RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 PIMREGQ9BSJ6 248 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 PRO0461Q9UI25 63 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 SPG11Q96JI7 2443 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.24□□□□□ -0.778e-8■■■□□ 18.9
RNF43-205ENST00000581868 IGIPA6NJ69 53 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 KLLNB2CW77 178 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 H3BUA1 57 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 GNLYP22749 145 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 TMEM170BQ5T4T1 132 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 ZNF256Q9Y2P7 627 aaPredicted RBP10.24□□□□□ -0.77
RNF43-205ENST00000581868 TRAV12-2A0A075B6T6 113 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 SDHAF1A6NFY7 115 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 A6NJY4 79 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 VCYO14598 125 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 NXPH4O95158 308 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 ID1P41134 155 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 POLR2KP53803 58 aaKnown RBP10.24□□□□□ -0.77
RNF43-205ENST00000581868 PMVKQ15126 192 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 POM121L12Q8N7R1 296 aa10.24□□□□□ -0.77
RNF43-205ENST00000581868 IGHV4OR15-8A0A075B7B6 117 aa10.23□□□□□ -0.77
RNF43-205ENST00000581868 A0A087WW49 117 aa10.23□□□□□ -0.77
RNF43-205ENST00000581868 TRBV7-9A0A0J9YWB2 115 aa10.23□□□□□ -0.77
RNF43-205ENST00000581868 HERVK_113P61574 105 aa10.23□□□□□ -0.77
RNF43-205ENST00000581868 ZNF688P0C7X2 276 aa10.23□□□□□ -0.77
RNF43-205ENST00000581868 PSMB2P49721 201 aa10.23□□□□□ -0.77
RNF43-205ENST00000581868 IGLV1-40P01703 118 aa10.22□□□□□ -0.77
RNF43-205ENST00000581868 DCANP1Q8TF63 244 aa10.22□□□□□ -0.77
RNF43-205ENST00000581868 CRYBG3Q68DQ2 2970 aa10.22□□□□□ -0.77
RNF43-205ENST00000581868 MDFICQ9P1T7 246 aa10.22□□□□□ -0.77
RNF43-205ENST00000581868 TSPAN13O95857 204 aa10.21□□□□□ -0.77
RNF43-205ENST00000581868 TSPEAR-AS2P59090 65 aa10.21□□□□□ -0.77
RNF43-205ENST00000581868 ZNF56Q15929 161 aa10.21□□□□□ -0.77
RNF43-205ENST00000581868 OPRPNQ99935 248 aaPredicted RBP10.21□□□□□ -0.77
RNF43-205ENST00000581868 CELSR2Q9HCU4 2923 aa10.21□□□□□ -0.77
RNF43-205ENST00000581868 ITPR1Q14643 2758 aa10.21□□□□□ -0.77
RNF43-205ENST00000581868 A0A0J9YY99 117 aa10.21□□□□□ -0.78
RNF43-205ENST00000581868 UBE2D1P51668 147 aa10.21□□□□□ -0.78
RNF43-205ENST00000581868 ZNRF2Q8NHG8 242 aa10.21□□□□□ -0.78
RNF43-205ENST00000581868 C10orf105Q8TEF2 133 aa10.21□□□□□ -0.78
RNF43-205ENST00000581868 CCL19Q99731 98 aa10.21□□□□□ -0.78
RNF43-205ENST00000581868 IGHV4-30-2A0A087WSY4 118 aa10.2□□□□□ -0.78
RNF43-205ENST00000581868 BRI3O95415 125 aa10.2□□□□□ -0.78
RNF43-205ENST00000581868 PAPPA-AS1Q5QFB9 102 aa10.2□□□□□ -0.78
RNF43-205ENST00000581868 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
RNF43-205ENST00000581868 C10orf99Q6UWK7 81 aa10.2□□□□□ -0.78
RNF43-205ENST00000581868 DLX4Q92988 240 aaPredicted RBP10.2□□□□□ -0.78
RNF43-205ENST00000581868 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
RNF43-205ENST00000581868 RPL32P62910 135 aaKnown RBP10.2□□□□□ -0.78
RNF43-205ENST00000581868 ZNF418Q8TF45 676 aaPredicted RBP10.2□□□□□ -0.78
RNF43-205ENST00000581868 CSPG4Q6UVK1 2322 aa10.19□□□□□ -0.78
RNF43-205ENST00000581868 AVPP01185 164 aa10.19□□□□□ -0.78
RNF43-205ENST00000581868 ATP5J2P56134 94 aa10.19□□□□□ -0.78
RNF43-205ENST00000581868 TIMM17AQ99595 171 aa10.19□□□□□ -0.78
RNF43-205ENST00000581868 IGHV3-16A0A0C4DH30 117 aa10.19□□□□□ -0.78
RNF43-205ENST00000581868 TGFAP01135 160 aa10.19□□□□□ -0.78
RNF43-205ENST00000581868 SMCPP49901 116 aaPredicted RBP10.19□□□□□ -0.78
RNF43-205ENST00000581868 NDUFA11Q86Y39 141 aa10.19□□□□□ -0.78
RNF43-205ENST00000581868 Q8N1Y9 231 aa10.19□□□□□ -0.78
RNF43-205ENST00000581868 TRBV27A0A0K0K1C4 114 aa10.18□□□□□ -0.78
RNF43-205ENST00000581868 K7EMT4 169 aa10.18□□□□□ -0.78
RNF43-205ENST00000581868 LGALS9O00182 355 aa10.18□□□□□ -0.78
RNF43-205ENST00000581868 MSMBP08118 114 aa10.18□□□□□ -0.78
RNF43-205ENST00000581868 SPINK13Q1W4C9 94 aa10.18□□□□□ -0.78
RNF43-205ENST00000581868 SORL1Q92673 2214 aa10.18□□□□□ -0.78
RNF43-205ENST00000581868 IGHV3-64A0A075B6Q5 118 aa10.18□□□□□ -0.78
RNF43-205ENST00000581868 CFHR3Q02985 330 aa10.18□□□□□ -0.78
RNF43-205ENST00000581868 ZNF876PQ49A33 203 aa10.18□□□□□ -0.78
RNF43-205ENST00000581868 CFAP126Q5VTH2 177 aa10.18□□□□□ -0.78
RNF43-205ENST00000581868 SPATA25Q9BR10 227 aa10.18□□□□□ -0.78
RNF43-205ENST00000581868 PTH2Q96A98 100 aa10.17□□□□□ -0.78
RNF43-205ENST00000581868 J3QQQ9 107 aa10.17□□□□□ -0.78
RNF43-205ENST00000581868 M0QY20 66 aa10.17□□□□□ -0.78
RNF43-205ENST00000581868 IGHV3-30P01768 117 aa10.17□□□□□ -0.78
RNF43-205ENST00000581868 CFC1BP0CG36 223 aa10.17□□□□□ -0.78
RNF43-205ENST00000581868 CFC1P0CG37 223 aa10.17□□□□□ -0.78
RNF43-205ENST00000581868 IGHV3-30-5P0DP03 117 aa10.17□□□□□ -0.78
RNF43-205ENST00000581868 LGALS3P17931 250 aaKnown RBP10.17□□□□□ -0.78
RNF43-205ENST00000581868 C9orf85Q96MD7 179 aa10.17□□□□□ -0.78
RNF43-205ENST00000581868 A0A0J9YX75 114 aa10.16□□□□□ -0.78
RNF43-205ENST00000581868 FOXI1Q12951 378 aa10.16□□□□□ -0.78
RNF43-205ENST00000581868 SYT8Q8NBV8 401 aa10.16□□□□□ -0.78
RNF43-205ENST00000581868 SNRPD3P62318 126 aaKnown RBP10.16□□□□□ -0.78
RNF43-205ENST00000581868 SLC25A29Q8N8R3 303 aa10.16□□□□□ -0.78
RNF43-205ENST00000581868 DUX5Q96PT3 197 aa10.16□□□□□ -0.78
RNF43-205ENST00000581868 C1QTNF4Q9BXJ3 329 aa10.16□□□□□ -0.78
RNF43-205ENST00000581868 TRBV6-5A0A0K0K1A5 114 aa10.15□□□□□ -0.78
RNF43-205ENST00000581868 IGHV4-59P01825 116 aa10.15□□□□□ -0.78
RNF43-205ENST00000581868 HTN1P15515 57 aa10.15□□□□□ -0.78
RNF43-205ENST00000581868 UBE2D3P61077 147 aa10.15□□□□□ -0.78
RNF43-205ENST00000581868 UBE2D2P62837 147 aa10.15□□□□□ -0.78
RNF43-205ENST00000581868 NFE4Q86UQ8 179 aa10.15□□□□□ -0.78
RNF43-205ENST00000581868 IGHV1OR15-1A0A075B7D0 117 aa10.15□□□□□ -0.79
RNF43-205ENST00000581868 SCGB1C2P0DMR2 95 aa10.15□□□□□ -0.79
RNF43-205ENST00000581868 PSMB8P28062 276 aa10.15□□□□□ -0.79
RNF43-205ENST00000581868 DOPEY2Q9Y3R5 2298 aa10.15□□□□□ -0.79
RNF43-205ENST00000581868 TCL1BO95988 128 aa10.14□□□□□ -0.79
RNF43-205ENST00000581868 P0DMU3 169 aa10.14□□□□□ -0.79
RNF43-205ENST00000581868 FAM231AP0DMU4 169 aa10.14□□□□□ -0.79
RNF43-205ENST00000581868 FAM231CP0DMU5 169 aa10.14□□□□□ -0.79
RNF43-205ENST00000581868 SYNJ2BPP57105 145 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms