RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 GCGP01275 180 aa7.78□□□□□ -1.16
LIG3-207ENST00000586119 PFN1P07737 140 aaKnown RBP7.78□□□□□ -1.16
LIG3-207ENST00000586119 SRP19P09132 144 aaKnown RBP7.78□□□□□ -1.16
LIG3-207ENST00000586119 GNG4P50150 75 aa7.78□□□□□ -1.16
LIG3-207ENST00000586119 FAM74A3Q4VXF1 159 aa7.78□□□□□ -1.16
LIG3-207ENST00000586119 C10orf91Q5T1B1 145 aa7.78□□□□□ -1.16
LIG3-207ENST00000586119 DERL1Q9BUN8 251 aa7.78□□□□□ -1.16
LIG3-207ENST00000586119 NAGKQ9UJ70 344 aa7.78□□□□□ -1.16
LIG3-207ENST00000586119 IGLV5-52A0A0A0MRZ9 124 aa7.77□□□□□ -1.17
LIG3-207ENST00000586119 TDRG1Q3Y452 100 aa7.77□□□□□ -1.17
LIG3-207ENST00000586119 CENPWQ5EE01 88 aa7.77□□□□□ -1.17
LIG3-207ENST00000586119 FAM162BQ5T6X4 162 aa7.77□□□□□ -1.17
LIG3-207ENST00000586119 FAM159AQ6UWV7 190 aa7.77□□□□□ -1.17
LIG3-207ENST00000586119 OR4C5Q8NGB2 326 aa7.77□□□□□ -1.17
LIG3-207ENST00000586119 KCNS1Q96KK3 526 aa7.77□□□□□ -1.17
LIG3-207ENST00000586119 PARLQ9H300 379 aa7.77□□□□□ -1.17
LIG3-207ENST00000586119 CARHSP1Q9Y2V2 147 aaKnown RBP7.77□□□□□ -1.17
LIG3-207ENST00000586119 TRGV11A0A075B6L2 103 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 TRAV4A0A0B4J268 109 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 TMEM218A2RU14 115 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 IGHV3-30P01768 117 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 IGHV3-33P01772 117 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 APOC3P02656 99 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 ORM1P02763 201 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 IGHV3-30-3P0DP02 117 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 IGHV3-30-5P0DP03 117 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 ZNF80P51504 273 aaPredicted RBP7.76□□□□□ -1.17
LIG3-207ENST00000586119 WFDC2Q14508 124 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 ZNF674Q2M3X9 581 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 ZC2HC1AQ96GY0 325 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 SPXQ9BT56 116 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 Q9HAA7 133 aa7.76□□□□□ -1.17
LIG3-207ENST00000586119 IGHV3-38A0A0C4DH36 116 aa7.75□□□□□ -1.17
LIG3-207ENST00000586119 PSCAO43653 123 aa7.75□□□□□ -1.17
LIG3-207ENST00000586119 SNAPINO95295 136 aa7.75□□□□□ -1.17
LIG3-207ENST00000586119 TYMSP04818 313 aa7.75□□□□□ -1.17
LIG3-207ENST00000586119 Q8N3U1 123 aa7.75□□□□□ -1.17
LIG3-207ENST00000586119 Q8N814 137 aa7.75□□□□□ -1.17
LIG3-207ENST00000586119 NHLRC2Q8NBF2 726 aa7.75□□□□□ -1.17
LIG3-207ENST00000586119 SMIM7Q9BQ49 75 aa7.75□□□□□ -1.17
LIG3-207ENST00000586119 SEC11CQ9BY50 192 aa7.75□□□□□ -1.17
LIG3-207ENST00000586119 SDF2L1Q9HCN8 221 aa7.75□□□□□ -1.17
LIG3-207ENST00000586119 TRBV20OR9-2A0A075B6H5 130 aa7.74□□□□□ -1.17
LIG3-207ENST00000586119 IGHV3-73A0A0B4J1V6 119 aa7.74□□□□□ -1.17
LIG3-207ENST00000586119 ZNF727A8MUV8 499 aa7.74□□□□□ -1.17
LIG3-207ENST00000586119 IBA57-AS1B1ANH7 110 aa7.74□□□□□ -1.17
LIG3-207ENST00000586119 M0R2P5 195 aa7.74□□□□□ -1.17
LIG3-207ENST00000586119 SH2D1AO60880 128 aa7.74□□□□□ -1.17
LIG3-207ENST00000586119 IGLV2-8P01709 118 aa7.74□□□□□ -1.17
LIG3-207ENST00000586119 GATA1P15976 413 aaPredicted RBP7.74□□□□□ -1.17
LIG3-207ENST00000586119 CRIP1P50238 77 aa7.74□□□□□ -1.17
LIG3-207ENST00000586119 CEBPGP53567 150 aa7.74□□□□□ -1.17
LIG3-207ENST00000586119 SRSF3P84103 164 aaKnown RBP7.74□□□□□ -1.17
LIG3-207ENST00000586119 Q6ZSN1 163 aa7.74□□□□□ -1.17
LIG3-207ENST00000586119 C9JQL5 133 aa7.73□□□□□ -1.17
LIG3-207ENST00000586119 K7EP13 123 aa7.73□□□□□ -1.17
LIG3-207ENST00000586119 MGST1P10620 155 aaKnown RBP7.73□□□□□ -1.17
LIG3-207ENST00000586119 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
LIG3-207ENST00000586119 LINC01556Q5JQF7 62 aa7.73□□□□□ -1.17
LIG3-207ENST00000586119 C10orf126Q8N4M7 172 aa7.73□□□□□ -1.17
LIG3-207ENST00000586119 SLC25A29Q8N8R3 303 aa7.73□□□□□ -1.17
LIG3-207ENST00000586119 DAZAP1Q96EP5 407 aaKnown RBP7.73□□□□□ -1.17
LIG3-207ENST00000586119 TMEM70Q9BUB7 260 aa7.73□□□□□ -1.17
LIG3-207ENST00000586119 C11orf21Q9P2W6 132 aa7.73□□□□□ -1.17
LIG3-207ENST00000586119 IGKV3D-20A0A0C4DH25 116 aa7.72□□□□□ -1.17
LIG3-207ENST00000586119 C19orf71A6NCJ1 209 aa7.72□□□□□ -1.17
LIG3-207ENST00000586119 J3QL48 77 aa7.72□□□□□ -1.17
LIG3-207ENST00000586119 CXCL1P09341 107 aa7.72□□□□□ -1.17
LIG3-207ENST00000586119 TMEM241Q24JQ0 296 aa7.72□□□□□ -1.17
LIG3-207ENST00000586119 OR10J3Q5JRS4 329 aa7.72□□□□□ -1.17
LIG3-207ENST00000586119 DNLZQ5SXM8 178 aa7.72□□□□□ -1.17
LIG3-207ENST00000586119 OCC1Q8TAD7 63 aa7.72□□□□□ -1.17
LIG3-207ENST00000586119 NAT8Q9UHE5 227 aa7.72□□□□□ -1.17
LIG3-207ENST00000586119 LRP1Q07954 4544 aaKnown RBP7.71□□□□□ -1.17
LIG3-207ENST00000586119 B4DEV8 164 aa7.71□□□□□ -1.18
LIG3-207ENST00000586119 LECT2O14960 151 aa7.71□□□□□ -1.18
LIG3-207ENST00000586119 TIRAPP58753 221 aa7.71□□□□□ -1.18
LIG3-207ENST00000586119 RPS20P60866 119 aaKnown RBP7.71□□□□□ -1.18
LIG3-207ENST00000586119 LINC01620Q4KN68 170 aa7.71□□□□□ -1.18
LIG3-207ENST00000586119 PRR27Q6MZM9 219 aa7.71□□□□□ -1.18
LIG3-207ENST00000586119 LINC01551Q86U37 167 aa7.71□□□□□ -1.18
LIG3-207ENST00000586119 Q9UF83 564 aa7.71□□□□□ -1.18
LIG3-207ENST00000586119 XKRY2A2RUG3 117 aa7.7□□□□□ -1.18
LIG3-207ENST00000586119 PGPEP1LA6NFU8 196 aa7.7□□□□□ -1.18
LIG3-207ENST00000586119 F8W036 122 aa7.7□□□□□ -1.18
LIG3-207ENST00000586119 RS1O15537 224 aa7.7□□□□□ -1.18
LIG3-207ENST00000586119 P01737 135 aa7.7□□□□□ -1.18
LIG3-207ENST00000586119 ASIPP42127 132 aa7.7□□□□□ -1.18
LIG3-207ENST00000586119 CFAP126Q5VTH2 177 aa7.7□□□□□ -1.18
LIG3-207ENST00000586119 ATRAIDQ6UW56 229 aa7.7□□□□□ -1.18
LIG3-207ENST00000586119 FAM231DQ6ZW35 169 aa7.7□□□□□ -1.18
LIG3-207ENST00000586119 NTN5Q8WTR8 489 aaPredicted RBP7.7□□□□□ -1.18
LIG3-207ENST00000586119 PTH2Q96A98 100 aa7.7□□□□□ -1.18
LIG3-207ENST00000586119 TRAV8-6A0A0B4J262 113 aa7.69□□□□□ -1.18
LIG3-207ENST00000586119 K7EN84 100 aa7.69□□□□□ -1.18
LIG3-207ENST00000586119 S100A4P26447 101 aaKnown RBP7.69□□□□□ -1.18
LIG3-207ENST00000586119 S100A12P80511 92 aa7.69□□□□□ -1.18
LIG3-207ENST00000586119 PNRC1Q12796 327 aaPredicted RBP7.69□□□□□ -1.18
LIG3-207ENST00000586119 ZNF876PQ49A33 203 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms