RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CIDEAO60543 219 aa13.24□□□□□ -0.29
CLPTM1-209ENST00000588855 NUDT3O95989 172 aa13.24□□□□□ -0.29
CLPTM1-209ENST00000588855 CRYGDP07320 174 aa13.24□□□□□ -0.29
CLPTM1-209ENST00000588855 GATA1P15976 413 aaPredicted RBP13.24□□□□□ -0.29
CLPTM1-209ENST00000588855 SLAQ13239 276 aa13.24□□□□□ -0.29
CLPTM1-209ENST00000588855 ZFP2Q6ZN57 461 aa13.24□□□□□ -0.29
CLPTM1-209ENST00000588855 C15orf53Q8NAA6 179 aa13.24□□□□□ -0.29
CLPTM1-209ENST00000588855 CNFNQ9BYD5 112 aa13.24□□□□□ -0.29
CLPTM1-209ENST00000588855 HIGD1CA8MV81 97 aa13.23□□□□□ -0.29
CLPTM1-209ENST00000588855 RHODO00212 210 aa13.23□□□□□ -0.29
CLPTM1-209ENST00000588855 GFRA4Q9GZZ7 299 aa13.23□□□□□ -0.29
CLPTM1-209ENST00000588855 FAM231BA6NCW3 169 aa13.23□□□□□ -0.29
CLPTM1-209ENST00000588855 H3BNG1 76 aa13.23□□□□□ -0.29
CLPTM1-209ENST00000588855 NTF3P20783 257 aa13.23□□□□□ -0.29
CLPTM1-209ENST00000588855 FOXA3P55318 350 aaPredicted RBP13.23□□□□□ -0.29
CLPTM1-209ENST00000588855 RNF212Q495C1 297 aa13.23□□□□□ -0.29
CLPTM1-209ENST00000588855 Q6ZSN1 163 aa13.23□□□□□ -0.29
CLPTM1-209ENST00000588855 AP1S3Q96PC3 154 aa13.23□□□□□ -0.29
CLPTM1-209ENST00000588855 WDR73Q6P4I2 378 aa13.22□□□□□ -0.29
CLPTM1-209ENST00000588855 C14orf178Q8N769 122 aaPredicted RBP13.22□□□□□ -0.29
CLPTM1-209ENST00000588855 SLC25A29Q8N8R3 303 aa13.22□□□□□ -0.29
CLPTM1-209ENST00000588855 LOC100131303A0A0U1RQF7 123 aa13.21□□□□□ -0.29
CLPTM1-209ENST00000588855 C10orf91Q5T1B1 145 aa13.21□□□□□ -0.29
CLPTM1-209ENST00000588855 HYDINQ4G0P3 5121 aa13.2□□□□□ -0.3
CLPTM1-209ENST00000588855 SMIM27A0A1W2PRY6 76 aa13.2□□□□□ -0.3
CLPTM1-209ENST00000588855 TWIST1Q15672 202 aa13.2□□□□□ -0.3
CLPTM1-209ENST00000588855 NUP35Q8NFH5 326 aa13.2□□□□□ -0.3
CLPTM1-209ENST00000588855 KIF25-AS1Q9Y6Z4 181 aa13.2□□□□□ -0.3
CLPTM1-209ENST00000588855 A0A096LPF7 62 aa13.19□□□□□ -0.3
CLPTM1-209ENST00000588855 TRBV6-4A0A1B0GX49 114 aa13.19□□□□□ -0.3
CLPTM1-209ENST00000588855 PPP1R2P9O14990 202 aa13.19□□□□□ -0.3
CLPTM1-209ENST00000588855 GYPEP15421 78 aa13.19□□□□□ -0.3
CLPTM1-209ENST00000588855 NAT8BQ9UHF3 227 aa13.19□□□□□ -0.3
CLPTM1-209ENST00000588855 CARHSP1Q9Y2V2 147 aaKnown RBP13.19□□□□□ -0.3
CLPTM1-209ENST00000588855 ICOSQ9Y6W8 199 aa13.19□□□□□ -0.3
CLPTM1-209ENST00000588855 RYR2Q92736 4967 aa13.19□□□□□ -0.3
CLPTM1-209ENST00000588855 MT-ND4LP03901 98 aa13.18□□□□□ -0.3
CLPTM1-209ENST00000588855 TRGC1P0CF51 173 aa13.18□□□□□ -0.3
CLPTM1-209ENST00000588855 SMIM17P0DL12 118 aa13.18□□□□□ -0.3
CLPTM1-209ENST00000588855 EVI2AP22794 236 aa13.18□□□□□ -0.3
CLPTM1-209ENST00000588855 RHOHQ15669 191 aa13.18□□□□□ -0.3
CLPTM1-209ENST00000588855 LINC00476Q8WZB0 136 aa13.18□□□□□ -0.3
CLPTM1-209ENST00000588855 BORCS7Q96B45 105 aa13.18□□□□□ -0.3
CLPTM1-209ENST00000588855 K7EQD1 137 aa13.18□□□□□ -0.3
CLPTM1-209ENST00000588855 LINC00315P59091 139 aa13.18□□□□□ -0.3
CLPTM1-209ENST00000588855 ZNF56Q15929 161 aa13.18□□□□□ -0.3
CLPTM1-209ENST00000588855 ANAPC16Q96DE5 110 aa13.18□□□□□ -0.3
CLPTM1-209ENST00000588855 DNAH6Q9C0G6 4158 aa13.17□□□□□ -0.3
CLPTM1-209ENST00000588855 A0A1B0GUT8 65 aa13.17□□□□□ -0.3
CLPTM1-209ENST00000588855 PRADC1Q9BSG0 188 aa13.17□□□□□ -0.3
CLPTM1-209ENST00000588855 MGPP08493 103 aa13.16□□□□□ -0.3
CLPTM1-209ENST00000588855 LGALS9CQ6DKI2 356 aa13.16□□□□□ -0.3
CLPTM1-209ENST00000588855 SLC7A5P1Q8MH63 180 aa13.16□□□□□ -0.3
CLPTM1-209ENST00000588855 DPH3P1Q9H4G8 78 aa13.16□□□□□ -0.3
CLPTM1-209ENST00000588855 Q9UF83 564 aa13.16□□□□□ -0.3
CLPTM1-209ENST00000588855 LCE6AA0A183 80 aa13.15□□□□□ -0.3
CLPTM1-209ENST00000588855 LY6G6CO95867 125 aa13.15□□□□□ -0.3
CLPTM1-209ENST00000588855 P0DMU3 169 aa13.15□□□□□ -0.3
CLPTM1-209ENST00000588855 FAM231AP0DMU4 169 aa13.15□□□□□ -0.3
CLPTM1-209ENST00000588855 FAM231CP0DMU5 169 aa13.15□□□□□ -0.3
CLPTM1-209ENST00000588855 RAB4BP61018 213 aa13.15□□□□□ -0.3
CLPTM1-209ENST00000588855 MRPL23Q16540 153 aaKnown RBP13.15□□□□□ -0.3
CLPTM1-209ENST00000588855 KMT2AQ03164 3969 aa13.14□□□□□ -0.31
CLPTM1-209ENST00000588855 F5H697 171 aa13.14□□□□□ -0.31
CLPTM1-209ENST00000588855 SRIP30626 198 aa13.14□□□□□ -0.31
CLPTM1-209ENST00000588855 RIGQ13278 110 aa13.13□□□□□ -0.31
CLPTM1-209ENST00000588855 SMIM15Q7Z3B0 74 aa13.13□□□□□ -0.31
CLPTM1-209ENST00000588855 RYR3Q15413 4870 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 GAGE12JA6NER3 117 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 APOC3P02656 99 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 GAGE1Q13065 139 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 GAGE4Q13068 117 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 GAGE5Q13069 117 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 ESRGQ1W209 222 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 GAGE13Q4V321 117 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 SUMO4Q6EEV6 95 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 NEGR1Q7Z3B1 354 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 UBE2DNLQ8IWF7 75 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 CLRN3Q8NCR9 226 aa13.12□□□□□ -0.31
CLPTM1-209ENST00000588855 LINC00694P0DN24 101 aa13.11□□□□□ -0.31
CLPTM1-209ENST00000588855 FAM3BP58499 235 aaPredicted RBP13.11□□□□□ -0.31
CLPTM1-209ENST00000588855 MRPL54Q6P161 138 aaKnown RBP13.11□□□□□ -0.31
CLPTM1-209ENST00000588855 CTDSP1Q9GZU7 261 aa13.11□□□□□ -0.31
CLPTM1-209ENST00000588855 LINC00588Q9Y4M8 146 aa13.11□□□□□ -0.31
CLPTM1-209ENST00000588855 C7orf77A4D0Y5 90 aa13.1□□□□□ -0.31
CLPTM1-209ENST00000588855 CCL18P55774 89 aa13.1□□□□□ -0.31
CLPTM1-209ENST00000588855 NDUFA5Q16718 116 aa13.1□□□□□ -0.31
CLPTM1-209ENST00000588855 TRBV10-1A0A0K0K1A3 114 aa13.09□□□□□ -0.31
CLPTM1-209ENST00000588855 NEXN-AS1Q8NBZ9 246 aa13.09□□□□□ -0.31
CLPTM1-209ENST00000588855 TMEM191AQ9H0A3 160 aa13.09□□□□□ -0.31
CLPTM1-209ENST00000588855 A0A1B0GXF2 115 aa13.08□□□□□ -0.31
CLPTM1-209ENST00000588855 M0QY20 66 aa13.08□□□□□ -0.31
CLPTM1-209ENST00000588855 CAMPP49913 170 aa13.08□□□□□ -0.31
CLPTM1-209ENST00000588855 RHEBQ15382 184 aa13.08□□□□□ -0.31
CLPTM1-209ENST00000588855 LYPD5Q6UWN5 251 aa13.08□□□□□ -0.31
CLPTM1-209ENST00000588855 TRAV26-2A0A0B4J265 109 aa13.08□□□□□ -0.32
CLPTM1-209ENST00000588855 SH2D6Q7Z4S9 175 aa13.08□□□□□ -0.32
CLPTM1-209ENST00000588855 SVBPQ8N300 66 aa13.08□□□□□ -0.32
CLPTM1-209ENST00000588855 ZNRF2Q8NHG8 242 aa13.08□□□□□ -0.32
CLPTM1-209ENST00000588855 RPS10P5Q9NQ39 176 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms