RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TMEM254Q8TBM7 123 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 C4orf3Q8WVX3 66 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 PSMF1Q92530 271 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 ZHX1-C8orf76Q96EF9 292 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 YPEL2Q96QA6 119 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 GPX7Q96SL4 187 aaPredicted RBP1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 SLC25A21Q9BQT8 299 aaPredicted RBP1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 OR2J1Q9GZK6 312 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 ATPIF1Q9UII2 106 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 ANK2Q01484 3957 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 NUP210LQ5VU65 1888 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 ATRQ13535 2644 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 LRBAP50851 2863 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 ANKRD36A6QL64 1941 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 RYR2Q92736 4967 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 ADGRG4Q8IZF6 3080 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 NBASA2RRP1 2371 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 F8P00451 2351 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 TRAV17A0A0B4J275 112 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 PPP5D1E7EU14 171 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 GPR31O00270 319 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 INE1O15225 51 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 GGCTO75223 188 aaKnown RBP1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 DHFRP00374 187 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 TRGC2P03986 189 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 CXCL1P09341 107 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 ZNF25P17030 456 aaPredicted RBP1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 CMPK1P30085 196 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 RPL22P35268 128 aaKnown RBP1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 BTG2P78543 158 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 PLGLB1Q02325 96 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 PRB3Q04118 309 aaPredicted RBP1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 MPV17LQ2QL34 196 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 SCGB2B2Q4G0G5 96 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 FAM24BQ8N5W8 94 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 CANT1Q8WVQ1 401 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 DYDC1Q8WWB3 177 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 GPER1Q99527 375 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 PBOV1Q9GZY1 135 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 BIRC6Q9NR09 4857 aa1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 GOLGA4Q13439 2230 aaKnown RBP1.12□□□□□ -2.23
SMCHD1-205ENST00000581383 KNL1Q8NG31 2342 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 CELSR1Q9NYQ6 3014 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 ANKHD1Q8IWZ3 2542 aaKnown RBP1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 K7ERJ3 54 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 DNAL4O96015 105 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 APOA2P02652 100 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 OGNP20774 298 aaKnown RBP1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 MSMO1Q15800 293 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 FAM74A1Q5RGS3 127 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 RPS27LQ71UM5 84 aaKnown RBP1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 BORCS5Q969J3 196 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 MALSU1Q96EH3 234 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 RMND5BQ96G75 393 aaPredicted RBP1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 ZC2HC1AQ96GY0 325 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 LINC00467Q9BRT7 94 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 TMEM70Q9BUB7 260 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 NPCDR1Q9BY65 106 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 SMPXQ9UHP9 88 aa1.11□□□□□ -2.23
SMCHD1-205ENST00000581383 HIVEP3Q5T1R4 2406 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 HEATR1Q9H583 2144 aaKnown RBP1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 UBR4Q5T4S7 5183 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 CCDC168Q8NDH2 2452 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 CRYBG3Q68DQ2 2970 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 PDZD2O15018 2839 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 NIPBLQ6KC79 2804 aaeCLIP1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 EPPK1P58107 5090 aaKnown RBP1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 A0A1B0GV72 72 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 TCRBV4S1A1TA0A5B7 111 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 MAP1LC3B2A6NCE7 125 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 A8MWV9 139 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 B4DSR2 109 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 H0YJX3 145 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 RPS3P23396 243 aaKnown RBP eCLIP1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 TMBIM6P55061 237 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 TFF3Q07654 80 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 SCIMPQ6UWF3 145 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 OR10K1Q8NGX5 313 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 PLEKHB2Q96CS7 222 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 CARD19Q96LW7 228 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 MAP1LC3BQ9GZQ8 125 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 TAS2R7Q9NYW3 318 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 MED11Q9P086 117 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 OR52A1Q9UKL2 312 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 MYO18AQ92614 2054 aaKnown RBP1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 HIVEP1P15822 2718 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 MYLKQ15746 1914 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 PCLOQ9Y6V0 5065 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 NBEAL1Q6ZS30 2694 aa1.1□□□□□ -2.23
SMCHD1-205ENST00000581383 ZNF469Q96JG9 3925 aaPredicted RBP1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 CELSR2Q9HCU4 2923 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 VPS13CQ709C8 3753 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 UQCRHLA0A096LP55 91 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 MIF4GDA9UHW6 222 aaKnown RBP1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 IFNA14P01570 189 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 MPC1LP0DKB6 136 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 SPRNQ5BIV9 151 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 TMEM78Q5T7P6 136 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 EIF5AL1Q6IS14 154 aaKnown RBP1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 PATE2Q6UY27 113 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 380.6 ms