RNA–Protein interactions for RNA: ENST00000587539.1

ZNF404-202, Transcript of zinc finger protein 404, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF404, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-202ENST00000587539 LOC105371267A0A1B0GV96 52 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 IL5P05113 134 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 PIRTP0C851 137 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 SMIM6P0DI80 62 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 LINC00694P0DN24 101 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 ARPC4P59998 168 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 RPS25P62851 125 aaKnown RBP0.33□□□□□ -2.36
ZNF404-202ENST00000587539 CCDC58Q4VC31 144 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 Q6ZUT4 128 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 TSC22D3Q99576 134 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 FAM103A1Q9BTL3 118 aaKnown RBP0.33□□□□□ -2.36
ZNF404-202ENST00000587539 TMEM242Q9NWH2 141 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 NDUFA12Q9UI09 145 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 V9GYV3 84 aa0.33□□□□□ -2.36
ZNF404-202ENST00000587539 HELZP42694 1942 aaKnown RBP0.32□□□□□ -2.36
ZNF404-202ENST00000587539 FAM92AA1XBS5 289 aa0.32□□□□□ -2.36
ZNF404-202ENST00000587539 SNCGO76070 127 aa0.32□□□□□ -2.36
ZNF404-202ENST00000587539 CCL3L1P16619 93 aa0.32□□□□□ -2.36
ZNF404-202ENST00000587539 ELOF1P60002 83 aaKnown RBP0.32□□□□□ -2.36
ZNF404-202ENST00000587539 MIC13Q5XKP0 118 aa0.32□□□□□ -2.36
ZNF404-202ENST00000587539 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.32□□□□□ -2.36
ZNF404-202ENST00000587539 KRTAP19-3Q7Z4W3 81 aa0.32□□□□□ -2.36
ZNF404-202ENST00000587539 C4orf33Q8N1A6 199 aa0.32□□□□□ -2.36
ZNF404-202ENST00000587539 SMIM11BQ8TCY0 68 aa0.32□□□□□ -2.36
ZNF404-202ENST00000587539 LAMC3Q9Y6N6 1575 aa0.32□□□□□ -2.36
ZNF404-202ENST00000587539 PTPRMP28827 1452 aa0.32□□□□□ -2.36
ZNF404-202ENST00000587539 SOGA1O94964 1423 aa0.32□□□□□ -2.36
ZNF404-202ENST00000587539 TRPM7Q96QT4 1865 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 ADGRB1O14514 1584 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 NDUFB6O95139 128 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 HMGN1P05114 100 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 EMX2Q04743 252 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 C9orf116Q5BN46 136 aaPredicted RBP0.31□□□□□ -2.36
ZNF404-202ENST00000587539 SPINK6Q6UWN8 80 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 COX7B2Q8TF08 81 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 LOC285556D6RIA3 1793 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 GRIN2AQ12879 1464 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 NAIPQ13075 1403 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 PLXNA2O75051 1894 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 TRBV7-1A0A0A6YYK4 115 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 TRBV10-3A0A0K0K1G6 114 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 FAM25AB3EWG3 89 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 FAM25CB3EWG5 89 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 FAM25GB3EWG6 89 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 TFF1P04155 84 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 CBLN1P23435 193 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 C12orf73Q69YU5 71 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 ZNF818PQ6ZRF7 136 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 VMO1Q7Z5L0 202 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 C20orf197Q8N268 126 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 C1orf54Q8WWF1 131 aa0.31□□□□□ -2.36
ZNF404-202ENST00000587539 RBBP6Q7Z6E9 1792 aaKnown RBP0.3□□□□□ -2.36
ZNF404-202ENST00000587539 UNC13BO14795 1591 aa0.3□□□□□ -2.36
ZNF404-202ENST00000587539 ZNF518AQ6AHZ1 1483 aa0.3□□□□□ -2.36
ZNF404-202ENST00000587539 APOC4-APOC2K7ER74 178 aa0.3□□□□□ -2.36
ZNF404-202ENST00000587539 M0R129 80 aa0.3□□□□□ -2.36
ZNF404-202ENST00000587539 NPC2P61916 151 aa0.3□□□□□ -2.36
ZNF404-202ENST00000587539 SELENOWP63302 87 aa0.3□□□□□ -2.36
ZNF404-202ENST00000587539 ARL11Q969Q4 196 aa0.3□□□□□ -2.36
ZNF404-202ENST00000587539 CASZ1Q86V15 1759 aa0.3□□□□□ -2.36
ZNF404-202ENST00000587539 MAP2P11137 1827 aaKnown RBP0.29□□□□□ -2.36
ZNF404-202ENST00000587539 LRRC37A3O60309 1634 aa0.29□□□□□ -2.36
ZNF404-202ENST00000587539 ACYP2P14621 99 aa0.29□□□□□ -2.36
ZNF404-202ENST00000587539 SARNPP82979 210 aaKnown RBP0.29□□□□□ -2.36
ZNF404-202ENST00000587539 PDCD10Q9BUL8 212 aa0.29□□□□□ -2.36
ZNF404-202ENST00000587539 FAM107BQ9H098 131 aa0.29□□□□□ -2.36
ZNF404-202ENST00000587539 PROK2Q9HC23 129 aa0.29□□□□□ -2.36
ZNF404-202ENST00000587539 IFT140Q96RY7 1462 aa0.29□□□□□ -2.36
ZNF404-202ENST00000587539 TMEM14DPA8MWL7 114 aa0.29□□□□□ -2.36
ZNF404-202ENST00000587539 UBE2G1P62253 170 aa0.29□□□□□ -2.36
ZNF404-202ENST00000587539 SMR3AQ99954 134 aa0.29□□□□□ -2.36
ZNF404-202ENST00000587539 LAMB1P07942 1786 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 CFTRP13569 1480 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 CDK5RAP2Q96SN8 1893 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 NRXN2Q9P2S2 1712 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 SPAG17Q6Q759 2223 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 KIF13AQ9H1H9 1805 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 GVQW2A0A096LPI5 108 aaPredicted RBP0.28□□□□□ -2.36
ZNF404-202ENST00000587539 GCHFRP30047 84 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 UBE2D1P51668 147 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 EDDM3BP56851 147 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 CCL8P80075 99 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 COX6A2Q02221 97 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 AQP10Q96PS8 301 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 SEC11CQ9BY50 192 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 RERGLQ9H628 205 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 NAA60Q9H7X0 242 aa0.28□□□□□ -2.36
ZNF404-202ENST00000587539 TNS1Q9HBL0 1735 aaKnown RBP0.28□□□□□ -2.37
ZNF404-202ENST00000587539 PXDNQ92626 1479 aa0.28□□□□□ -2.37
ZNF404-202ENST00000587539 PIN1P1O15428 100 aa0.27□□□□□ -2.37
ZNF404-202ENST00000587539 PRH1P02810 166 aa0.27□□□□□ -2.37
ZNF404-202ENST00000587539 INSL4Q14641 139 aa0.27□□□□□ -2.37
ZNF404-202ENST00000587539 BAGE3Q86Y29 109 aa0.27□□□□□ -2.37
ZNF404-202ENST00000587539 SPTSSBQ8NFR3 76 aa0.27□□□□□ -2.37
ZNF404-202ENST00000587539 SNRNP25Q9BV90 132 aaKnown RBP0.27□□□□□ -2.37
ZNF404-202ENST00000587539 LINC00470Q9BZP3 86 aa0.27□□□□□ -2.37
ZNF404-202ENST00000587539 IBTKQ9P2D0 1353 aaPredicted RBP0.27□□□□□ -2.37
ZNF404-202ENST00000587539 SPTBP11277 2137 aa0.27□□□□□ -2.37
ZNF404-202ENST00000587539 NINQ8N4C6 2090 aa0.27□□□□□ -2.37
ZNF404-202ENST00000587539 A0A087WTM6 91 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms