RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 UBE2CO00762 179 aa18.73■□□□□ 0.59
SCAMP4-210ENST00000588555 NCR2O95944 276 aa18.73■□□□□ 0.59
SCAMP4-210ENST00000588555 CRYGDP07320 174 aa18.73■□□□□ 0.59
SCAMP4-210ENST00000588555 LINC00310P59036 64 aa18.73■□□□□ 0.59
SCAMP4-210ENST00000588555 IQCJQ1A5X6 159 aa18.73■□□□□ 0.59
SCAMP4-210ENST00000588555 SAMD10Q9BYL1 202 aa18.73■□□□□ 0.59
SCAMP4-210ENST00000588555 A0A087WWL8 130 aa18.72■□□□□ 0.59
SCAMP4-210ENST00000588555 PPBPP02775 128 aa18.72■□□□□ 0.59
SCAMP4-210ENST00000588555 HOXA5P20719 270 aa18.72■□□□□ 0.59
SCAMP4-210ENST00000588555 PRELID3AQ96N28 172 aa18.72■□□□□ 0.59
SCAMP4-210ENST00000588555 LOC105371267A0A1B0GV96 52 aa18.71■□□□□ 0.59
SCAMP4-210ENST00000588555 DAZ2Q13117 558 aaKnown RBP18.71■□□□□ 0.59
SCAMP4-210ENST00000588555 RASL10AQ92737 203 aa18.71■□□□□ 0.59
SCAMP4-210ENST00000588555 MRPL16Q9NX20 251 aaKnown RBP18.71■□□□□ 0.59
SCAMP4-210ENST00000588555 TRAV26-2A0A0B4J265 109 aa18.7■□□□□ 0.58
SCAMP4-210ENST00000588555 SMIM17P0DL12 118 aa18.7■□□□□ 0.58
SCAMP4-210ENST00000588555 KPRPQ5T749 579 aaPredicted RBP18.7■□□□□ 0.58
SCAMP4-210ENST00000588555 BAGE3Q86Y29 109 aa18.7■□□□□ 0.58
SCAMP4-210ENST00000588555 GATA1P15976 413 aaPredicted RBP18.69■□□□□ 0.58
SCAMP4-210ENST00000588555 MRAP2Q96G30 205 aa18.69■□□□□ 0.58
SCAMP4-210ENST00000588555 NDUFAF3Q9BU61 184 aa18.69■□□□□ 0.58
SCAMP4-210ENST00000588555 SMIM9A6NGZ8 99 aa18.68■□□□□ 0.58
SCAMP4-210ENST00000588555 NUPR1O60356 82 aa18.68■□□□□ 0.58
SCAMP4-210ENST00000588555 NPYP01303 97 aa18.68■□□□□ 0.58
SCAMP4-210ENST00000588555 MGPP08493 103 aa18.68■□□□□ 0.58
SCAMP4-210ENST00000588555 Q6ZWC4 215 aa18.68■□□□□ 0.58
SCAMP4-210ENST00000588555 SERF1AO75920 110 aa18.68■□□□□ 0.58
SCAMP4-210ENST00000588555 FAM74A4Q5TZK3 123 aa18.68■□□□□ 0.58
SCAMP4-210ENST00000588555 HIST3H2BBQ8N257 126 aa18.68■□□□□ 0.58
SCAMP4-210ENST00000588555 OVOL2Q9BRP0 275 aa18.68■□□□□ 0.58
SCAMP4-210ENST00000588555 NOP10Q9NPE3 64 aaKnown RBP18.68■□□□□ 0.58
SCAMP4-210ENST00000588555 NACAE9PAV3 2078 aa18.67■□□□□ 0.58
SCAMP4-210ENST00000588555 A8MWV9 139 aa18.67■□□□□ 0.58
SCAMP4-210ENST00000588555 LGALS9BQ3B8N2 356 aa18.67■□□□□ 0.58
SCAMP4-210ENST00000588555 UFSP1Q6NVU6 142 aa18.67■□□□□ 0.58
SCAMP4-210ENST00000588555 NRACQ8N912 160 aa18.67■□□□□ 0.58
SCAMP4-210ENST00000588555 CFAP126Q5VTH2 177 aa18.66■□□□□ 0.58
SCAMP4-210ENST00000588555 Q6ZTI0 123 aa18.66■□□□□ 0.58
SCAMP4-210ENST00000588555 RNF183Q96D59 192 aa18.66■□□□□ 0.58
SCAMP4-210ENST00000588555 URB1-AS1Q96HZ7 61 aa18.66■□□□□ 0.58
SCAMP4-210ENST00000588555 LAMTOR2Q9Y2Q5 125 aa18.66■□□□□ 0.58
SCAMP4-210ENST00000588555 TRGV1A0A0A0MS02 117 aa18.65■□□□□ 0.58
SCAMP4-210ENST00000588555 IFITM10A6NMD0 228 aa18.65■□□□□ 0.58
SCAMP4-210ENST00000588555 TNFRSF6BO95407 300 aa18.65■□□□□ 0.58
SCAMP4-210ENST00000588555 ESDP10768 282 aa18.65■□□□□ 0.58
SCAMP4-210ENST00000588555 PDZD11Q5EBL8 140 aa18.65■□□□□ 0.58
SCAMP4-210ENST00000588555 DNHD1Q96M86 4753 aa18.65■□□□□ 0.58
SCAMP4-210ENST00000588555 OR11H2Q8NH07 326 aa18.64■□□□□ 0.57
SCAMP4-210ENST00000588555 RS1O15537 224 aa18.63■□□□□ 0.57
SCAMP4-210ENST00000588555 SUMO4Q6EEV6 95 aa18.63■□□□□ 0.57
SCAMP4-210ENST00000588555 PRB2P02812 416 aaPredicted RBP18.62■□□□□ 0.57
SCAMP4-210ENST00000588555 NIT1Q86X76 327 aa18.62■□□□□ 0.57
SCAMP4-210ENST00000588555 ZNF56Q15929 161 aa18.61■□□□□ 0.57
SCAMP4-210ENST00000588555 KRTAP21-3Q3LHN1 58 aa18.61■□□□□ 0.57
SCAMP4-210ENST00000588555 F5H697 171 aa18.6■□□□□ 0.57
SCAMP4-210ENST00000588555 RPL39LQ96EH5 51 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-210ENST00000588555 K7EIL1 84 aa18.59■□□□□ 0.57
SCAMP4-210ENST00000588555 EMP1P54849 157 aa18.59■□□□□ 0.57
SCAMP4-210ENST00000588555 IGHV3-73A0A0B4J1V6 119 aa18.58■□□□□ 0.57
SCAMP4-210ENST00000588555 LOC389332A0A1B0GUA5 103 aa18.58■□□□□ 0.57
SCAMP4-210ENST00000588555 PRSS47A8MTI9 375 aa18.58■□□□□ 0.57
SCAMP4-210ENST00000588555 M0QY20 66 aa18.58■□□□□ 0.57
SCAMP4-210ENST00000588555 RHODO00212 210 aa18.58■□□□□ 0.57
SCAMP4-210ENST00000588555 IFI27P40305 119 aaPredicted RBP18.58■□□□□ 0.57
SCAMP4-210ENST00000588555 Q8NAQ8 132 aa18.58■□□□□ 0.57
SCAMP4-210ENST00000588555 MAP1LC3AQ9H492 121 aa18.58■□□□□ 0.57
SCAMP4-210ENST00000588555 IGHV4-28A0A0C4DH34 117 aa18.58■□□□□ 0.56
SCAMP4-210ENST00000588555 LINC00614P0C842 121 aa18.58■□□□□ 0.56
SCAMP4-210ENST00000588555 MIFP14174 115 aa18.58■□□□□ 0.56
SCAMP4-210ENST00000588555 RNASEKQ6P5S7 137 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-210ENST00000588555 ZFP2Q6ZN57 461 aa18.58■□□□□ 0.56
SCAMP4-210ENST00000588555 EDA2RQ9HAV5 297 aa18.58■□□□□ 0.56
SCAMP4-210ENST00000588555 LINC00612Q8N6U2 182 aa18.57■□□□□ 0.56
SCAMP4-210ENST00000588555 CHCHD1Q96BP2 118 aaKnown RBP18.57■□□□□ 0.56
SCAMP4-210ENST00000588555 HIST1H2BLQ99880 126 aa18.57■□□□□ 0.56
SCAMP4-210ENST00000588555 TP53TG1Q9Y2A0 90 aa18.57■□□□□ 0.56
SCAMP4-210ENST00000588555 TRAV4A0A0B4J268 109 aa18.56■□□□□ 0.56
SCAMP4-210ENST00000588555 GAGE12BA1L429 117 aa18.56■□□□□ 0.56
SCAMP4-210ENST00000588555 GAGE7O76087 117 aa18.56■□□□□ 0.56
SCAMP4-210ENST00000588555 GAGE12FP0CL80 117 aa18.56■□□□□ 0.56
SCAMP4-210ENST00000588555 GAGE12GP0CL81 117 aa18.56■□□□□ 0.56
SCAMP4-210ENST00000588555 GAGE12IP0CL82 117 aa18.56■□□□□ 0.56
SCAMP4-210ENST00000588555 OR4C5Q8NGB2 326 aa18.56■□□□□ 0.56
SCAMP4-210ENST00000588555 PRSS3P2Q8NHM4 247 aa18.56■□□□□ 0.56
SCAMP4-210ENST00000588555 PPP1R17O96001 155 aa18.55■□□□□ 0.56
SCAMP4-210ENST00000588555 S100A2P29034 98 aa18.55■□□□□ 0.56
SCAMP4-210ENST00000588555 Q6ZSN1 163 aa18.55■□□□□ 0.56
SCAMP4-210ENST00000588555 ZNF479Q96JC4 524 aa18.55■□□□□ 0.56
SCAMP4-210ENST00000588555 IGLV2-18A0A075B6J9 118 aa18.55■□□□□ 0.56
SCAMP4-210ENST00000588555 C20orf78Q9BR46 151 aa18.55■□□□□ 0.56
SCAMP4-210ENST00000588555 SUMO2P61956 95 aaKnown RBP18.54■□□□□ 0.56
SCAMP4-210ENST00000588555 FABP4P15090 132 aa18.53■□□□□ 0.56
SCAMP4-210ENST00000588555 HSBP1O75506 76 aa18.53■□□□□ 0.56
SCAMP4-210ENST00000588555 IGHV3-53P01767 116 aa18.53■□□□□ 0.56
SCAMP4-210ENST00000588555 FA2HQ7L5A8 372 aa18.53■□□□□ 0.56
SCAMP4-210ENST00000588555 RETNQ9HD89 108 aa18.53■□□□□ 0.56
SCAMP4-210ENST00000588555 AP5S1Q9NUS5 200 aa18.53■□□□□ 0.56
SCAMP4-210ENST00000588555 TRGV2A0A075B6R0 118 aa18.52■□□□□ 0.55
SCAMP4-210ENST00000588555 DEFB4AO15263 64 aa18.52■□□□□ 0.55
SCAMP4-210ENST00000588555 FAM19A2Q8N3H0 131 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms