RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 IGHV3-73A0A0B4J1V6 119 aa13.36□□□□□ -0.27
DDX39A-204ENST00000586558 LCE6AA0A183 80 aa13.36□□□□□ -0.27
DDX39A-204ENST00000586558 CRYGDP07320 174 aa13.36□□□□□ -0.27
DDX39A-204ENST00000586558 P0DMU3 169 aa13.36□□□□□ -0.27
DDX39A-204ENST00000586558 FAM231AP0DMU4 169 aa13.36□□□□□ -0.27
DDX39A-204ENST00000586558 FAM231CP0DMU5 169 aa13.36□□□□□ -0.27
DDX39A-204ENST00000586558 FAM74A4Q5TZK3 123 aa13.36□□□□□ -0.27
DDX39A-204ENST00000586558 LINC00476Q8WZB0 136 aa13.36□□□□□ -0.27
DDX39A-204ENST00000586558 SAMD10Q9BYL1 202 aa13.36□□□□□ -0.27
DDX39A-204ENST00000586558 A0A087WWL8 130 aa13.35□□□□□ -0.27
DDX39A-204ENST00000586558 F8W036 122 aa13.35□□□□□ -0.27
DDX39A-204ENST00000586558 TRGC1P0CF51 173 aa13.35□□□□□ -0.27
DDX39A-204ENST00000586558 RHOHQ15669 191 aa13.35□□□□□ -0.27
DDX39A-204ENST00000586558 SLC25A29Q8N8R3 303 aa13.35□□□□□ -0.27
DDX39A-204ENST00000586558 PRADC1Q9BSG0 188 aa13.35□□□□□ -0.27
DDX39A-204ENST00000586558 SEC11CQ9BY50 192 aa13.35□□□□□ -0.27
DDX39A-204ENST00000586558 HIGD1CA8MV81 97 aa13.34□□□□□ -0.27
DDX39A-204ENST00000586558 PPP1R2P9O14990 202 aa13.34□□□□□ -0.27
DDX39A-204ENST00000586558 SMIM17P0DL12 118 aa13.34□□□□□ -0.27
DDX39A-204ENST00000586558 NTF3P20783 257 aa13.34□□□□□ -0.27
DDX39A-204ENST00000586558 SSTP61278 116 aa13.34□□□□□ -0.27
DDX39A-204ENST00000586558 MRPL23Q16540 153 aaKnown RBP13.34□□□□□ -0.27
DDX39A-204ENST00000586558 BORCS7Q96B45 105 aa13.34□□□□□ -0.27
DDX39A-204ENST00000586558 A0A096LPF7 62 aa13.33□□□□□ -0.28
DDX39A-204ENST00000586558 GYPEP15421 78 aa13.33□□□□□ -0.28
DDX39A-204ENST00000586558 ADCYAP1P18509 176 aa13.33□□□□□ -0.28
DDX39A-204ENST00000586558 PGLYRP4Q96LB8 373 aa13.33□□□□□ -0.28
DDX39A-204ENST00000586558 NACAE9PAV3 2078 aa13.33□□□□□ -0.28
DDX39A-204ENST00000586558 K7EQD1 137 aa13.32□□□□□ -0.28
DDX39A-204ENST00000586558 MT-ND4LP03901 98 aa13.32□□□□□ -0.28
DDX39A-204ENST00000586558 TWIST1Q15672 202 aa13.32□□□□□ -0.28
DDX39A-204ENST00000586558 RNF212Q495C1 297 aa13.32□□□□□ -0.28
DDX39A-204ENST00000586558 SH2D6Q7Z4S9 175 aa13.32□□□□□ -0.28
DDX39A-204ENST00000586558 C14orf178Q8N769 122 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-204ENST00000586558 MSRB1Q9NZV6 116 aa13.32□□□□□ -0.28
DDX39A-204ENST00000586558 NAT8BQ9UHF3 227 aa13.32□□□□□ -0.28
DDX39A-204ENST00000586558 KIF25-AS1Q9Y6Z4 181 aa13.32□□□□□ -0.28
DDX39A-204ENST00000586558 A0A1B0GUT8 65 aa13.31□□□□□ -0.28
DDX39A-204ENST00000586558 SMIM27A0A1W2PRY6 76 aa13.31□□□□□ -0.28
DDX39A-204ENST00000586558 LY6G6CO95867 125 aa13.31□□□□□ -0.28
DDX39A-204ENST00000586558 SRIP30626 198 aa13.31□□□□□ -0.28
DDX39A-204ENST00000586558 RAB4BP61018 213 aa13.31□□□□□ -0.28
DDX39A-204ENST00000586558 Q6ZSN1 163 aa13.31□□□□□ -0.28
DDX39A-204ENST00000586558 CCL18P55774 89 aa13.3□□□□□ -0.28
DDX39A-204ENST00000586558 FAM3BP58499 235 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-204ENST00000586558 ZNF56Q15929 161 aa13.3□□□□□ -0.28
DDX39A-204ENST00000586558 SMIM15Q7Z3B0 74 aa13.3□□□□□ -0.28
DDX39A-204ENST00000586558 ANAPC16Q96DE5 110 aa13.3□□□□□ -0.28
DDX39A-204ENST00000586558 RYR3Q15413 4870 aa13.29□□□□□ -0.28
DDX39A-204ENST00000586558 C10orf91Q5T1B1 145 aa13.29□□□□□ -0.28
DDX39A-204ENST00000586558 NEGR1Q7Z3B1 354 aa13.29□□□□□ -0.28
DDX39A-204ENST00000586558 UBE2DNLQ8IWF7 75 aa13.29□□□□□ -0.28
DDX39A-204ENST00000586558 NUP35Q8NFH5 326 aa13.29□□□□□ -0.28
DDX39A-204ENST00000586558 DPH3P1Q9H4G8 78 aa13.29□□□□□ -0.28
DDX39A-204ENST00000586558 CARHSP1Q9Y2V2 147 aaKnown RBP13.29□□□□□ -0.28
DDX39A-204ENST00000586558 PLECQ15149 4684 aaKnown RBP13.28□□□□□ -0.28
DDX39A-204ENST00000586558 TRBV10-1A0A0K0K1A3 114 aa13.28□□□□□ -0.28
DDX39A-204ENST00000586558 EVI2AP22794 236 aa13.28□□□□□ -0.28
DDX39A-204ENST00000586558 LINC00315P59091 139 aa13.28□□□□□ -0.28
DDX39A-204ENST00000586558 LOC100131303A0A0U1RQF7 123 aa13.27□□□□□ -0.29
DDX39A-204ENST00000586558 F5H697 171 aa13.27□□□□□ -0.29
DDX39A-204ENST00000586558 RIGQ13278 110 aa13.27□□□□□ -0.29
DDX39A-204ENST00000586558 ALMS1Q8TCU4 4167 aa13.27□□□□□ -0.29
DDX39A-204ENST00000586558 A0A1B0GW15 77 aa13.25□□□□□ -0.29
DDX39A-204ENST00000586558 H7C1H1 209 aa13.25□□□□□ -0.29
DDX39A-204ENST00000586558 MGPP08493 103 aa13.25□□□□□ -0.29
DDX39A-204ENST00000586558 TIRAPP58753 221 aa13.25□□□□□ -0.29
DDX39A-204ENST00000586558 ESRGQ1W209 222 aa13.25□□□□□ -0.29
DDX39A-204ENST00000586558 LINC00694P0DN24 101 aa13.24□□□□□ -0.29
DDX39A-204ENST00000586558 CTDSP1Q9GZU7 261 aa13.24□□□□□ -0.29
DDX39A-204ENST00000586558 MRPS16Q9Y3D3 137 aaKnown RBP13.24□□□□□ -0.29
DDX39A-204ENST00000586558 LINC00588Q9Y4M8 146 aa13.24□□□□□ -0.29
DDX39A-204ENST00000586558 RPL36AP83881 106 aaKnown RBP13.23□□□□□ -0.29
DDX39A-204ENST00000586558 NDUFA5Q16718 116 aa13.23□□□□□ -0.29
DDX39A-204ENST00000586558 RPL36ALQ969Q0 106 aaKnown RBP13.23□□□□□ -0.29
DDX39A-204ENST00000586558 TMEM191AQ9H0A3 160 aa13.23□□□□□ -0.29
DDX39A-204ENST00000586558 GAGE12JA6NER3 117 aa13.22□□□□□ -0.29
DDX39A-204ENST00000586558 GAGE1Q13065 139 aa13.22□□□□□ -0.29
DDX39A-204ENST00000586558 GAGE4Q13068 117 aa13.22□□□□□ -0.29
DDX39A-204ENST00000586558 GAGE5Q13069 117 aa13.22□□□□□ -0.29
DDX39A-204ENST00000586558 GAGE13Q4V321 117 aa13.22□□□□□ -0.29
DDX39A-204ENST00000586558 SUMO4Q6EEV6 95 aa13.22□□□□□ -0.29
DDX39A-204ENST00000586558 LYPD5Q6UWN5 251 aa13.22□□□□□ -0.29
DDX39A-204ENST00000586558 ATP6V0E2Q8NHE4 81 aa13.22□□□□□ -0.29
DDX39A-204ENST00000586558 UPK3BQ9BT76 320 aa13.22□□□□□ -0.29
DDX39A-204ENST00000586558 TRBV7-3A0A075B6L6 115 aa13.21□□□□□ -0.29
DDX39A-204ENST00000586558 M0QY20 66 aa13.21□□□□□ -0.29
DDX39A-204ENST00000586558 S100A8P05109 93 aa13.21□□□□□ -0.29
DDX39A-204ENST00000586558 RHEBQ15382 184 aa13.21□□□□□ -0.29
DDX39A-204ENST00000586558 ATP5L2Q7Z4Y8 100 aa13.21□□□□□ -0.29
DDX39A-204ENST00000586558 FRZBQ92765 325 aa13.21□□□□□ -0.29
DDX39A-204ENST00000586558 IMMP2LQ96T52 175 aa13.21□□□□□ -0.29
DDX39A-204ENST00000586558 Q9UF83 564 aa13.21□□□□□ -0.29
DDX39A-204ENST00000586558 LYSTQ99698 3801 aa13.2□□□□□ -0.3
DDX39A-204ENST00000586558 RASL11AQ6T310 242 aa13.2□□□□□ -0.3
DDX39A-204ENST00000586558 NEXN-AS1Q8NBZ9 246 aa13.2□□□□□ -0.3
DDX39A-204ENST00000586558 ZNRF2Q8NHG8 242 aa13.2□□□□□ -0.3
DDX39A-204ENST00000586558 GTSF1LQ9H1H1 148 aa13.2□□□□□ -0.3
DDX39A-204ENST00000586558 A0A087WWC5 75 aa13.19□□□□□ -0.3
DDX39A-204ENST00000586558 UBE2D3P61077 147 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms