RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 C4orf3Q8WVX3 66 aa10.97□□□□□ -0.65
CCDC43-203ENST00000588210 MRAP2Q96G30 205 aa10.97□□□□□ -0.65
CCDC43-203ENST00000588210 GAGE10A6NGK3 116 aa10.96□□□□□ -0.65
CCDC43-203ENST00000588210 SMIM17P0DL12 118 aa10.96□□□□□ -0.65
CCDC43-203ENST00000588210 ARL3P36405 182 aa10.96□□□□□ -0.65
CCDC43-203ENST00000588210 C18orf65Q6ZTR6 163 aa10.96□□□□□ -0.65
CCDC43-203ENST00000588210 C20orf173Q96LM9 149 aa10.96□□□□□ -0.65
CCDC43-203ENST00000588210 GAGE12BA1L429 117 aa10.96□□□□□ -0.66
CCDC43-203ENST00000588210 H3BVH4 76 aa10.96□□□□□ -0.66
CCDC43-203ENST00000588210 Q6ZQT7 251 aa10.96□□□□□ -0.66
CCDC43-203ENST00000588210 A0A0G2JLM5 398 aa10.95□□□□□ -0.66
CCDC43-203ENST00000588210 K7EP34 96 aa10.95□□□□□ -0.66
CCDC43-203ENST00000588210 NDUFA4O00483 81 aa10.95□□□□□ -0.66
CCDC43-203ENST00000588210 SOCS3O14543 225 aa10.95□□□□□ -0.66
CCDC43-203ENST00000588210 GPHB5Q86YW7 130 aa10.95□□□□□ -0.66
CCDC43-203ENST00000588210 LINC00477Q96M19 166 aa10.95□□□□□ -0.66
CCDC43-203ENST00000588210 TRAV26-2A0A0B4J265 109 aa10.94□□□□□ -0.66
CCDC43-203ENST00000588210 H3BUT2 72 aa10.94□□□□□ -0.66
CCDC43-203ENST00000588210 OVOL1O14753 267 aa10.94□□□□□ -0.66
CCDC43-203ENST00000588210 PF4P02776 101 aa10.94□□□□□ -0.66
CCDC43-203ENST00000588210 USMG5Q96IX5 58 aa10.94□□□□□ -0.66
CCDC43-203ENST00000588210 ZFAND2AQ8N6M9 145 aa10.94□□□□□ -0.66
CCDC43-203ENST00000588210 CHAC1Q9BUX1 264 aa10.94□□□□□ -0.66
CCDC43-203ENST00000588210 SMIM2Q9BVW6 85 aa10.94□□□□□ -0.66
CCDC43-203ENST00000588210 LGALS1P09382 135 aaKnown RBP10.93□□□□□ -0.66
CCDC43-203ENST00000588210 C21orf62-AS1Q17RA5 79 aa10.93□□□□□ -0.66
CCDC43-203ENST00000588210 ZC2HC1BQ5TFG8 222 aa10.93□□□□□ -0.66
CCDC43-203ENST00000588210 UNQ9165/PRO28630Q6UXU0 137 aa10.93□□□□□ -0.66
CCDC43-203ENST00000588210 CMYA5Q8N3K9 4069 aa10.93□□□□□ -0.66
CCDC43-203ENST00000588210 A0A087WX48 190 aa10.93□□□□□ -0.66
CCDC43-203ENST00000588210 TRAV21A0A0B4J279 112 aa10.93□□□□□ -0.66
CCDC43-203ENST00000588210 CCL24O00175 119 aa10.93□□□□□ -0.66
CCDC43-203ENST00000588210 MED14OSP0DP75 135 aa10.93□□□□□ -0.66
CCDC43-203ENST00000588210 RNF151Q2KHN1 245 aa10.93□□□□□ -0.66
CCDC43-203ENST00000588210 GTSCR1Q86UQ5 136 aa10.93□□□□□ -0.66
CCDC43-203ENST00000588210 OR10J6PQ8NGY7 276 aa10.93□□□□□ -0.66
CCDC43-203ENST00000588210 MRPL35Q9NZE8 188 aaKnown RBP10.93□□□□□ -0.66
CCDC43-203ENST00000588210 TRBV12-3P01733 135 aa10.92□□□□□ -0.66
CCDC43-203ENST00000588210 IGHV3-11P01762 117 aa10.92□□□□□ -0.66
CCDC43-203ENST00000588210 DEFB136Q30KP8 78 aa10.92□□□□□ -0.66
CCDC43-203ENST00000588210 OR11H1Q8NG94 326 aa10.92□□□□□ -0.66
CCDC43-203ENST00000588210 RAX2Q96IS3 184 aa10.92□□□□□ -0.66
CCDC43-203ENST00000588210 WNK1Q9H4A3 2382 aa10.92□□□□□ -0.66
CCDC43-203ENST00000588210 A0A1W2PPM0 123 aa10.91□□□□□ -0.66
CCDC43-203ENST00000588210 FAM19A4Q96LR4 140 aa10.91□□□□□ -0.66
CCDC43-203ENST00000588210 TRBV25-1A0A075B6N4 114 aa10.91□□□□□ -0.66
CCDC43-203ENST00000588210 TRAV12-1A0A0B4J245 112 aa10.91□□□□□ -0.66
CCDC43-203ENST00000588210 K7ERU9 68 aa10.91□□□□□ -0.66
CCDC43-203ENST00000588210 FHL3Q13643 280 aa10.91□□□□□ -0.66
CCDC43-203ENST00000588210 APRG1Q8IVJ8 170 aa10.91□□□□□ -0.66
CCDC43-203ENST00000588210 WFDC9Q8NEX5 89 aa10.91□□□□□ -0.66
CCDC43-203ENST00000588210 RAB37Q96AX2 223 aa10.91□□□□□ -0.66
CCDC43-203ENST00000588210 DUX3Q96PT4 197 aa10.91□□□□□ -0.66
CCDC43-203ENST00000588210 TTTY13Q9BZ97 58 aa10.91□□□□□ -0.66
CCDC43-203ENST00000588210 K7EMI3 77 aa10.9□□□□□ -0.66
CCDC43-203ENST00000588210 SMIM13P0DJ93 91 aa10.9□□□□□ -0.66
CCDC43-203ENST00000588210 GCSHP23434 173 aa10.9□□□□□ -0.66
CCDC43-203ENST00000588210 PLNP26678 52 aa10.9□□□□□ -0.66
CCDC43-203ENST00000588210 ASIPP42127 132 aa10.9□□□□□ -0.66
CCDC43-203ENST00000588210 FXYD2P54710 66 aa10.9□□□□□ -0.66
CCDC43-203ENST00000588210 ORMDL2Q53FV1 153 aa10.9□□□□□ -0.66
CCDC43-203ENST00000588210 LINC00482Q8N8I6 264 aa10.9□□□□□ -0.66
CCDC43-203ENST00000588210 OR5A1Q8NGJ0 315 aa10.9□□□□□ -0.66
CCDC43-203ENST00000588210 C20orf78Q9BR46 151 aa10.9□□□□□ -0.66
CCDC43-203ENST00000588210 DPH3P1Q9H4G8 78 aa10.9□□□□□ -0.66
CCDC43-203ENST00000588210 TRBV7-9A0A0J9YWB2 115 aa10.89□□□□□ -0.67
CCDC43-203ENST00000588210 TM4SF20Q53R12 229 aa10.89□□□□□ -0.67
CCDC43-203ENST00000588210 NAA38Q9BRA0 125 aaKnown RBP10.89□□□□□ -0.67
CCDC43-203ENST00000588210 LINC01619G3V211 115 aa10.89□□□□□ -0.67
CCDC43-203ENST00000588210 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.89□□□□□ -0.67
CCDC43-203ENST00000588210 M0R381 172 aa10.89□□□□□ -0.67
CCDC43-203ENST00000588210 SUMO2P61956 95 aaKnown RBP10.89□□□□□ -0.67
CCDC43-203ENST00000588210 RASL10AQ92737 203 aa10.89□□□□□ -0.67
CCDC43-203ENST00000588210 TM2D2Q9BX73 214 aa10.89□□□□□ -0.67
CCDC43-203ENST00000588210 VWFP04275 2813 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 SPCS1Q9Y6A9 102 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 IGHV4OR15-8A0A075B7B6 117 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 A0A087WW49 117 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 F8VRH5 84 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 J3KRW8 73 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 S100A4P26447 101 aaKnown RBP10.88□□□□□ -0.67
CCDC43-203ENST00000588210 TAL2Q16559 108 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 ANXA2RQ3ZCQ2 193 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 CEND1Q8N111 149 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 TOMM6Q96B49 74 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 VPS25Q9BRG1 176 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 PHLDA3Q9Y5J5 127 aa10.88□□□□□ -0.67
CCDC43-203ENST00000588210 H7C1H1 209 aa10.87□□□□□ -0.67
CCDC43-203ENST00000588210 FABP2P12104 132 aa10.87□□□□□ -0.67
CCDC43-203ENST00000588210 PHLDA1Q8WV24 401 aaPredicted RBP10.87□□□□□ -0.67
CCDC43-203ENST00000588210 SAMD5Q5TGI4 173 aa10.86□□□□□ -0.67
CCDC43-203ENST00000588210 PKD1L1Q8TDX9 2849 aa10.86□□□□□ -0.67
CCDC43-203ENST00000588210 NXPH4O95158 308 aa10.86□□□□□ -0.67
CCDC43-203ENST00000588210 DEFB1P60022 68 aa10.86□□□□□ -0.67
CCDC43-203ENST00000588210 POM121L12Q8N7R1 296 aa10.86□□□□□ -0.67
CCDC43-203ENST00000588210 MAPKAPK5-AS1Q8N8E1 139 aa10.86□□□□□ -0.67
CCDC43-203ENST00000588210 C14orf178Q8N769 122 aaPredicted RBP10.85□□□□□ -0.67
CCDC43-203ENST00000588210 NEXN-AS1Q8NBZ9 246 aa10.85□□□□□ -0.67
CCDC43-203ENST00000588210 RPL39LQ96EH5 51 aaKnown RBP10.85□□□□□ -0.67
CCDC43-203ENST00000588210 SCGB3A1Q96QR1 104 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms