RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 A0A087WWC5 75 aa13.58□□□□□ -0.24
TOP3A-219ENST00000584887 TRAV8-3A0A0A6YYJ7 113 aa13.58□□□□□ -0.24
TOP3A-219ENST00000584887 M0R381 172 aa13.58□□□□□ -0.24
TOP3A-219ENST00000584887 TPT1P13693 172 aaKnown RBP13.58□□□□□ -0.24
TOP3A-219ENST00000584887 TOR2AQ5JU69 321 aa13.58□□□□□ -0.24
TOP3A-219ENST00000584887 STOML3Q8TAV4 291 aa13.58□□□□□ -0.24
TOP3A-219ENST00000584887 URGCP-MRPS24S4R325 110 aa13.58□□□□□ -0.24
TOP3A-219ENST00000584887 G3V3Q6 166 aa13.57□□□□□ -0.24
TOP3A-219ENST00000584887 AKR1C3P42330 323 aa13.57□□□□□ -0.24
TOP3A-219ENST00000584887 DNLZQ5SXM8 178 aa13.56□□□□□ -0.24
TOP3A-219ENST00000584887 CYTL1Q9NRR1 136 aa13.56□□□□□ -0.24
TOP3A-219ENST00000584887 FAM30AQ9NZY2 134 aa13.56□□□□□ -0.24
TOP3A-219ENST00000584887 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-219ENST00000584887 SMLR1H3BR10 107 aa13.55□□□□□ -0.24
TOP3A-219ENST00000584887 FHITP49789 147 aa13.55□□□□□ -0.24
TOP3A-219ENST00000584887 LTAP01374 205 aa13.54□□□□□ -0.24
TOP3A-219ENST00000584887 ZNF674Q2M3X9 581 aa13.54□□□□□ -0.24
TOP3A-219ENST00000584887 RGS21Q2M5E4 152 aa13.54□□□□□ -0.24
TOP3A-219ENST00000584887 LINC01559Q495D7 138 aa13.54□□□□□ -0.24
TOP3A-219ENST00000584887 COX8CQ7Z4L0 72 aa13.54□□□□□ -0.24
TOP3A-219ENST00000584887 ZFP82Q8N141 532 aa13.54□□□□□ -0.24
TOP3A-219ENST00000584887 SFRP2Q96HF1 295 aa13.54□□□□□ -0.24
TOP3A-219ENST00000584887 A0A1B0GV50 99 aa13.53□□□□□ -0.24
TOP3A-219ENST00000584887 PAGE4O60829 102 aa13.53□□□□□ -0.24
TOP3A-219ENST00000584887 BAALCQ8WXS3 180 aa13.53□□□□□ -0.24
TOP3A-219ENST00000584887 RMI2Q96E14 147 aa13.53□□□□□ -0.24
TOP3A-219ENST00000584887 TCEAL7Q9BRU2 100 aa13.53□□□□□ -0.24
TOP3A-219ENST00000584887 FAT1Q14517 4588 aa13.52□□□□□ -0.24
TOP3A-219ENST00000584887 TRBV6-1A0A0K0K1D8 114 aa13.52□□□□□ -0.25
TOP3A-219ENST00000584887 KLK12Q9UKR0 248 aa13.52□□□□□ -0.25
TOP3A-219ENST00000584887 IGKV2D-24A0A075B6R9 120 aa13.51□□□□□ -0.25
TOP3A-219ENST00000584887 RPL36AP83881 106 aaKnown RBP13.51□□□□□ -0.25
TOP3A-219ENST00000584887 KCNIP4Q6PIL6 250 aa13.51□□□□□ -0.25
TOP3A-219ENST00000584887 NIT1Q86X76 327 aa13.51□□□□□ -0.25
TOP3A-219ENST00000584887 FAM213BQ8TBF2 198 aa13.51□□□□□ -0.25
TOP3A-219ENST00000584887 SFT2D1Q8WV19 159 aa13.51□□□□□ -0.25
TOP3A-219ENST00000584887 RPL36ALQ969Q0 106 aaKnown RBP13.51□□□□□ -0.25
TOP3A-219ENST00000584887 DNAJC30Q96LL9 226 aa13.51□□□□□ -0.25
TOP3A-219ENST00000584887 A0A087WX48 190 aa13.5□□□□□ -0.25
TOP3A-219ENST00000584887 SEC11BP0C7V7 166 aa13.5□□□□□ -0.25
TOP3A-219ENST00000584887 COX11Q9Y6N1 276 aa13.5□□□□□ -0.25
TOP3A-219ENST00000584887 RPL19P84098 196 aaKnown RBP13.49□□□□□ -0.25
TOP3A-219ENST00000584887 UBE2WQ96B02 151 aa13.49□□□□□ -0.25
TOP3A-219ENST00000584887 SRRM2Q9UQ35 2752 aaKnown RBP13.48□□□□□ -0.25
TOP3A-219ENST00000584887 TRBV10-1A0A0K0K1A3 114 aa13.48□□□□□ -0.25
TOP3A-219ENST00000584887 SCO2A0A1W2PP80 73 aa13.48□□□□□ -0.25
TOP3A-219ENST00000584887 PFDN1O60925 122 aa13.48□□□□□ -0.25
TOP3A-219ENST00000584887 C1QBP02746 253 aa13.48□□□□□ -0.25
TOP3A-219ENST00000584887 ZNF56Q15929 161 aa13.48□□□□□ -0.25
TOP3A-219ENST00000584887 LINC01620Q4KN68 170 aa13.48□□□□□ -0.25
TOP3A-219ENST00000584887 RBFOX3A6NFN3 312 aa13.47□□□□□ -0.25
TOP3A-219ENST00000584887 UBE2D3P61077 147 aa13.47□□□□□ -0.25
TOP3A-219ENST00000584887 UBE2D2P62837 147 aa13.47□□□□□ -0.25
TOP3A-219ENST00000584887 KCNRGQ8N5I3 272 aa13.47□□□□□ -0.25
TOP3A-219ENST00000584887 OR10AG1Q8NH19 301 aa13.47□□□□□ -0.25
TOP3A-219ENST00000584887 TRBV7-3A0A075B6L6 115 aa13.46□□□□□ -0.25
TOP3A-219ENST00000584887 MUC21A0A0G2JKD1 596 aa13.46□□□□□ -0.25
TOP3A-219ENST00000584887 MUC21A0A140T8X8 626 aa13.46□□□□□ -0.25
TOP3A-219ENST00000584887 S100A9P06702 114 aaKnown RBP13.46□□□□□ -0.25
TOP3A-219ENST00000584887 ELOBQ15370 118 aa13.46□□□□□ -0.25
TOP3A-219ENST00000584887 BAGE2Q86Y30 109 aa13.46□□□□□ -0.25
TOP3A-219ENST00000584887 ZNF471Q9BX82 626 aaPredicted RBP13.46□□□□□ -0.25
TOP3A-219ENST00000584887 TMEM262E9PQX1 116 aa13.45□□□□□ -0.26
TOP3A-219ENST00000584887 SSTP61278 116 aa13.45□□□□□ -0.26
TOP3A-219ENST00000584887 ZNF345Q14585 488 aa13.45□□□□□ -0.26
TOP3A-219ENST00000584887 PRR27Q6MZM9 219 aa13.45□□□□□ -0.26
TOP3A-219ENST00000584887 Q8N976 141 aa13.45□□□□□ -0.26
TOP3A-219ENST00000584887 UMAD1C9J7I0 102 aa13.44□□□□□ -0.26
TOP3A-219ENST00000584887 Q6ZSA8 131 aa13.44□□□□□ -0.26
TOP3A-219ENST00000584887 LINC00528Q8N1L1 170 aa13.44□□□□□ -0.26
TOP3A-219ENST00000584887 MBD3L1Q8WWY6 194 aa13.44□□□□□ -0.26
TOP3A-219ENST00000584887 CHCHD7Q9BUK0 85 aa13.44□□□□□ -0.26
TOP3A-219ENST00000584887 VPS13BQ7Z7G8 4022 aa13.43□□□□□ -0.26
TOP3A-219ENST00000584887 KANTRA0A1W2PQU2 76 aa13.43□□□□□ -0.26
TOP3A-219ENST00000584887 PLA2G1BP04054 148 aaKnown RBP13.43□□□□□ -0.26
TOP3A-219ENST00000584887 RAB4BP61018 213 aa13.43□□□□□ -0.26
TOP3A-219ENST00000584887 SPANXN1Q5VSR9 72 aa13.43□□□□□ -0.26
TOP3A-219ENST00000584887 HERC1Q15751 4861 aa13.43□□□□□ -0.26
TOP3A-219ENST00000584887 F5H697 171 aa13.42□□□□□ -0.26
TOP3A-219ENST00000584887 C15orf54Q8N8G6 183 aa13.42□□□□□ -0.26
TOP3A-219ENST00000584887 NEXN-AS1Q8NBZ9 246 aa13.42□□□□□ -0.26
TOP3A-219ENST00000584887 TRBV6-8A0A0A6YYG3 113 aa13.41□□□□□ -0.26
TOP3A-219ENST00000584887 BCL2L11O43521 198 aa13.41□□□□□ -0.26
TOP3A-219ENST00000584887 CRPP02741 224 aa13.41□□□□□ -0.26
TOP3A-219ENST00000584887 CXCL1P09341 107 aa13.41□□□□□ -0.26
TOP3A-219ENST00000584887 H2AFB1P0C5Y9 115 aa13.41□□□□□ -0.26
TOP3A-219ENST00000584887 OR10G8Q8NGN5 311 aa13.41□□□□□ -0.26
TOP3A-219ENST00000584887 A0A0D9SG52 128 aa13.4□□□□□ -0.26
TOP3A-219ENST00000584887 J3QL48 77 aa13.4□□□□□ -0.26
TOP3A-219ENST00000584887 Q0VG73 95 aa13.4□□□□□ -0.26
TOP3A-219ENST00000584887 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.4□□□□□ -0.26
TOP3A-219ENST00000584887 CHCHD5Q9BSY4 110 aa13.4□□□□□ -0.26
TOP3A-219ENST00000584887 C1orf43Q9BWL3 253 aa13.4□□□□□ -0.26
TOP3A-219ENST00000584887 SNAI2O43623 268 aa13.39□□□□□ -0.27
TOP3A-219ENST00000584887 MPV17L2Q567V2 206 aa13.39□□□□□ -0.27
TOP3A-219ENST00000584887 TMUB2Q71RG4 321 aa13.39□□□□□ -0.27
TOP3A-219ENST00000584887 SCXQ7RTU7 201 aa13.39□□□□□ -0.27
TOP3A-219ENST00000584887 MLST8Q9BVC4 326 aa13.39□□□□□ -0.27
TOP3A-219ENST00000584887 HMSDA8MTL9 139 aa13.38□□□□□ -0.27
TOP3A-219ENST00000584887 ANGP03950 147 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms