
NEDD4L-225ENST00000589054 SFRP2Q96HF1 295 aa14.01□□□□□ -0.17
NEDD4L-225ENST00000589054 BORCS7-ASMTA0A0B4J1R7 106 aa14□□□□□ -0.17
NEDD4L-225ENST00000589054 ZNF674Q2M3X9 581 aa14□□□□□ -0.17
NEDD4L-225ENST00000589054 FHITP49789 147 aa13.99□□□□□ -0.17
NEDD4L-225ENST00000589054 OR11H4Q8NGC9 324 aa13.99□□□□□ -0.17
NEDD4L-225ENST00000589054 KLK12Q9UKR0 248 aa13.99□□□□□ -0.17
NEDD4L-225ENST00000589054 ZFP30Q9Y2G7 519 aa13.99□□□□□ -0.17
NEDD4L-225ENST00000589054 A0A087WWC5 75 aa13.98□□□□□ -0.17
NEDD4L-225ENST00000589054 MAP1LC3B2A6NCE7 125 aa13.98□□□□□ -0.17
NEDD4L-225ENST00000589054 LINC01559Q495D7 138 aa13.98□□□□□ -0.17
NEDD4L-225ENST00000589054 AKR1C8PQ5T2L2 129 aa13.98□□□□□ -0.17
NEDD4L-225ENST00000589054 LINC00528Q8N1L1 170 aa13.98□□□□□ -0.17
NEDD4L-225ENST00000589054 MAP1LC3BQ9GZQ8 125 aa13.98□□□□□ -0.17
NEDD4L-225ENST00000589054 FAT3Q8TDW7 4589 aa13.97□□□□□ -0.17
NEDD4L-225ENST00000589054 M0R381 172 aa13.97□□□□□ -0.17
NEDD4L-225ENST00000589054 LTAP01374 205 aa13.97□□□□□ -0.17
NEDD4L-225ENST00000589054 FAM162BQ5T6X4 162 aa13.97□□□□□ -0.17
NEDD4L-225ENST00000589054 SYT8Q8NBV8 401 aa13.97□□□□□ -0.17
NEDD4L-225ENST00000589054 TRBV6-1A0A0K0K1D8 114 aa13.96□□□□□ -0.17
NEDD4L-225ENST00000589054 RHODO00212 210 aa13.96□□□□□ -0.17
NEDD4L-225ENST00000589054 KRTAP10-4P60372 401 aaPredicted RBP13.96□□□□□ -0.17
NEDD4L-225ENST00000589054 NKX6-2Q9C056 277 aaPredicted RBP13.96□□□□□ -0.17
NEDD4L-225ENST00000589054 PHLDA3Q9Y5J5 127 aa13.96□□□□□ -0.17
NEDD4L-225ENST00000589054 IGKV2D-24A0A075B6R9 120 aa13.95□□□□□ -0.18
NEDD4L-225ENST00000589054 SMLR1H3BR10 107 aa13.95□□□□□ -0.18
NEDD4L-225ENST00000589054 UBE2D3P61077 147 aa13.95□□□□□ -0.18
NEDD4L-225ENST00000589054 UBE2D2P62837 147 aa13.95□□□□□ -0.18
NEDD4L-225ENST00000589054 RPL19P84098 196 aaKnown RBP13.95□□□□□ -0.18
NEDD4L-225ENST00000589054 TOR2AQ5JU69 321 aa13.95□□□□□ -0.18
NEDD4L-225ENST00000589054 SCXQ7RTU7 201 aa13.95□□□□□ -0.18
NEDD4L-225ENST00000589054 FMC1Q96HJ9 113 aa13.95□□□□□ -0.18
NEDD4L-225ENST00000589054 TPT1P13693 172 aaKnown RBP13.94□□□□□ -0.18
NEDD4L-225ENST00000589054 CST9LP1Q5W188 147 aa13.94□□□□□ -0.18
NEDD4L-225ENST00000589054 UBE2WQ96B02 151 aa13.94□□□□□ -0.18
NEDD4L-225ENST00000589054 ARPC5O15511 151 aa13.93□□□□□ -0.18
NEDD4L-225ENST00000589054 UBE2G1P62253 170 aa13.93□□□□□ -0.18
NEDD4L-225ENST00000589054 RGS21Q2M5E4 152 aa13.93□□□□□ -0.18
NEDD4L-225ENST00000589054 PAGE4O60829 102 aa13.92□□□□□ -0.18
NEDD4L-225ENST00000589054 ATRAIDQ6UW56 229 aa13.92□□□□□ -0.18
NEDD4L-225ENST00000589054 RBFOX3A6NFN3 312 aa13.91□□□□□ -0.18
NEDD4L-225ENST00000589054 ENHOQ6UWT2 76 aa13.91□□□□□ -0.18
NEDD4L-225ENST00000589054 ZFP82Q8N141 532 aa13.91□□□□□ -0.18
NEDD4L-225ENST00000589054 OR10AG1Q8NH19 301 aa13.91□□□□□ -0.18
NEDD4L-225ENST00000589054 COX11Q9Y6N1 276 aa13.91□□□□□ -0.18
NEDD4L-225ENST00000589054 HMCN2Q8NDA2 5059 aa13.91□□□□□ -0.18
NEDD4L-225ENST00000589054 TRBV7-3A0A075B6L6 115 aa13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 MUC21A0A0G2JKD1 596 aa13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 TRBV10-1A0A0K0K1A3 114 aa13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 MUC21A0A140T8X8 626 aa13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 J3QL48 77 aa13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 PLA2G1BP04054 148 aaKnown RBP13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 AKR1C3P42330 323 aa13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 Q8N976 141 aa13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 NEXN-AS1Q8NBZ9 246 aa13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 OR10G8Q8NGN5 311 aa13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 MLST8Q9BVC4 326 aa13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 URGCP-MRPS24S4R325 110 aa13.9□□□□□ -0.18
NEDD4L-225ENST00000589054 A0A1B0GV50 99 aa13.89□□□□□ -0.19
NEDD4L-225ENST00000589054 KRTAP29-1A8MX34 341 aaPredicted RBP13.89□□□□□ -0.19
NEDD4L-225ENST00000589054 RPL36AP83881 106 aaKnown RBP13.89□□□□□ -0.19
NEDD4L-225ENST00000589054 PRR27Q6MZM9 219 aa13.89□□□□□ -0.19
NEDD4L-225ENST00000589054 CIRBP-AS1Q8TBR5 109 aa13.89□□□□□ -0.19
NEDD4L-225ENST00000589054 RPL36ALQ969Q0 106 aaKnown RBP13.89□□□□□ -0.19
NEDD4L-225ENST00000589054 PKHD1L1Q86WI1 4243 aa13.88□□□□□ -0.19
NEDD4L-225ENST00000589054 A0A087WX48 190 aa13.88□□□□□ -0.19
NEDD4L-225ENST00000589054 SCO2A0A1W2PP80 73 aa13.88□□□□□ -0.19
NEDD4L-225ENST00000589054 RMI2Q96E14 147 aa13.88□□□□□ -0.19
NEDD4L-225ENST00000589054 CHAC1Q9BUX1 264 aa13.88□□□□□ -0.19
NEDD4L-225ENST00000589054 TRBV6-8A0A0A6YYG3 113 aa13.87□□□□□ -0.19
NEDD4L-225ENST00000589054 MPV17L2Q567V2 206 aa13.87□□□□□ -0.19
NEDD4L-225ENST00000589054 MBD3L1Q8WWY6 194 aa13.87□□□□□ -0.19
NEDD4L-225ENST00000589054 CHCHD7Q9BUK0 85 aa13.87□□□□□ -0.19
NEDD4L-225ENST00000589054 NTM-AS1Q6ZSK4 140 aa13.86□□□□□ -0.19
NEDD4L-225ENST00000589054 TCEAL7Q9BRU2 100 aa13.86□□□□□ -0.19
NEDD4L-225ENST00000589054 SSBP4Q9BWG4 385 aaPredicted RBP13.86□□□□□ -0.19
NEDD4L-225ENST00000589054 TMEM262E9PQX1 116 aa13.85□□□□□ -0.19
NEDD4L-225ENST00000589054 SNAI2O43623 268 aa13.85□□□□□ -0.19
NEDD4L-225ENST00000589054 RAB4BP61018 213 aa13.85□□□□□ -0.19
NEDD4L-225ENST00000589054 STOML3Q8TAV4 291 aa13.85□□□□□ -0.19
NEDD4L-225ENST00000589054 SFT2D1Q8WV19 159 aa13.85□□□□□ -0.19
NEDD4L-225ENST00000589054 SSTP61278 116 aa13.84□□□□□ -0.19
NEDD4L-225ENST00000589054 KCNRGQ8N5I3 272 aa13.84□□□□□ -0.19
NEDD4L-225ENST00000589054 C15orf54Q8N8G6 183 aa13.84□□□□□ -0.19
NEDD4L-225ENST00000589054 FAM213BQ8TBF2 198 aa13.84□□□□□ -0.19
NEDD4L-225ENST00000589054 DEFB104AQ8WTQ1 72 aa13.84□□□□□ -0.19
NEDD4L-225ENST00000589054 KIF25-AS1Q9Y6Z4 181 aa13.84□□□□□ -0.19
NEDD4L-225ENST00000589054 ELOBQ15370 118 aa13.83□□□□□ -0.2
NEDD4L-225ENST00000589054 ZNF56Q15929 161 aa13.83□□□□□ -0.2
NEDD4L-225ENST00000589054 BAGE2Q86Y30 109 aa13.83□□□□□ -0.2
NEDD4L-225ENST00000589054 CXCL1P09341 107 aa13.82□□□□□ -0.2
NEDD4L-225ENST00000589054 SEC11BP0C7V7 166 aa13.82□□□□□ -0.2
NEDD4L-225ENST00000589054 KRTAP26-1Q6PEX3 210 aa13.82□□□□□ -0.2
NEDD4L-225ENST00000589054 Q0VG73 95 aa13.81□□□□□ -0.2
NEDD4L-225ENST00000589054 C1orf43Q9BWL3 253 aa13.81□□□□□ -0.2
NEDD4L-225ENST00000589054 ZNF471Q9BX82 626 aaPredicted RBP13.81□□□□□ -0.2
NEDD4L-225ENST00000589054 OR5AL1P0C617 328 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms