RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 PHOX2AO14813 284 aa12.79□□□□□ -0.36
SNX11-212ENST00000583320 RAB4BP61018 213 aa12.79□□□□□ -0.36
SNX11-212ENST00000583320 TWIST1Q15672 202 aa12.79□□□□□ -0.36
SNX11-212ENST00000583320 PIK3CD-AS1Q5SR53 167 aa12.79□□□□□ -0.36
SNX11-212ENST00000583320 SPANXN1Q5VSR9 72 aa12.79□□□□□ -0.36
SNX11-212ENST00000583320 Q6ZWC4 215 aa12.79□□□□□ -0.36
SNX11-212ENST00000583320 MRPL18Q9H0U6 180 aaKnown RBP12.79□□□□□ -0.36
SNX11-212ENST00000583320 MDFICQ9P1T7 246 aa12.79□□□□□ -0.36
SNX11-212ENST00000583320 RAB5BP61020 215 aa12.78□□□□□ -0.36
SNX11-212ENST00000583320 FABP9Q0Z7S8 132 aa12.78□□□□□ -0.36
SNX11-212ENST00000583320 SYT8Q8NBV8 401 aa12.78□□□□□ -0.36
SNX11-212ENST00000583320 SPXQ9BT56 116 aa12.78□□□□□ -0.36
SNX11-212ENST00000583320 TMEM191AQ9H0A3 160 aa12.78□□□□□ -0.36
SNX11-212ENST00000583320 APCSP02743 223 aa12.77□□□□□ -0.37
SNX11-212ENST00000583320 TRGC1P0CF51 173 aa12.77□□□□□ -0.37
SNX11-212ENST00000583320 DMRTA1Q5VZB9 504 aa12.77□□□□□ -0.37
SNX11-212ENST00000583320 SMIM15Q7Z3B0 74 aa12.77□□□□□ -0.37
SNX11-212ENST00000583320 C11orf72Q8NBR9 251 aa12.77□□□□□ -0.37
SNX11-212ENST00000583320 TMEM263Q8WUH6 116 aaKnown RBP12.77□□□□□ -0.37
SNX11-212ENST00000583320 FRZBQ92765 325 aa12.77□□□□□ -0.37
SNX11-212ENST00000583320 RNF183Q96D59 192 aa12.77□□□□□ -0.37
SNX11-212ENST00000583320 TIMM8BQ9Y5J9 83 aaPredicted RBP12.77□□□□□ -0.37
SNX11-212ENST00000583320 SMIM9A6NGZ8 99 aa12.76□□□□□ -0.37
SNX11-212ENST00000583320 NANOS2P60321 138 aaKnown RBP12.76□□□□□ -0.37
SNX11-212ENST00000583320 NDUFAF3Q9BU61 184 aa12.76□□□□□ -0.37
SNX11-212ENST00000583320 IGHV3OR16-12A0A075B7B8 117 aa12.75□□□□□ -0.37
SNX11-212ENST00000583320 MUC21A0A0G2JKD1 596 aa12.75□□□□□ -0.37
SNX11-212ENST00000583320 MUC21A0A140T8X8 626 aa12.75□□□□□ -0.37
SNX11-212ENST00000583320 HTN1P15515 57 aa12.75□□□□□ -0.37
SNX11-212ENST00000583320 HSPG2P98160 4391 aa12.75□□□□□ -0.37
SNX11-212ENST00000583320 FAM104BQ5XKR9 115 aa12.75□□□□□ -0.37
SNX11-212ENST00000583320 RNASE8Q8TDE3 154 aaKnown RBP12.75□□□□□ -0.37
SNX11-212ENST00000583320 C16orf74Q96GX8 76 aa12.75□□□□□ -0.37
SNX11-212ENST00000583320 MSRB1Q9NZV6 116 aa12.75□□□□□ -0.37
SNX11-212ENST00000583320 M0R2P5 195 aa12.74□□□□□ -0.37
SNX11-212ENST00000583320 M0R381 172 aa12.74□□□□□ -0.37
SNX11-212ENST00000583320 SLAQ13239 276 aa12.74□□□□□ -0.37
SNX11-212ENST00000583320 RRN3P1Q2M238 152 aa12.74□□□□□ -0.37
SNX11-212ENST00000583320 AZU1P20160 251 aa12.73□□□□□ -0.37
SNX11-212ENST00000583320 SSTP61278 116 aa12.73□□□□□ -0.37
SNX11-212ENST00000583320 AP1S3Q96PC3 154 aa12.73□□□□□ -0.37
SNX11-212ENST00000583320 GSN-AS1Q9NRJ2 163 aa12.73□□□□□ -0.37
SNX11-212ENST00000583320 LINC00336Q6ZUF6 198 aa12.72□□□□□ -0.37
SNX11-212ENST00000583320 HIST1H2BKO60814 126 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 PRM2P04554 102 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 HIST1H2BJP06899 126 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 HIST1H2BOP23527 126 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 HIST1H2BBP33778 126 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 HIST1H2BDP58876 126 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 HIST1H2BCP62807 126 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 DAZ2Q13117 558 aaKnown RBP12.71□□□□□ -0.37
SNX11-212ENST00000583320 HIST2H2BEQ16778 126 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.71□□□□□ -0.37
SNX11-212ENST00000583320 HIST1H2BHQ93079 126 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 HIST1H2BNQ99877 126 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 HIST1H2BMQ99879 126 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 DPH3P1Q9H4G8 78 aa12.71□□□□□ -0.37
SNX11-212ENST00000583320 TMA7Q9Y2S6 64 aaKnown RBP12.71□□□□□ -0.37
SNX11-212ENST00000583320 HERC1Q15751 4861 aa12.7□□□□□ -0.38
SNX11-212ENST00000583320 PPBPP02775 128 aa12.7□□□□□ -0.38
SNX11-212ENST00000583320 RAB4AP20338 218 aa12.7□□□□□ -0.38
SNX11-212ENST00000583320 EVI2AP22794 236 aa12.7□□□□□ -0.38
SNX11-212ENST00000583320 LGALS9BQ3B8N2 356 aa12.7□□□□□ -0.38
SNX11-212ENST00000583320 ZNF876PQ49A33 203 aa12.7□□□□□ -0.38
SNX11-212ENST00000583320 AMN1Q8IY45 258 aa12.7□□□□□ -0.38
SNX11-212ENST00000583320 RASL10AQ92737 203 aa12.7□□□□□ -0.38
SNX11-212ENST00000583320 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
SNX11-212ENST00000583320 APLNQ9ULZ1 77 aa12.7□□□□□ -0.38
SNX11-212ENST00000583320 X6R8D5 127 aa12.7□□□□□ -0.38
SNX11-212ENST00000583320 A8MWV9 139 aa12.69□□□□□ -0.38
SNX11-212ENST00000583320 POM121L12Q8N7R1 296 aa12.69□□□□□ -0.38
SNX11-212ENST00000583320 KIF25-AS1Q9Y6Z4 181 aa12.69□□□□□ -0.38
SNX11-212ENST00000583320 PLAC8L1A1L4L8 177 aa12.68□□□□□ -0.38
SNX11-212ENST00000583320 SMIM17P0DL12 118 aa12.68□□□□□ -0.38
SNX11-212ENST00000583320 KIAA1644Q3SXP7 199 aa12.68□□□□□ -0.38
SNX11-212ENST00000583320 MRPL51Q4U2R6 128 aaKnown RBP12.68□□□□□ -0.38
SNX11-212ENST00000583320 C11orf45Q8TAV5 145 aa12.68□□□□□ -0.38
SNX11-212ENST00000583320 ALKBH7Q9BT30 221 aaPredicted RBP12.68□□□□□ -0.38
SNX11-212ENST00000583320 RTL8CO15255 209 aa12.67□□□□□ -0.38
SNX11-212ENST00000583320 C14orf178Q8N769 122 aaPredicted RBP12.67□□□□□ -0.38
SNX11-212ENST00000583320 MRAP2Q96G30 205 aa12.67□□□□□ -0.38
SNX11-212ENST00000583320 DEFB4AO15263 64 aa12.66□□□□□ -0.38
SNX11-212ENST00000583320 MIFP14174 115 aa12.66□□□□□ -0.38
SNX11-212ENST00000583320 SRIP30626 198 aa12.66□□□□□ -0.38
SNX11-212ENST00000583320 Q0VG73 95 aa12.66□□□□□ -0.38
SNX11-212ENST00000583320 OR10J3Q5JRS4 329 aa12.66□□□□□ -0.38
SNX11-212ENST00000583320 ORMDL3Q8N138 153 aa12.66□□□□□ -0.38
SNX11-212ENST00000583320 OR11H2Q8NH07 326 aa12.66□□□□□ -0.38
SNX11-212ENST00000583320 LAMTOR2Q9Y2Q5 125 aa12.66□□□□□ -0.38
SNX11-212ENST00000583320 PRSS29PA6NIE9 313 aa12.65□□□□□ -0.38
SNX11-212ENST00000583320 IGLL5B9A064 214 aa12.65□□□□□ -0.38
SNX11-212ENST00000583320 CRYGDP07320 174 aa12.65□□□□□ -0.38
SNX11-212ENST00000583320 LINC00315P59091 139 aa12.65□□□□□ -0.38
SNX11-212ENST00000583320 COA6Q5JTJ3 125 aaKnown RBP12.65□□□□□ -0.38
SNX11-212ENST00000583320 C11orf68Q9H3H3 251 aaKnown RBP12.65□□□□□ -0.38
SNX11-212ENST00000583320 RHODO00212 210 aa12.64□□□□□ -0.39
SNX11-212ENST00000583320 RS1O15537 224 aa12.64□□□□□ -0.39
SNX11-212ENST00000583320 S100A6P06703 90 aa12.64□□□□□ -0.39
SNX11-212ENST00000583320 CKS2P33552 79 aa12.64□□□□□ -0.39
SNX11-212ENST00000583320 TCTAP57738 103 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms