RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	TNFSF18	Q9UNG2	199 aa		5.7	□□□□□ -1.5
NUP85-223	ENST00000583877	URGCP-MRPS24	S4R325	110 aa		5.7	□□□□□ -1.5
NUP85-223	ENST00000583877	IGKV2D-24	A0A075B6R9	120 aa		5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	IGLV2-11	P01706	119 aa		5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	PET100	P0DJ07	73 aa		5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	TAS2R45	P59539	299 aa		5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	RPL37A	P61513	92 aa	Known RBP	5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	KHDC3L	Q587J8	217 aa		5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	FFAR4	Q5NUL3	377 aa		5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	EIF5AL1	Q6IS14	154 aa	Known RBP	5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	DPPA3	Q6W0C5	159 aa		5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	GOLT1A	Q6ZVE7	132 aa		5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	NDFIP1	Q9BT67	221 aa		5.69	□□□□□ -1.5
NUP85-223	ENST00000583877	MBD2	Q9UBB5	411 aa		5.69	□□□□□ -1.5
NUP85-223	ENST00000583877		A0A087WWC5	75 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	TRAV8-1	A0A0A6YYK1	113 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877		F5H697	171 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	EIF3G	O75821	320 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	SEC11B	P0C7V7	166 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	LINC00694	P0DN24	101 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	TPT1	P13693	172 aa	Known RBP	5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	LRRC37A5P	Q49AS3	106 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	XP32	Q5T750	250 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	ALKAL2	Q6UX46	152 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	SVBP	Q8N300	66 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	ARL6IP6	Q8N6S5	226 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	PTH2	Q96A98	100 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	TVP23C	Q96ET8	276 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	SGK494	Q96LW2	274 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	WDR61	Q9GZS3	305 aa	Known RBP	5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	OTOR	Q9NRC9	128 aa		5.68	□□□□□ -1.5
NUP85-223	ENST00000583877	PGPEP1L	A6NFU8	196 aa		5.67	□□□□□ -1.5
NUP85-223	ENST00000583877	TAAR5	O14804	337 aa		5.67	□□□□□ -1.5
NUP85-223	ENST00000583877	HNRNPA3	P51991	378 aa	Known RBP	5.67	□□□□□ -1.5
NUP85-223	ENST00000583877	GNG5	P63218	68 aa		5.67	□□□□□ -1.5
NUP85-223	ENST00000583877	ZNF506	Q5JVG8	444 aa		5.67	□□□□□ -1.5
NUP85-223	ENST00000583877	KCNIP4	Q6PIL6	250 aa		5.67	□□□□□ -1.5
NUP85-223	ENST00000583877	CYB561D1	Q8N8Q1	229 aa		5.67	□□□□□ -1.5
NUP85-223	ENST00000583877	SCGB1C1	Q8TD33	95 aa		5.67	□□□□□ -1.5
NUP85-223	ENST00000583877	DAZAP1	Q96EP5	407 aa	Known RBP	5.67	□□□□□ -1.5
NUP85-223	ENST00000583877	C9orf85	Q96MD7	179 aa		5.67	□□□□□ -1.5
NUP85-223	ENST00000583877	KLK12	Q9UKR0	248 aa		5.67	□□□□□ -1.5
NUP85-223	ENST00000583877		A0A1W2PPV4	95 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	KRTAP23-1	A1A580	65 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	TRIAP1	O43715	76 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	SNAPIN	O95295	136 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	SIX6	O95475	246 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	MT1HL1	P0DM35	61 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	S100A4	P26447	101 aa	Known RBP	5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	C14orf177	Q52M58	125 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	ZFP2	Q6ZN57	461 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	NIT1	Q86X76	327 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	OR10G9	Q8NGN4	311 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	UBE2W	Q96B02	151 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	DNAJC30	Q96LL9	226 aa		5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	NKX6-2	Q9C056	277 aa	Predicted RBP	5.66	□□□□□ -1.5
NUP85-223	ENST00000583877	CARHSP1	Q9Y2V2	147 aa	Known RBP	5.66	□□□□□ -1.5
NUP85-223	ENST00000583877		A0A087WX48	190 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	SCO1	O75880	301 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	GCG	P01275	180 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	FGF8	P55075	233 aa	Predicted RBP	5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	S100A12	P80511	92 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	ELOB	Q15370	118 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	PIK3CD-AS1	Q5SR53	167 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	C10orf91	Q5T1B1	145 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	ATRAID	Q6UW56	229 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	TMEM75	Q8N9X5	138 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	PPP1R1C	Q8WVI7	109 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	ZNF471	Q9BX82	626 aa	Predicted RBP	5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	SEC11C	Q9BY50	192 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	SAMD10	Q9BYL1	202 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	SMIM3	Q9BZL3	60 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	PARL	Q9H300	379 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	OR5AC2	Q9NZP5	309 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	C11orf21	Q9P2W6	132 aa		5.65	□□□□□ -1.5
NUP85-223	ENST00000583877	TMEM218	A2RU14	115 aa		5.64	□□□□□ -1.51
NUP85-223	ENST00000583877		A8MWV9	139 aa		5.64	□□□□□ -1.51
NUP85-223	ENST00000583877		K7EQM0	130 aa		5.64	□□□□□ -1.51
NUP85-223	ENST00000583877	HMGB3	O15347	200 aa	Known RBP	5.64	□□□□□ -1.51
NUP85-223	ENST00000583877	APOC3	P02656	99 aa		5.64	□□□□□ -1.51
NUP85-223	ENST00000583877	RNASE3	P12724	160 aa	Known RBP	5.64	□□□□□ -1.51
NUP85-223	ENST00000583877	ZNF80	P51504	273 aa	Predicted RBP	5.64	□□□□□ -1.51
NUP85-223	ENST00000583877	BLOC1S1	P78537	153 aa		5.64	□□□□□ -1.51
NUP85-223	ENST00000583877		Q0VG73	95 aa		5.64	□□□□□ -1.51
NUP85-223	ENST00000583877		Q6ZRU5	148 aa		5.64	□□□□□ -1.51
NUP85-223	ENST00000583877	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.64	□□□□□ -1.51
NUP85-223	ENST00000583877	LINC00479	Q96M42	142 aa		5.64	□□□□□ -1.51
NUP85-223	ENST00000583877	AQP10	Q96PS8	301 aa		5.64	□□□□□ -1.51
NUP85-223	ENST00000583877	CHCHD7	Q9BUK0	85 aa		5.64	□□□□□ -1.51
NUP85-223	ENST00000583877		Q9UF83	564 aa		5.64	□□□□□ -1.51
NUP85-223	ENST00000583877	SERTM2	A0A1B0GWG4	89 aa		5.63	□□□□□ -1.51
NUP85-223	ENST00000583877	GAGE12H	A6NDE8	117 aa		5.63	□□□□□ -1.51
NUP85-223	ENST00000583877	TMEM262	E9PQX1	116 aa		5.63	□□□□□ -1.51
NUP85-223	ENST00000583877	UFSP1	Q6NVU6	142 aa		5.63	□□□□□ -1.51
NUP85-223	ENST00000583877	PQLC2	Q6ZP29	291 aa		5.63	□□□□□ -1.51
NUP85-223	ENST00000583877	PRNT	Q86SH4	94 aa		5.63	□□□□□ -1.51
NUP85-223	ENST00000583877	C14orf178	Q8N769	122 aa	Predicted RBP	5.63	□□□□□ -1.51
NUP85-223	ENST00000583877	OR2G3	Q8NGZ4	309 aa		5.63	□□□□□ -1.51
NUP85-223	ENST00000583877	PSG8	Q9UQ74	426 aa		5.63	□□□□□ -1.51

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