RNA–Protein interactions for RNA: ENST00000588640.5

GFAP-213, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-213ENST00000588640 FAM74A7A6NL05 159 aa11.91□□□□□ -0.5
GFAP-213ENST00000588640 KRBOX1C9JBD0 128 aa11.91□□□□□ -0.5
GFAP-213ENST00000588640 SH2D1AO60880 128 aa11.91□□□□□ -0.5
GFAP-213ENST00000588640 GIPP09681 153 aaPredicted RBP11.91□□□□□ -0.5
GFAP-213ENST00000588640 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
GFAP-213ENST00000588640 HIST1H2BAQ96A08 127 aa11.91□□□□□ -0.5
GFAP-213ENST00000588640 PHLDA3Q9Y5J5 127 aa11.91□□□□□ -0.5
GFAP-213ENST00000588640 COX11Q9Y6N1 276 aa11.91□□□□□ -0.5
GFAP-213ENST00000588640 IGKV2D-24A0A075B6R9 120 aa11.9□□□□□ -0.5
GFAP-213ENST00000588640 M0R381 172 aa11.9□□□□□ -0.5
GFAP-213ENST00000588640 UBE2G1P62253 170 aa11.9□□□□□ -0.5
GFAP-213ENST00000588640 AKR1C8PQ5T2L2 129 aa11.9□□□□□ -0.5
GFAP-213ENST00000588640 FAM162BQ5T6X4 162 aa11.9□□□□□ -0.5
GFAP-213ENST00000588640 DNAJC30Q96LL9 226 aa11.9□□□□□ -0.5
GFAP-213ENST00000588640 NKX6-2Q9C056 277 aaPredicted RBP11.9□□□□□ -0.5
GFAP-213ENST00000588640 TMSB15BA0A087X1C1 80 aa11.89□□□□□ -0.51
GFAP-213ENST00000588640 TPT1P13693 172 aaKnown RBP11.89□□□□□ -0.51
GFAP-213ENST00000588640 CRIP1P50238 77 aa11.89□□□□□ -0.51
GFAP-213ENST00000588640 DNLZQ5SXM8 178 aa11.89□□□□□ -0.51
GFAP-213ENST00000588640 NIT1Q86X76 327 aa11.89□□□□□ -0.51
GFAP-213ENST00000588640 FMC1Q96HJ9 113 aa11.89□□□□□ -0.51
GFAP-213ENST00000588640 KLK12Q9UKR0 248 aa11.89□□□□□ -0.51
GFAP-213ENST00000588640 A0A087WX48 190 aa11.88□□□□□ -0.51
GFAP-213ENST00000588640 MAP1LC3B2A6NCE7 125 aa11.88□□□□□ -0.51
GFAP-213ENST00000588640 RBFOX3A6NFN3 312 aa11.88□□□□□ -0.51
GFAP-213ENST00000588640 SEC11BP0C7V7 166 aa11.88□□□□□ -0.51
GFAP-213ENST00000588640 SCXQ7RTU7 201 aa11.88□□□□□ -0.51
GFAP-213ENST00000588640 MAP1LC3BQ9GZQ8 125 aa11.88□□□□□ -0.51
GFAP-213ENST00000588640 ZFP30Q9Y2G7 519 aa11.88□□□□□ -0.51
GFAP-213ENST00000588640 KCNIP4Q6PIL6 250 aa11.87□□□□□ -0.51
GFAP-213ENST00000588640 UBE2WQ96B02 151 aa11.87□□□□□ -0.51
GFAP-213ENST00000588640 SFRP2Q96HF1 295 aa11.87□□□□□ -0.51
GFAP-213ENST00000588640 LINC01559Q495D7 138 aa11.86□□□□□ -0.51
GFAP-213ENST00000588640 ZFP82Q8N141 532 aa11.86□□□□□ -0.51
GFAP-213ENST00000588640 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
GFAP-213ENST00000588640 CST9LP1Q5W188 147 aa11.85□□□□□ -0.51
GFAP-213ENST00000588640 COX8CQ7Z4L0 72 aa11.85□□□□□ -0.51
GFAP-213ENST00000588640 Q8N976 141 aa11.85□□□□□ -0.51
GFAP-213ENST00000588640 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
GFAP-213ENST00000588640 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
GFAP-213ENST00000588640 LTAP01374 205 aa11.84□□□□□ -0.51
GFAP-213ENST00000588640 AKR1C3P42330 323 aa11.84□□□□□ -0.51
GFAP-213ENST00000588640 ZNF674Q2M3X9 581 aa11.84□□□□□ -0.51
GFAP-213ENST00000588640 DEFB104AQ8WTQ1 72 aa11.84□□□□□ -0.51
GFAP-213ENST00000588640 CHCHD7Q9BUK0 85 aa11.84□□□□□ -0.51
GFAP-213ENST00000588640 TRBV7-3A0A075B6L6 115 aa11.83□□□□□ -0.52
GFAP-213ENST00000588640 UBE2D3P61077 147 aa11.83□□□□□ -0.52
GFAP-213ENST00000588640 UBE2D2P62837 147 aa11.83□□□□□ -0.52
GFAP-213ENST00000588640 ELOBQ15370 118 aa11.83□□□□□ -0.52
GFAP-213ENST00000588640 STOML3Q8TAV4 291 aa11.83□□□□□ -0.52
GFAP-213ENST00000588640 TCEAL7Q9BRU2 100 aa11.83□□□□□ -0.52
GFAP-213ENST00000588640 ARPC5O15511 151 aa11.82□□□□□ -0.52
GFAP-213ENST00000588640 ZNF56Q15929 161 aa11.82□□□□□ -0.52
GFAP-213ENST00000588640 TRBV6-1A0A0K0K1D8 114 aa11.81□□□□□ -0.52
GFAP-213ENST00000588640 CRPP02741 224 aa11.81□□□□□ -0.52
GFAP-213ENST00000588640 ATRAIDQ6UW56 229 aa11.81□□□□□ -0.52
GFAP-213ENST00000588640 CHAC1Q9BUX1 264 aa11.81□□□□□ -0.52
GFAP-213ENST00000588640 C1orf43Q9BWL3 253 aa11.81□□□□□ -0.52
GFAP-213ENST00000588640 TMEM262E9PQX1 116 aa11.8□□□□□ -0.52
GFAP-213ENST00000588640 FHITP49789 147 aa11.8□□□□□ -0.52
GFAP-213ENST00000588640 RPL19P84098 196 aaKnown RBP11.8□□□□□ -0.52
GFAP-213ENST00000588640 Q0VG73 95 aa11.8□□□□□ -0.52
GFAP-213ENST00000588640 BATF3Q9NR55 127 aa11.8□□□□□ -0.52
GFAP-213ENST00000588640 KRTAP29-1A8MX34 341 aaPredicted RBP11.79□□□□□ -0.52
GFAP-213ENST00000588640 G3V3Q6 166 aa11.79□□□□□ -0.52
GFAP-213ENST00000588640 MPV17L2Q567V2 206 aa11.79□□□□□ -0.52
GFAP-213ENST00000588640 C15orf54Q8N8G6 183 aa11.79□□□□□ -0.52
GFAP-213ENST00000588640 OR10AG1Q8NH19 301 aa11.79□□□□□ -0.52
GFAP-213ENST00000588640 TRBV6-8A0A0A6YYG3 113 aa11.78□□□□□ -0.52
GFAP-213ENST00000588640 PAGE4O60829 102 aa11.78□□□□□ -0.52
GFAP-213ENST00000588640 HLA-DQA1P01909 254 aa11.78□□□□□ -0.52
GFAP-213ENST00000588640 RAB4BP61018 213 aa11.78□□□□□ -0.52
GFAP-213ENST00000588640 C14orf177Q52M58 125 aa11.78□□□□□ -0.52
GFAP-213ENST00000588640 NEXN-AS1Q8NBZ9 246 aa11.78□□□□□ -0.52
GFAP-213ENST00000588640 OR10G8Q8NGN5 311 aa11.78□□□□□ -0.52
GFAP-213ENST00000588640 CIRBP-AS1Q8TBR5 109 aa11.78□□□□□ -0.52
GFAP-213ENST00000588640 CYTL1Q9NRR1 136 aa11.78□□□□□ -0.52
GFAP-213ENST00000588640 A0A1B0GV50 99 aa11.77□□□□□ -0.53
GFAP-213ENST00000588640 ANGP03950 147 aaKnown RBP11.77□□□□□ -0.53
GFAP-213ENST00000588640 PKHD1L1Q86WI1 4243 aa11.77□□□□□ -0.53
GFAP-213ENST00000588640 SCO2A0A1W2PP80 73 aa11.76□□□□□ -0.53
GFAP-213ENST00000588640 PFDN1O60925 122 aa11.76□□□□□ -0.53
GFAP-213ENST00000588640 ENHOQ6UWT2 76 aa11.76□□□□□ -0.53
GFAP-213ENST00000588640 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.76□□□□□ -0.53
GFAP-213ENST00000588640 CHCHD5Q9BSY4 110 aa11.76□□□□□ -0.53
GFAP-213ENST00000588640 ZNF471Q9BX82 626 aaPredicted RBP11.76□□□□□ -0.53
GFAP-213ENST00000588640 MUC21A0A0G2JKD1 596 aa11.75□□□□□ -0.53
GFAP-213ENST00000588640 MUC21A0A140T8X8 626 aa11.75□□□□□ -0.53
GFAP-213ENST00000588640 F5H697 171 aa11.75□□□□□ -0.53
GFAP-213ENST00000588640 PRR27Q6MZM9 219 aa11.75□□□□□ -0.53
GFAP-213ENST00000588640 FAM213BQ8TBF2 198 aa11.75□□□□□ -0.53
GFAP-213ENST00000588640 LRP1Q07954 4544 aaKnown RBP11.75□□□□□ -0.53
GFAP-213ENST00000588640 SMLR1H3BR10 107 aa11.74□□□□□ -0.53
GFAP-213ENST00000588640 CXCL1P09341 107 aa11.74□□□□□ -0.53
GFAP-213ENST00000588640 KRTAP10-4P60372 401 aaPredicted RBP11.74□□□□□ -0.53
GFAP-213ENST00000588640 SSTP61278 116 aa11.74□□□□□ -0.53
GFAP-213ENST00000588640 SPANXN1Q5VSR9 72 aa11.74□□□□□ -0.53
GFAP-213ENST00000588640 CLPSL2Q6UWE3 100 aa11.74□□□□□ -0.53
GFAP-213ENST00000588640 SFT2D1Q8WV19 159 aa11.74□□□□□ -0.53
GFAP-213ENST00000588640 USP17L23D6RBM5 183 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms