RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 PLAC8L1A1L4L8 177 aa10.09□□□□□ -0.79
UBBP4-202ENST00000584755 CRYGDP07320 174 aa10.09□□□□□ -0.79
UBBP4-202ENST00000584755 IQCJQ1A5X6 159 aa10.09□□□□□ -0.79
UBBP4-202ENST00000584755 MRAP2Q96G30 205 aa10.09□□□□□ -0.79
UBBP4-202ENST00000584755 C16orf74Q96GX8 76 aa10.09□□□□□ -0.79
UBBP4-202ENST00000584755 JPT2Q9H910 190 aa10.09□□□□□ -0.79
UBBP4-202ENST00000584755 IFITM10A6NMD0 228 aa10.08□□□□□ -0.8
UBBP4-202ENST00000584755 SMKR1H3BMG3 65 aa10.08□□□□□ -0.8
UBBP4-202ENST00000584755 NUPR1O60356 82 aa10.08□□□□□ -0.8
UBBP4-202ENST00000584755 SERF1AO75920 110 aa10.08□□□□□ -0.8
UBBP4-202ENST00000584755 DAZ2Q13117 558 aaKnown RBP10.08□□□□□ -0.8
UBBP4-202ENST00000584755 LINC00518Q8N0U6 118 aa10.08□□□□□ -0.8
UBBP4-202ENST00000584755 RASL10AQ92737 203 aa10.08□□□□□ -0.8
UBBP4-202ENST00000584755 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
UBBP4-202ENST00000584755 NCR2O95944 276 aa10.07□□□□□ -0.8
UBBP4-202ENST00000584755 NPYP01303 97 aa10.07□□□□□ -0.8
UBBP4-202ENST00000584755 SMIM17P0DL12 118 aa10.07□□□□□ -0.8
UBBP4-202ENST00000584755 RRN3P1Q2M238 152 aa10.07□□□□□ -0.8
UBBP4-202ENST00000584755 NRACQ8N912 160 aa10.07□□□□□ -0.8
UBBP4-202ENST00000584755 URB1-AS1Q96HZ7 61 aa10.07□□□□□ -0.8
UBBP4-202ENST00000584755 SMIM9A6NGZ8 99 aa10.06□□□□□ -0.8
UBBP4-202ENST00000584755 A8MWV9 139 aa10.06□□□□□ -0.8
UBBP4-202ENST00000584755 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
UBBP4-202ENST00000584755 UFSP1Q6NVU6 142 aa10.06□□□□□ -0.8
UBBP4-202ENST00000584755 OVOL2Q9BRP0 275 aa10.06□□□□□ -0.8
UBBP4-202ENST00000584755 SAMD10Q9BYL1 202 aa10.06□□□□□ -0.8
UBBP4-202ENST00000584755 X6R8D5 127 aa10.06□□□□□ -0.8
UBBP4-202ENST00000584755 A0A087WWL8 130 aa10.05□□□□□ -0.8
UBBP4-202ENST00000584755 PRSS47A8MTI9 375 aa10.05□□□□□ -0.8
UBBP4-202ENST00000584755 TNFRSF6BO95407 300 aa10.05□□□□□ -0.8
UBBP4-202ENST00000584755 GATA1P15976 413 aaPredicted RBP10.05□□□□□ -0.8
UBBP4-202ENST00000584755 NIT1Q86X76 327 aa10.05□□□□□ -0.8
UBBP4-202ENST00000584755 TRAV26-2A0A0B4J265 109 aa10.04□□□□□ -0.8
UBBP4-202ENST00000584755 RS1O15537 224 aa10.04□□□□□ -0.8
UBBP4-202ENST00000584755 MGPP08493 103 aa10.04□□□□□ -0.8
UBBP4-202ENST00000584755 PDZD11Q5EBL8 140 aa10.04□□□□□ -0.8
UBBP4-202ENST00000584755 KPRPQ5T749 579 aaPredicted RBP10.04□□□□□ -0.8
UBBP4-202ENST00000584755 CFAP126Q5VTH2 177 aa10.04□□□□□ -0.8
UBBP4-202ENST00000584755 Q6ZWC4 215 aa10.04□□□□□ -0.8
UBBP4-202ENST00000584755 CHCHD1Q96BP2 118 aaKnown RBP10.04□□□□□ -0.8
UBBP4-202ENST00000584755 PACRGQ96M98 296 aaPredicted RBP10.04□□□□□ -0.8
UBBP4-202ENST00000584755 HIST1H2BLQ99880 126 aa10.04□□□□□ -0.8
UBBP4-202ENST00000584755 EDA2RQ9HAV5 297 aa10.04□□□□□ -0.8
UBBP4-202ENST00000584755 MRPL16Q9NX20 251 aaKnown RBP10.04□□□□□ -0.8
UBBP4-202ENST00000584755 RIPPLY3P57055 190 aa10.04□□□□□ -0.8
UBBP4-202ENST00000584755 SUMO4Q6EEV6 95 aa10.04□□□□□ -0.8
UBBP4-202ENST00000584755 LINC01546A6NGU7 62 aa10.03□□□□□ -0.8
UBBP4-202ENST00000584755 PPP1R17O96001 155 aa10.03□□□□□ -0.8
UBBP4-202ENST00000584755 LINC00614P0C842 121 aa10.03□□□□□ -0.8
UBBP4-202ENST00000584755 S100A2P29034 98 aa10.03□□□□□ -0.8
UBBP4-202ENST00000584755 DEFB135Q30KP9 77 aa10.03□□□□□ -0.8
UBBP4-202ENST00000584755 FAM74A4Q5TZK3 123 aa10.03□□□□□ -0.8
UBBP4-202ENST00000584755 RNF183Q96D59 192 aa10.03□□□□□ -0.8
UBBP4-202ENST00000584755 MAP1LC3AQ9H492 121 aa10.03□□□□□ -0.8
UBBP4-202ENST00000584755 NOP10Q9NPE3 64 aaKnown RBP10.03□□□□□ -0.8
UBBP4-202ENST00000584755 IGLV2-18A0A075B6J9 118 aa10.02□□□□□ -0.81
UBBP4-202ENST00000584755 TRGV1A0A0A0MS02 117 aa10.02□□□□□ -0.81
UBBP4-202ENST00000584755 RHODO00212 210 aa10.02□□□□□ -0.81
UBBP4-202ENST00000584755 IFI27P40305 119 aaPredicted RBP10.02□□□□□ -0.81
UBBP4-202ENST00000584755 ZFP2Q6ZN57 461 aa10.02□□□□□ -0.81
UBBP4-202ENST00000584755 Q6ZTI0 123 aa10.02□□□□□ -0.81
UBBP4-202ENST00000584755 TMEM18Q96B42 140 aa10.02□□□□□ -0.81
UBBP4-202ENST00000584755 C20orf78Q9BR46 151 aa10.02□□□□□ -0.81
UBBP4-202ENST00000584755 NACAE9PAV3 2078 aa10.02□□□□□ -0.81
UBBP4-202ENST00000584755 M0QY20 66 aa10.01□□□□□ -0.81
UBBP4-202ENST00000584755 RNASEKQ6P5S7 137 aaKnown RBP10.01□□□□□ -0.81
UBBP4-202ENST00000584755 LINC00612Q8N6U2 182 aa10.01□□□□□ -0.81
UBBP4-202ENST00000584755 PRSS3P2Q8NHM4 247 aa10.01□□□□□ -0.81
UBBP4-202ENST00000584755 NBEAL1Q6ZS30 2694 aa10.01□□□□□ -0.81
UBBP4-202ENST00000584755 TRBV6-5A0A0K0K1A5 114 aa10□□□□□ -0.81
UBBP4-202ENST00000584755 LOC389332A0A1B0GUA5 103 aa10□□□□□ -0.81
UBBP4-202ENST00000584755 HSBP1O75506 76 aa10□□□□□ -0.81
UBBP4-202ENST00000584755 FABP4P15090 132 aa10□□□□□ -0.81
UBBP4-202ENST00000584755 RPL32P62910 135 aaKnown RBP10□□□□□ -0.81
UBBP4-202ENST00000584755 ZNF56Q15929 161 aa10□□□□□ -0.81
UBBP4-202ENST00000584755 Q8N8P6 123 aa10□□□□□ -0.81
UBBP4-202ENST00000584755 OR11H2Q8NH07 326 aa10□□□□□ -0.81
UBBP4-202ENST00000584755 RPL39LQ96EH5 51 aaKnown RBP10□□□□□ -0.81
UBBP4-202ENST00000584755 NXT2Q9NPJ8 142 aaKnown RBP10□□□□□ -0.81
UBBP4-202ENST00000584755 AP5S1Q9NUS5 200 aa10□□□□□ -0.81
UBBP4-202ENST00000584755 TP53TG1Q9Y2A0 90 aa10□□□□□ -0.81
UBBP4-202ENST00000584755 NOTCH1P46531 2555 aa10□□□□□ -0.81
UBBP4-202ENST00000584755 TRAV4A0A0B4J268 109 aa9.99□□□□□ -0.81
UBBP4-202ENST00000584755 F5H697 171 aa9.99□□□□□ -0.81
UBBP4-202ENST00000584755 PMCHP20382 165 aa9.99□□□□□ -0.81
UBBP4-202ENST00000584755 SUMO2P61956 95 aaKnown RBP9.99□□□□□ -0.81
UBBP4-202ENST00000584755 FA2HQ7L5A8 372 aa9.99□□□□□ -0.81
UBBP4-202ENST00000584755 C18orf15Q96N68 181 aa9.99□□□□□ -0.81
UBBP4-202ENST00000584755 MGAM2Q2M2H8 2515 aa9.99□□□□□ -0.81
UBBP4-202ENST00000584755 CIDEAO60543 219 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 IGHV3-53P01767 116 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 MIFP14174 115 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 AMTP48728 403 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 KRTAP21-3Q3LHN1 58 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 Q8NAQ8 132 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 SMIM2Q9BVW6 85 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 NBEAL2Q6ZNJ1 2754 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 IGHV1-24A0A0C4DH33 117 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 H7C1H1 209 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 POLR2KP53803 58 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms