RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 RBAKDNA6NC62 111 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 IFNA17P01571 189 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 HMGN1P05114 100 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 CCKP06307 115 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 IGLC6P0CF74 106 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 GUCA1AP43080 201 aaPredicted RBP0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 ZNF137PP52743 207 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 RRAS2P62070 204 aaPredicted RBP0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 SARNPP82979 210 aaKnown RBP0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 HIST1H1AQ02539 215 aaPredicted RBP0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 CLLU1Q5K131 121 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 SPANXN1Q5VSR9 72 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 CSAG1Q6PB30 78 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 SPATA8Q6RVD6 105 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 Q86TA4 180 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 VSTM2AQ8TAG5 236 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 C1orf54Q8WWF1 131 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 COPS9Q8WXC6 57 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 DSCR8Q96T75 97 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 TPT1P8Q9HAU6 139 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 BET1LQ9NYM9 111 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 PTPRMP28827 1452 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 BCL9LQ86UU0 1499 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 PXDNQ92626 1479 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 BICRAQ9NZM4 1560 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 PRDM2Q13029 1718 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 SBF2Q86WG5 1849 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 ASXL3Q9C0F0 2248 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 NBDYA0A0U1RRE5 68 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 TCRBV3S1A0A5B6 114 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 ZNF670-ZNF695F2Z2N8 137 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 FXYD1O00168 92 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 NPFFO15130 113 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 PYYP10082 97 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 PIPP12273 146 aaPredicted RBP0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 IL7P13232 177 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 SPINT3P49223 89 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 COPZ1P61923 177 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 RPL37P61927 97 aaKnown RBP0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 SPCS2Q15005 226 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 ZNF56Q15929 161 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 CCDC58Q4VC31 144 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 GLYATL3Q5SZD4 288 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 FAM74A4Q5TZK3 123 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 CYP2G1PQ6ZSU1 146 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 C4orf33Q8N1A6 199 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 C5orf56Q8N8D9 126 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 PLAC4Q8WY50 150 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 TMEM141Q96I45 108 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 TSC22D3Q99576 134 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 PSMG3Q9BT73 122 aaPredicted RBP0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 SMIM3Q9BZL3 60 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 C10orf95Q9H7T3 257 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 TMEM14BQ9NUH8 114 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 SCP2D1Q9UJQ7 156 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 LSM2Q9Y333 95 aaKnown RBP0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 WDR7Q9Y4E6 1490 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 CDK13Q14004 1512 aaKnown RBP0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 UNC13BO14795 1591 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 SYNJ1O43426 1573 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 RYR1P21817 5038 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 CUL7Q14999 1698 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 RIMS1Q86UR5 1692 aaKnown RBP0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 KDM3BQ7LBC6 1761 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 PSME4Q14997 1843 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 DOPEY2Q9Y3R5 2298 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 PLCE1Q9P212 2302 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 F8P00451 2351 aa0.26□□□□□ -2.37
SMCHD1-206ENST00000581631 BDP1A6H8Y1 2624 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 PIEZO1Q92508 2521 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 IGF2RP11717 2491 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 KMT2CQ8NEZ4 4911 aaKnown RBP0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 CFTRP13569 1480 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 SOGA1O94964 1423 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 A0A096LNT2 108 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 TRAV17A0A0B4J275 112 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 LOC101927531A0A1B0GV80 90 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 FAM92AA1XBS5 289 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 EFCAB10A6NFE3 127 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 A6NIN4 97 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 K7ERU9 68 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 IGKCP01834 107 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 RPS25P62851 125 aaKnown RBP0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 SELENOWP63302 87 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 SSBP1Q04837 148 aaKnown RBP0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 IQCJQ1A5X6 159 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 C6orf52Q5T4I8 152 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 C12orf73Q69YU5 71 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 OR2T2Q6IF00 324 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 SLC48A1Q6P1K1 146 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 Q6ZUT4 128 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 KCNRGQ8N5I3 272 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 TSTD1Q8NFU3 115 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 ARL11Q969Q4 196 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 LINC00208Q96KT6 92 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 BPESC1Q9GZL8 116 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 RPRMQ9NS64 109 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 FAM208BQ5VWN6 2430 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 FRAS1Q86XX4 4008 aa0.25□□□□□ -2.37
SMCHD1-206ENST00000581631 TNCP24821 2201 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms