RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 DNAJC30Q96LL9 226 aa12.72□□□□□ -0.37
TRAF4-216ENST00000586813 MED28Q9H204 178 aa12.72□□□□□ -0.37
TRAF4-216ENST00000586813 FAM74A7A6NL05 159 aa12.71□□□□□ -0.37
TRAF4-216ENST00000586813 KRTAP29-1A8MX34 341 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-216ENST00000586813 SH2D1AO60880 128 aa12.71□□□□□ -0.37
TRAF4-216ENST00000586813 SEC11BP0C7V7 166 aa12.71□□□□□ -0.37
TRAF4-216ENST00000586813 CRIP1P50238 77 aa12.71□□□□□ -0.37
TRAF4-216ENST00000586813 DEFB104AQ8WTQ1 72 aa12.71□□□□□ -0.37
TRAF4-216ENST00000586813 HIST1H2BAQ96A08 127 aa12.71□□□□□ -0.37
TRAF4-216ENST00000586813 IGKV2D-24A0A075B6R9 120 aa12.7□□□□□ -0.38
TRAF4-216ENST00000586813 RNF222A6NCQ9 220 aa12.7□□□□□ -0.38
TRAF4-216ENST00000586813 RBFOX3A6NFN3 312 aa12.7□□□□□ -0.38
TRAF4-216ENST00000586813 COX8CQ7Z4L0 72 aa12.7□□□□□ -0.38
TRAF4-216ENST00000586813 Q8N976 141 aa12.7□□□□□ -0.38
TRAF4-216ENST00000586813 INO80EQ8NBZ0 244 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-216ENST00000586813 NKX6-2Q9C056 277 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-216ENST00000586813 KLK12Q9UKR0 248 aa12.7□□□□□ -0.38
TRAF4-216ENST00000586813 A0A087WWL8 130 aa12.69□□□□□ -0.38
TRAF4-216ENST00000586813 BORCS7-ASMTA0A0B4J1R7 106 aa12.69□□□□□ -0.38
TRAF4-216ENST00000586813 GRIFINA4D1Z8 144 aa12.69□□□□□ -0.38
TRAF4-216ENST00000586813 FAM162BQ5T6X4 162 aa12.69□□□□□ -0.38
TRAF4-216ENST00000586813 SFRP2Q96HF1 295 aa12.69□□□□□ -0.38
TRAF4-216ENST00000586813 ZFP30Q9Y2G7 519 aa12.69□□□□□ -0.38
TRAF4-216ENST00000586813 PHLDA3Q9Y5J5 127 aa12.69□□□□□ -0.38
TRAF4-216ENST00000586813 M0R381 172 aa12.68□□□□□ -0.38
TRAF4-216ENST00000586813 GIPP09681 153 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-216ENST00000586813 A0A087WX48 190 aa12.67□□□□□ -0.38
TRAF4-216ENST00000586813 TPT1P13693 172 aaKnown RBP12.67□□□□□ -0.38
TRAF4-216ENST00000586813 UBE2WQ96B02 151 aa12.67□□□□□ -0.38
TRAF4-216ENST00000586813 FMC1Q96HJ9 113 aa12.67□□□□□ -0.38
TRAF4-216ENST00000586813 CHCHD7Q9BUK0 85 aa12.67□□□□□ -0.38
TRAF4-216ENST00000586813 FXYD6-FXYD2A0A087WZ82 144 aa12.66□□□□□ -0.38
TRAF4-216ENST00000586813 TRBV10-1A0A0K0K1A3 114 aa12.66□□□□□ -0.38
TRAF4-216ENST00000586813 LINC01559Q495D7 138 aa12.66□□□□□ -0.38
TRAF4-216ENST00000586813 AKR1C8PQ5T2L2 129 aa12.66□□□□□ -0.38
TRAF4-216ENST00000586813 ATRAIDQ6UW56 229 aa12.66□□□□□ -0.38
TRAF4-216ENST00000586813 ZFP82Q8N141 532 aa12.66□□□□□ -0.38
TRAF4-216ENST00000586813 CHAC1Q9BUX1 264 aa12.66□□□□□ -0.38
TRAF4-216ENST00000586813 TMSB15BA0A087X1C1 80 aa12.65□□□□□ -0.38
TRAF4-216ENST00000586813 UBE2D3P61077 147 aa12.65□□□□□ -0.38
TRAF4-216ENST00000586813 UBE2G1P62253 170 aa12.65□□□□□ -0.38
TRAF4-216ENST00000586813 UBE2D2P62837 147 aa12.65□□□□□ -0.38
TRAF4-216ENST00000586813 RPL36AP83881 106 aaKnown RBP12.65□□□□□ -0.38
TRAF4-216ENST00000586813 ELOBQ15370 118 aa12.65□□□□□ -0.38
TRAF4-216ENST00000586813 ZNF674Q2M3X9 581 aa12.65□□□□□ -0.38
TRAF4-216ENST00000586813 KCNIP4Q6PIL6 250 aa12.65□□□□□ -0.38
TRAF4-216ENST00000586813 RPL36ALQ969Q0 106 aaKnown RBP12.65□□□□□ -0.38
TRAF4-216ENST00000586813 LRP1Q07954 4544 aaKnown RBP12.64□□□□□ -0.39
TRAF4-216ENST00000586813 MAP1LC3B2A6NCE7 125 aa12.64□□□□□ -0.39
TRAF4-216ENST00000586813 KRTAP10-4P60372 401 aaPredicted RBP12.64□□□□□ -0.39
TRAF4-216ENST00000586813 RGS21Q2M5E4 152 aa12.64□□□□□ -0.39
TRAF4-216ENST00000586813 MAP1LC3BQ9GZQ8 125 aa12.64□□□□□ -0.39
TRAF4-216ENST00000586813 TRBV7-3A0A075B6L6 115 aa12.63□□□□□ -0.39
TRAF4-216ENST00000586813 TRBV6-1A0A0K0K1D8 114 aa12.63□□□□□ -0.39
TRAF4-216ENST00000586813 LTAP01374 205 aa12.63□□□□□ -0.39
TRAF4-216ENST00000586813 TCEAL7Q9BRU2 100 aa12.63□□□□□ -0.39
TRAF4-216ENST00000586813 Q0VG73 95 aa12.62□□□□□ -0.39
TRAF4-216ENST00000586813 CIRBP-AS1Q8TBR5 109 aa12.62□□□□□ -0.39
TRAF4-216ENST00000586813 OR10G8Q8NGN5 311 aa12.61□□□□□ -0.39
TRAF4-216ENST00000586813 C1orf43Q9BWL3 253 aa12.61□□□□□ -0.39
TRAF4-216ENST00000586813 TRBV6-8A0A0A6YYG3 113 aa12.6□□□□□ -0.39
TRAF4-216ENST00000586813 FHITP49789 147 aa12.6□□□□□ -0.39
TRAF4-216ENST00000586813 C14orf177Q52M58 125 aa12.6□□□□□ -0.39
TRAF4-216ENST00000586813 CST9LP1Q5W188 147 aa12.6□□□□□ -0.39
TRAF4-216ENST00000586813 FAT3Q8TDW7 4589 aa12.6□□□□□ -0.39
TRAF4-216ENST00000586813 TMEM262E9PQX1 116 aa12.59□□□□□ -0.39
TRAF4-216ENST00000586813 AKR1C3P42330 323 aa12.59□□□□□ -0.39
TRAF4-216ENST00000586813 RAB4BP61018 213 aa12.59□□□□□ -0.39
TRAF4-216ENST00000586813 ENHOQ6UWT2 76 aa12.59□□□□□ -0.39
TRAF4-216ENST00000586813 G3V3Q6 166 aa12.58□□□□□ -0.4
TRAF4-216ENST00000586813 IGLV2-8P01709 118 aa12.58□□□□□ -0.4
TRAF4-216ENST00000586813 CRPP02741 224 aa12.58□□□□□ -0.4
TRAF4-216ENST00000586813 ZNF56Q15929 161 aa12.58□□□□□ -0.4
TRAF4-216ENST00000586813 MPV17L2Q567V2 206 aa12.58□□□□□ -0.4
TRAF4-216ENST00000586813 C15orf54Q8N8G6 183 aa12.58□□□□□ -0.4
TRAF4-216ENST00000586813 NEXN-AS1Q8NBZ9 246 aa12.58□□□□□ -0.4
TRAF4-216ENST00000586813 OR10AG1Q8NH19 301 aa12.58□□□□□ -0.4
TRAF4-216ENST00000586813 STOML3Q8TAV4 291 aa12.58□□□□□ -0.4
TRAF4-216ENST00000586813 RPL19P84098 196 aaKnown RBP12.57□□□□□ -0.4
TRAF4-216ENST00000586813 PRR27Q6MZM9 219 aa12.57□□□□□ -0.4
TRAF4-216ENST00000586813 CYTL1Q9NRR1 136 aa12.57□□□□□ -0.4
TRAF4-216ENST00000586813 PKHD1L1Q86WI1 4243 aa12.57□□□□□ -0.4
TRAF4-216ENST00000586813 HMCN2Q8NDA2 5059 aa12.56□□□□□ -0.4
TRAF4-216ENST00000586813 ARPC5O15511 151 aa12.55□□□□□ -0.4
TRAF4-216ENST00000586813 PAGE4O60829 102 aa12.55□□□□□ -0.4
TRAF4-216ENST00000586813 ANGP03950 147 aaKnown RBP12.55□□□□□ -0.4
TRAF4-216ENST00000586813 CXCL1P09341 107 aa12.55□□□□□ -0.4
TRAF4-216ENST00000586813 SERTAD4-AS1Q5TG53 156 aa12.55□□□□□ -0.4
TRAF4-216ENST00000586813 USP17L23D6RBM5 183 aa12.54□□□□□ -0.4
TRAF4-216ENST00000586813 OXTP01178 125 aa12.54□□□□□ -0.4
TRAF4-216ENST00000586813 HLA-DQA1P01909 254 aa12.54□□□□□ -0.4
TRAF4-216ENST00000586813 CHCHD5Q9BSY4 110 aa12.54□□□□□ -0.4
TRAF4-216ENST00000586813 ZNF471Q9BX82 626 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-216ENST00000586813 SNAI2O43623 268 aa12.53□□□□□ -0.4
TRAF4-216ENST00000586813 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
TRAF4-216ENST00000586813 PKIAP61925 76 aa12.53□□□□□ -0.4
TRAF4-216ENST00000586813 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-216ENST00000586813 SCO2A0A1W2PP80 73 aa12.52□□□□□ -0.41
TRAF4-216ENST00000586813 MIAQ16674 131 aa12.52□□□□□ -0.41
TRAF4-216ENST00000586813 MLST8Q9BVC4 326 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms