RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 LINC00477Q96M19 166 aa12.97□□□□□ -0.33
ERBB2-212ENST00000582788 DNAJC9-AS1A6NH13 148 aa12.96□□□□□ -0.33
ERBB2-212ENST00000582788 SOCS3O14543 225 aa12.96□□□□□ -0.33
ERBB2-212ENST00000582788 EDN2P20800 178 aa12.96□□□□□ -0.33
ERBB2-212ENST00000582788 RPL24P83731 157 aaKnown RBP12.96□□□□□ -0.33
ERBB2-212ENST00000582788 FOXI2Q6ZQN5 318 aa12.96□□□□□ -0.33
ERBB2-212ENST00000582788 DAZ1Q9NQZ3 744 aaKnown RBP12.96□□□□□ -0.33
ERBB2-212ENST00000582788 SONP18583 2426 aaKnown RBP12.96□□□□□ -0.33
ERBB2-212ENST00000582788 CUBNO60494 3623 aa12.96□□□□□ -0.33
ERBB2-212ENST00000582788 TEX48A0A1B0GUV7 120 aa12.96□□□□□ -0.34
ERBB2-212ENST00000582788 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.96□□□□□ -0.34
ERBB2-212ENST00000582788 RNF152Q8N8N0 203 aa12.96□□□□□ -0.34
ERBB2-212ENST00000582788 ANK3Q12955 4377 aaKnown RBP12.95□□□□□ -0.34
ERBB2-212ENST00000582788 LINC01619G3V211 115 aa12.95□□□□□ -0.34
ERBB2-212ENST00000582788 RASL10AQ92737 203 aa12.95□□□□□ -0.34
ERBB2-212ENST00000582788 SIGMAR1Q99720 223 aa12.95□□□□□ -0.34
ERBB2-212ENST00000582788 RHPN1-AS1Q9BWJ2 59 aa12.95□□□□□ -0.34
ERBB2-212ENST00000582788 ESM1Q9NQ30 184 aa12.95□□□□□ -0.34
ERBB2-212ENST00000582788 NHP2Q9NX24 153 aaKnown RBP12.95□□□□□ -0.34
ERBB2-212ENST00000582788 TRAV21A0A0B4J279 112 aa12.95□□□□□ -0.34
ERBB2-212ENST00000582788 F8VRH5 84 aa12.95□□□□□ -0.34
ERBB2-212ENST00000582788 H7C1H1 209 aa12.95□□□□□ -0.34
ERBB2-212ENST00000582788 OVOL1O14753 267 aa12.95□□□□□ -0.34
ERBB2-212ENST00000582788 LGALS1P09382 135 aaKnown RBP12.95□□□□□ -0.34
ERBB2-212ENST00000582788 UBE2E2Q96LR5 201 aa12.95□□□□□ -0.34
ERBB2-212ENST00000582788 K7EMT4 169 aa12.94□□□□□ -0.34
ERBB2-212ENST00000582788 SUMO2P61956 95 aaKnown RBP12.94□□□□□ -0.34
ERBB2-212ENST00000582788 ORMDL2Q53FV1 153 aa12.94□□□□□ -0.34
ERBB2-212ENST00000582788 OR10J6PQ8NGY7 276 aa12.94□□□□□ -0.34
ERBB2-212ENST00000582788 TOMM6Q96B49 74 aa12.94□□□□□ -0.34
ERBB2-212ENST00000582788 C20orf78Q9BR46 151 aa12.94□□□□□ -0.34
ERBB2-212ENST00000582788 HIVEP1P15822 2718 aa12.94□□□□□ -0.34
ERBB2-212ENST00000582788 IGLL5B9A064 214 aa12.93□□□□□ -0.34
ERBB2-212ENST00000582788 J3KRW8 73 aa12.93□□□□□ -0.34
ERBB2-212ENST00000582788 M0R381 172 aa12.93□□□□□ -0.34
ERBB2-212ENST00000582788 CD300EQ496F6 205 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-212ENST00000582788 Q6ZSV7 163 aa12.93□□□□□ -0.34
ERBB2-212ENST00000582788 FAM19A4Q96LR4 140 aa12.93□□□□□ -0.34
ERBB2-212ENST00000582788 DPH3P1Q9H4G8 78 aa12.93□□□□□ -0.34
ERBB2-212ENST00000582788 ACANP16112 2415 aa12.93□□□□□ -0.34
ERBB2-212ENST00000582788 F8P00451 2351 aa12.93□□□□□ -0.34
ERBB2-212ENST00000582788 IGHV4OR15-8A0A075B7B6 117 aa12.93□□□□□ -0.34
ERBB2-212ENST00000582788 A0A087WW49 117 aa12.93□□□□□ -0.34
ERBB2-212ENST00000582788 MED14OSP0DP75 135 aa12.93□□□□□ -0.34
ERBB2-212ENST00000582788 SPANXB1Q9NS25 103 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-212ENST00000582788 SPRY2O43597 315 aa12.92□□□□□ -0.34
ERBB2-212ENST00000582788 ASIPP42127 132 aa12.92□□□□□ -0.34
ERBB2-212ENST00000582788 RPL39LQ96EH5 51 aaKnown RBP12.92□□□□□ -0.34
ERBB2-212ENST00000582788 K7EMI3 77 aa12.91□□□□□ -0.34
ERBB2-212ENST00000582788 DEFB1P60022 68 aa12.91□□□□□ -0.34
ERBB2-212ENST00000582788 APRG1Q8IVJ8 170 aa12.91□□□□□ -0.34
ERBB2-212ENST00000582788 NEXN-AS1Q8NBZ9 246 aa12.91□□□□□ -0.34
ERBB2-212ENST00000582788 SCGB3A1Q96QR1 104 aa12.91□□□□□ -0.34
ERBB2-212ENST00000582788 SMR3AQ99954 134 aa12.91□□□□□ -0.34
ERBB2-212ENST00000582788 ANXA2RQ3ZCQ2 193 aa12.91□□□□□ -0.34
ERBB2-212ENST00000582788 C18orf65Q6ZTR6 163 aa12.91□□□□□ -0.34
ERBB2-212ENST00000582788 C14orf178Q8N769 122 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-212ENST00000582788 ZNF479Q96JC4 524 aa12.91□□□□□ -0.34
ERBB2-212ENST00000582788 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
ERBB2-212ENST00000582788 TRBV7-3A0A075B6L6 115 aa12.9□□□□□ -0.34
ERBB2-212ENST00000582788 A0A1B0GWB2 263 aa12.9□□□□□ -0.34
ERBB2-212ENST00000582788 AZU1P20160 251 aa12.9□□□□□ -0.34
ERBB2-212ENST00000582788 S100A4P26447 101 aaKnown RBP12.9□□□□□ -0.34
ERBB2-212ENST00000582788 RPL11P62913 178 aaKnown RBP12.9□□□□□ -0.34
ERBB2-212ENST00000582788 PHLDA3Q9Y5J5 127 aa12.9□□□□□ -0.34
ERBB2-212ENST00000582788 IGKV3-7A0A075B6H7 116 aa12.89□□□□□ -0.35
ERBB2-212ENST00000582788 C12orf74Q32Q52 190 aa12.89□□□□□ -0.35
ERBB2-212ENST00000582788 TCTEX1D4Q5JR98 221 aa12.89□□□□□ -0.35
ERBB2-212ENST00000582788 GAGE12HA6NDE8 117 aa12.89□□□□□ -0.35
ERBB2-212ENST00000582788 SYNJ2BPP57105 145 aa12.89□□□□□ -0.35
ERBB2-212ENST00000582788 MYMXA0A1B0GTQ4 84 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 OR11H12B2RN74 326 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 HOXD3P31249 432 aaPredicted RBP12.88□□□□□ -0.35
ERBB2-212ENST00000582788 OR11H1Q8NG94 326 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 OR11H2Q8NH07 326 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 HIST1H4GQ99525 98 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 TRBV7-9A0A0J9YWB2 115 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 NXPH4O95158 308 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 MGPP08493 103 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 RNASE3P12724 160 aaKnown RBP12.88□□□□□ -0.35
ERBB2-212ENST00000582788 SRD5A1P18405 259 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 RNASE4P34096 147 aaKnown RBP12.88□□□□□ -0.35
ERBB2-212ENST00000582788 DEFB136Q30KP8 78 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 C2orf66Q6UXQ4 117 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 POM121L12Q8N7R1 296 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 BAALCQ8WXS3 180 aa12.88□□□□□ -0.35
ERBB2-212ENST00000582788 RRN3P1Q2M238 152 aa12.87□□□□□ -0.35
ERBB2-212ENST00000582788 AGRNO00468 2067 aa12.87□□□□□ -0.35
ERBB2-212ENST00000582788 F6UB75 175 aa12.86□□□□□ -0.35
ERBB2-212ENST00000582788 LGALS9O00182 355 aa12.86□□□□□ -0.35
ERBB2-212ENST00000582788 GNRH2O43555 120 aa12.86□□□□□ -0.35
ERBB2-212ENST00000582788 WFDC2Q14508 124 aa12.86□□□□□ -0.35
ERBB2-212ENST00000582788 HIST2H2BDQ6DRA6 164 aa12.86□□□□□ -0.35
ERBB2-212ENST00000582788 TSSC4Q9Y5U2 329 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-212ENST00000582788 A0A1B0GV72 72 aa12.85□□□□□ -0.35
ERBB2-212ENST00000582788 GTSF1LQ9H1H1 148 aa12.85□□□□□ -0.35
ERBB2-212ENST00000582788 TEP1Q99973 2627 aaKnown RBP12.85□□□□□ -0.35
ERBB2-212ENST00000582788 PRSS29PA6NIE9 313 aa12.84□□□□□ -0.35
ERBB2-212ENST00000582788 PPP1R17O96001 155 aa12.84□□□□□ -0.35
ERBB2-212ENST00000582788 SLURP1P55000 103 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms