RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 Q6ZSA8 131 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 SH2D6Q7Z4S9 175 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 SMIM20Q8N5G0 67 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 C12orf45Q8N5I9 185 aaPredicted RBP3.54□□□□□ -1.84
VAPA-207ENST00000583879 ZFAND2AQ8N6M9 145 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 OR10G4Q8NGN3 311 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 MCFD2Q8NI22 146 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 BLNKQ8WV28 456 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 PCNPQ8WW12 178 aaKnown RBP3.54□□□□□ -1.84
VAPA-207ENST00000583879 DEDD2Q8WXF8 326 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 RASL10AQ92737 203 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 BTF3L4Q96K17 158 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 TXNDC17Q9BRA2 123 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 TMEM14CQ9P0S9 112 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 ZNF492Q9P255 531 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 WDR83OSQ9Y284 106 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 TIMM9Q9Y5J7 89 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 TINCRA0A1B0GVN0 87 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 C7orf66A4D0T2 115 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 C9JCJ5 164 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 MBPP02686 304 aaPredicted RBP3.53□□□□□ -1.84
VAPA-207ENST00000583879 RPL29P47914 159 aaKnown RBP3.53□□□□□ -1.84
VAPA-207ENST00000583879 CKS1BP61024 79 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 PDE6HQ13956 83 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 PYDC2Q56P42 97 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 LINC01556Q5JQF7 62 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 TMEM78Q5T7P6 136 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 PRR9Q5T870 116 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 MIC13Q5XKP0 118 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 EXOC3-AS1Q8N2X6 119 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 SFT2D1Q8WV19 159 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 SLIRPQ9GZT3 109 aaKnown RBP3.53□□□□□ -1.84
VAPA-207ENST00000583879 SLC25A31Q9H0C2 315 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 C20orf85Q9H1P6 137 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 AAMDCQ9H7C9 122 aa3.53□□□□□ -1.84
VAPA-207ENST00000583879 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 TRAV8-6A0A0B4J262 113 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 TRAV4A0A0B4J268 109 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 LOC100131303A0A0U1RQF7 123 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 K7ERU9 68 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 ATP5LO75964 103 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 PFN1P07737 140 aaKnown RBP3.52□□□□□ -1.85
VAPA-207ENST00000583879 NPSP0C0P6 89 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 DDTP30046 118 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 ZNF138P52744 262 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 TMBIM6P55061 237 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 KRTAP10-4P60372 401 aaPredicted RBP3.52□□□□□ -1.85
VAPA-207ENST00000583879 PKIAP61925 76 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 IAH1Q2TAA2 248 aaPredicted RBP3.52□□□□□ -1.85
VAPA-207ENST00000583879 TDRG1Q3Y452 100 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 MUC21Q5SSG8 566 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 SIGMAR1Q99720 223 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 TM2D2Q9BX73 214 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 MAP1LC3AQ9H492 121 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 Q9HAA7 133 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 SLC39A9Q9NUM3 307 aa3.52□□□□□ -1.85
VAPA-207ENST00000583879 IGKV2-40A0A087WW87 121 aaPredicted RBP3.51□□□□□ -1.85
VAPA-207ENST00000583879 FAM24AA6NFZ4 105 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 FAM74A7A6NL05 159 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 CST7O76096 145 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 NDUFB6O95139 128 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 IGKV2D-40P01614 121 aaPredicted RBP3.51□□□□□ -1.85
VAPA-207ENST00000583879 IGHV3-30P01768 117 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 IGHV3-33P01772 117 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 IGHV3-30-3P0DP02 117 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 IGHV3-30-5P0DP03 117 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 PYYP10082 97 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 GAGE5Q13069 117 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 GAGE6Q13070 117 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 WFDC2Q14508 124 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 ZNF266Q14584 549 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 ZNF846Q147U1 533 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 TMEM183BQ1AE95 376 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 FAM74A3Q4VXF1 159 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 ATRAIDQ6UW56 229 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 SCXQ7RTU7 201 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 FAM19A5Q7Z5A7 132 aaPredicted RBP3.51□□□□□ -1.85
VAPA-207ENST00000583879 TMEM183AQ8IXX5 376 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 OR11H4Q8NGC9 324 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 OR13C6PQ8NH95 151 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 UQCC1Q9NVA1 299 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 SPANXCQ9NY87 97 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 V9GYH0 126 aa3.51□□□□□ -1.85
VAPA-207ENST00000583879 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.5□□□□□ -1.85
VAPA-207ENST00000583879 TRGV11A0A075B6L2 103 aa3.5□□□□□ -1.85
VAPA-207ENST00000583879 TGIF2-C20orf24A0A0A6YYL0 155 aa3.5□□□□□ -1.85
VAPA-207ENST00000583879 IGHV3-16A0A0C4DH30 117 aa3.5□□□□□ -1.85
VAPA-207ENST00000583879 RBAKDNA6NC62 111 aa3.5□□□□□ -1.85
VAPA-207ENST00000583879 LINC00862A6NCI5 91 aa3.5□□□□□ -1.85
VAPA-207ENST00000583879 NAP1L6A6NFF2 107 aa3.5□□□□□ -1.85
VAPA-207ENST00000583879 M0R2P5 195 aa3.5□□□□□ -1.85
VAPA-207ENST00000583879 GNRH2O43555 120 aa3.5□□□□□ -1.85
VAPA-207ENST00000583879 TRIAP1O43715 76 aa3.5□□□□□ -1.85
VAPA-207ENST00000583879 PTTG1O95997 202 aa3.5□□□□□ -1.85
VAPA-207ENST00000583879 SUMO2P61956 95 aaKnown RBP3.5□□□□□ -1.85
VAPA-207ENST00000583879 PNRC1Q12796 327 aaPredicted RBP3.5□□□□□ -1.85
VAPA-207ENST00000583879 LAGE3Q14657 143 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms