RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 C10orf82Q8WW14 230 aa0.27□□□□□ -2.37
TTC39C-207ENST00000581394 TMEM141Q96I45 108 aa0.27□□□□□ -2.37
TTC39C-207ENST00000581394 VPS25Q9BRG1 176 aa0.27□□□□□ -2.37
TTC39C-207ENST00000581394 PLAC8Q9NZF1 115 aa0.27□□□□□ -2.37
TTC39C-207ENST00000581394 ANK2Q01484 3957 aa0.27□□□□□ -2.37
TTC39C-207ENST00000581394 TMEM2Q9UHN6 1383 aa0.27□□□□□ -2.37
TTC39C-207ENST00000581394 AFDNP55196 1824 aaKnown RBP0.27□□□□□ -2.37
TTC39C-207ENST00000581394 TRAV12-2A0A075B6T6 113 aa0.26□□□□□ -2.37
TTC39C-207ENST00000581394 HMGN1P05114 100 aa0.26□□□□□ -2.37
TTC39C-207ENST00000581394 UBE2G1P62253 170 aa0.26□□□□□ -2.37
TTC39C-207ENST00000581394 SPANXN1Q5VSR9 72 aa0.26□□□□□ -2.37
TTC39C-207ENST00000581394 SLC48A1Q6P1K1 146 aa0.26□□□□□ -2.37
TTC39C-207ENST00000581394 C20orf197Q8N268 126 aa0.26□□□□□ -2.37
TTC39C-207ENST00000581394 TCEAL4Q96EI5 215 aa0.26□□□□□ -2.37
TTC39C-207ENST00000581394 PFDN5Q99471 154 aa0.26□□□□□ -2.37
TTC39C-207ENST00000581394 BET1LQ9NYM9 111 aa0.26□□□□□ -2.37
TTC39C-207ENST00000581394 ZNF142P52746 1687 aaPredicted RBP0.26□□□□□ -2.37
TTC39C-207ENST00000581394 LOC285556D6RIA3 1793 aa0.26□□□□□ -2.37
TTC39C-207ENST00000581394 MUC22E2RYF6 1773 aaPredicted RBP0.26□□□□□ -2.37
TTC39C-207ENST00000581394 ATG2AQ2TAZ0 1938 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 TANC1Q9C0D5 1861 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 KMT2DO14686 5537 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 GRIN2AQ12879 1464 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 MYOM3Q5VTT5 1437 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 GVQW2A0A096LPI5 108 aaPredicted RBP0.25□□□□□ -2.37
TTC39C-207ENST00000581394 TCRBV3S1A0A5B6 114 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 K7EP13 123 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 UBE2D1P51668 147 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 FXYD6P3P58550 94 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 RRAS2P62070 204 aaPredicted RBP0.25□□□□□ -2.37
TTC39C-207ENST00000581394 SCIMPQ6UWF3 145 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 TMEM191AQ9H0A3 160 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 PIEZO1Q92508 2521 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 AKAP11Q9UKA4 1901 aa0.25□□□□□ -2.37
TTC39C-207ENST00000581394 SSC5DA1L4H1 1573 aa0.24□□□□□ -2.37
TTC39C-207ENST00000581394 CACNA1HO95180 2353 aa0.24□□□□□ -2.37
TTC39C-207ENST00000581394 APOC1P02654 83 aa0.24□□□□□ -2.37
TTC39C-207ENST00000581394 CYP2G1PQ6ZSU1 146 aa0.24□□□□□ -2.37
TTC39C-207ENST00000581394 COX7B2Q8TF08 81 aa0.24□□□□□ -2.37
TTC39C-207ENST00000581394 LSM10Q969L4 123 aaKnown RBP0.24□□□□□ -2.37
TTC39C-207ENST00000581394 LINC00470Q9BZP3 86 aa0.24□□□□□ -2.37
TTC39C-207ENST00000581394 TMEM242Q9NWH2 141 aa0.24□□□□□ -2.37
TTC39C-207ENST00000581394 PAIP2BQ9ULR5 123 aaKnown RBP0.24□□□□□ -2.37
TTC39C-207ENST00000581394 LAMB1P07942 1786 aa0.24□□□□□ -2.37
TTC39C-207ENST00000581394 F5P12259 2224 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 IBTKQ9P2D0 1353 aaPredicted RBP0.23□□□□□ -2.37
TTC39C-207ENST00000581394 CACNA1EQ15878 2313 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 LOC100130705A0A1B0GUX0 176 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 GNG7O60262 68 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 IL5P05113 134 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 GUCA1AP43080 201 aaPredicted RBP0.23□□□□□ -2.37
TTC39C-207ENST00000581394 SSBP1Q04837 148 aaKnown RBP0.23□□□□□ -2.37
TTC39C-207ENST00000581394 CCDC58Q4VC31 144 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 C4orf33Q8N1A6 199 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 DSCR8Q96T75 97 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 FAM107BQ9H098 131 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 COA4Q9NYJ1 87 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 USP24Q9UPU5 2620 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 MYH13Q9UKX3 1938 aa0.23□□□□□ -2.37
TTC39C-207ENST00000581394 MAP2P11137 1827 aaKnown RBP0.22□□□□□ -2.37
TTC39C-207ENST00000581394 KIF13AQ9H1H9 1805 aa0.22□□□□□ -2.37
TTC39C-207ENST00000581394 FAT4Q6V0I7 4981 aa0.22□□□□□ -2.37
TTC39C-207ENST00000581394 GPR98Q8WXG9 6306 aa0.22□□□□□ -2.37
TTC39C-207ENST00000581394 RBAKDNA6NC62 111 aa0.22□□□□□ -2.37
TTC39C-207ENST00000581394 HIST1H1DP16402 221 aaKnown RBP0.22□□□□□ -2.37
TTC39C-207ENST00000581394 SELENOWP63302 87 aa0.22□□□□□ -2.37
TTC39C-207ENST00000581394 PSMG3Q9BT73 122 aaPredicted RBP0.22□□□□□ -2.37
TTC39C-207ENST00000581394 AGPAT4-IT1Q9H0P7 198 aa0.22□□□□□ -2.37
TTC39C-207ENST00000581394 MBD5Q9P267 1494 aa0.22□□□□□ -2.37
TTC39C-207ENST00000581394 LRP1Q07954 4544 aaKnown RBP0.21□□□□□ -2.38
TTC39C-207ENST00000581394 TTC28Q96AY4 2481 aa0.21□□□□□ -2.38
TTC39C-207ENST00000581394 NDUFB6O95139 128 aa0.21□□□□□ -2.38
TTC39C-207ENST00000581394 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.21□□□□□ -2.38
TTC39C-207ENST00000581394 KCNRGQ8N5I3 272 aa0.21□□□□□ -2.38
TTC39C-207ENST00000581394 SPTSSAQ969W0 71 aa0.21□□□□□ -2.38
TTC39C-207ENST00000581394 PROK2Q9HC23 129 aa0.21□□□□□ -2.38
TTC39C-207ENST00000581394 VIRMAQ69YN4 1812 aaKnown RBP0.21□□□□□ -2.38
TTC39C-207ENST00000581394 KCPQ6ZWJ8 1503 aa0.21□□□□□ -2.38
TTC39C-207ENST00000581394 BCORL1Q5H9F3 1711 aa0.21□□□□□ -2.38
TTC39C-207ENST00000581394 PLXNA1Q9UIW2 1896 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 CDK13Q14004 1512 aaKnown RBP0.2□□□□□ -2.38
TTC39C-207ENST00000581394 TRGV1A0A0A0MS02 117 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 CBLN1P23435 193 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 EDDM3BP56851 147 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 S100A7L2Q5SY68 101 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 Q8N8P6 123 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 ARL11Q969Q4 196 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 SNRNP25Q9BV90 132 aaKnown RBP0.2□□□□□ -2.38
TTC39C-207ENST00000581394 SEC11CQ9BY50 192 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 RPRMQ9NS64 109 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 CCDC167Q9P0B6 97 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 ZNF518AQ6AHZ1 1483 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 MYH6P13533 1939 aa0.2□□□□□ -2.38
TTC39C-207ENST00000581394 TPRP12270 2363 aaKnown RBP0.19□□□□□ -2.38
TTC39C-207ENST00000581394 ZMYM4Q5VZL5 1548 aa0.19□□□□□ -2.38
TTC39C-207ENST00000581394 IFT140Q96RY7 1462 aa0.19□□□□□ -2.38
TTC39C-207ENST00000581394 TRBV7-1A0A0A6YYK4 115 aa0.19□□□□□ -2.38
TTC39C-207ENST00000581394 SPAARA0A1B0GVQ0 90 aa0.19□□□□□ -2.38
TTC39C-207ENST00000581394 PIPP12273 146 aaPredicted RBP0.19□□□□□ -2.38
TTC39C-207ENST00000581394 CCL8P80075 99 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms