RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 URGCP-MRPS24S4R325 110 aa6.95□□□□□ -1.3
RFFL-209ENST00000581265 H3BVH4 76 aa6.94□□□□□ -1.3
RFFL-209ENST00000581265 PEX7O00628 323 aa6.94□□□□□ -1.3
RFFL-209ENST00000581265 OXTP01178 125 aa6.94□□□□□ -1.3
RFFL-209ENST00000581265 ZNF726P1Q15940 193 aa6.94□□□□□ -1.3
RFFL-209ENST00000581265 Q5BKY6 102 aa6.94□□□□□ -1.3
RFFL-209ENST00000581265 ATRAIDQ6UW56 229 aa6.94□□□□□ -1.3
RFFL-209ENST00000581265 SFRP2Q96HF1 295 aa6.94□□□□□ -1.3
RFFL-209ENST00000581265 DNAJC30Q96LL9 226 aa6.94□□□□□ -1.3
RFFL-209ENST00000581265 CHCHD7Q9BUK0 85 aa6.94□□□□□ -1.3
RFFL-209ENST00000581265 KLK12Q9UKR0 248 aa6.94□□□□□ -1.3
RFFL-209ENST00000581265 HMCN2Q8NDA2 5059 aa6.94□□□□□ -1.3
RFFL-209ENST00000581265 IGKV2D-24A0A075B6R9 120 aa6.93□□□□□ -1.3
RFFL-209ENST00000581265 TRBV10-1A0A0K0K1A3 114 aa6.93□□□□□ -1.3
RFFL-209ENST00000581265 CTXND1A0A1B0GTU2 59 aa6.93□□□□□ -1.3
RFFL-209ENST00000581265 FAM74A7A6NL05 159 aa6.93□□□□□ -1.3
RFFL-209ENST00000581265 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
RFFL-209ENST00000581265 ELOBQ15370 118 aa6.93□□□□□ -1.3
RFFL-209ENST00000581265 RPL7L1Q6DKI1 246 aaKnown RBP6.93□□□□□ -1.3
RFFL-209ENST00000581265 Q86TA4 180 aa6.93□□□□□ -1.3
RFFL-209ENST00000581265 OR11H4Q8NGC9 324 aa6.93□□□□□ -1.3
RFFL-209ENST00000581265 ZC2HC1AQ96GY0 325 aa6.93□□□□□ -1.3
RFFL-209ENST00000581265 MED28Q9H204 178 aa6.93□□□□□ -1.3
RFFL-209ENST00000581265 PHLDA3Q9Y5J5 127 aa6.93□□□□□ -1.3
RFFL-209ENST00000581265 TRBV7-3A0A075B6L6 115 aa6.92□□□□□ -1.3
RFFL-209ENST00000581265 A0A087WWL8 130 aa6.92□□□□□ -1.3
RFFL-209ENST00000581265 A0A087WX48 190 aa6.92□□□□□ -1.3
RFFL-209ENST00000581265 GRIFINA4D1Z8 144 aa6.92□□□□□ -1.3
RFFL-209ENST00000581265 M0R036 132 aa6.92□□□□□ -1.3
RFFL-209ENST00000581265 SH2D1AO60880 128 aa6.92□□□□□ -1.3
RFFL-209ENST00000581265 UBE2G2P60604 165 aa6.92□□□□□ -1.3
RFFL-209ENST00000581265 ZNF674Q2M3X9 581 aa6.92□□□□□ -1.3
RFFL-209ENST00000581265 FAM162BQ5T6X4 162 aa6.92□□□□□ -1.3
RFFL-209ENST00000581265 FAM74A4Q5TZK3 123 aa6.92□□□□□ -1.3
RFFL-209ENST00000581265 INO80EQ8NBZ0 244 aaPredicted RBP6.92□□□□□ -1.3
RFFL-209ENST00000581265 UBE2WQ96B02 151 aa6.92□□□□□ -1.3
RFFL-209ENST00000581265 BORCS7-ASMTA0A0B4J1R7 106 aa6.91□□□□□ -1.3
RFFL-209ENST00000581265 TRBV6-1A0A0K0K1D8 114 aa6.91□□□□□ -1.3
RFFL-209ENST00000581265 GIPP09681 153 aaPredicted RBP6.91□□□□□ -1.3
RFFL-209ENST00000581265 TPT1P13693 172 aaKnown RBP6.91□□□□□ -1.3
RFFL-209ENST00000581265 UBE2D3P61077 147 aa6.91□□□□□ -1.3
RFFL-209ENST00000581265 UBE2D2P62837 147 aa6.91□□□□□ -1.3
RFFL-209ENST00000581265 RPL36AP83881 106 aaKnown RBP6.91□□□□□ -1.3
RFFL-209ENST00000581265 Q0VG73 95 aa6.91□□□□□ -1.3
RFFL-209ENST00000581265 LINC01559Q495D7 138 aa6.91□□□□□ -1.3
RFFL-209ENST00000581265 OR10G8Q8NGN5 311 aa6.91□□□□□ -1.3
RFFL-209ENST00000581265 CIRBP-AS1Q8TBR5 109 aa6.91□□□□□ -1.3
RFFL-209ENST00000581265 RPL36ALQ969Q0 106 aaKnown RBP6.91□□□□□ -1.3
RFFL-209ENST00000581265 M0R381 172 aa6.9□□□□□ -1.3
RFFL-209ENST00000581265 KCNIP4Q6PIL6 250 aa6.9□□□□□ -1.3
RFFL-209ENST00000581265 ZFP82Q8N141 532 aa6.9□□□□□ -1.3
RFFL-209ENST00000581265 FMC1Q96HJ9 113 aa6.9□□□□□ -1.3
RFFL-209ENST00000581265 TCEAL7Q9BRU2 100 aa6.9□□□□□ -1.3
RFFL-209ENST00000581265 TRBV6-8A0A0A6YYG3 113 aa6.89□□□□□ -1.31
RFFL-209ENST00000581265 TMEM262E9PQX1 116 aa6.89□□□□□ -1.31
RFFL-209ENST00000581265 PTTG1O95997 202 aa6.89□□□□□ -1.31
RFFL-209ENST00000581265 LTAP01374 205 aa6.89□□□□□ -1.31
RFFL-209ENST00000581265 IGLV2-8P01709 118 aa6.89□□□□□ -1.31
RFFL-209ENST00000581265 FHITP49789 147 aa6.89□□□□□ -1.31
RFFL-209ENST00000581265 UBE2G1P62253 170 aa6.89□□□□□ -1.31
RFFL-209ENST00000581265 C14orf177Q52M58 125 aa6.89□□□□□ -1.31
RFFL-209ENST00000581265 AKR1C8PQ5T2L2 129 aa6.89□□□□□ -1.31
RFFL-209ENST00000581265 ENHOQ6UWT2 76 aa6.89□□□□□ -1.31
RFFL-209ENST00000581265 TMSB15BA0A087X1C1 80 aa6.88□□□□□ -1.31
RFFL-209ENST00000581265 RAB4BP61018 213 aa6.88□□□□□ -1.31
RFFL-209ENST00000581265 PRR27Q6MZM9 219 aa6.88□□□□□ -1.31
RFFL-209ENST00000581265 C1orf43Q9BWL3 253 aa6.88□□□□□ -1.31
RFFL-209ENST00000581265 LRP1Q07954 4544 aaKnown RBP6.88□□□□□ -1.31
RFFL-209ENST00000581265 FXYD6-FXYD2A0A087WZ82 144 aa6.87□□□□□ -1.31
RFFL-209ENST00000581265 MAP1LC3B2A6NCE7 125 aa6.87□□□□□ -1.31
RFFL-209ENST00000581265 CST9LP1Q5W188 147 aa6.87□□□□□ -1.31
RFFL-209ENST00000581265 STOML3Q8TAV4 291 aa6.87□□□□□ -1.31
RFFL-209ENST00000581265 MAP1LC3BQ9GZQ8 125 aa6.87□□□□□ -1.31
RFFL-209ENST00000581265 MIAQ16674 131 aa6.86□□□□□ -1.31
RFFL-209ENST00000581265 MPV17L2Q567V2 206 aa6.86□□□□□ -1.31
RFFL-209ENST00000581265 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
RFFL-209ENST00000581265 C15orf54Q8N8G6 183 aa6.86□□□□□ -1.31
RFFL-209ENST00000581265 NEXN-AS1Q8NBZ9 246 aa6.86□□□□□ -1.31
RFFL-209ENST00000581265 SSBP4Q9BWG4 385 aaPredicted RBP6.86□□□□□ -1.31
RFFL-209ENST00000581265 CYTL1Q9NRR1 136 aa6.86□□□□□ -1.31
RFFL-209ENST00000581265 USP17L23D6RBM5 183 aa6.85□□□□□ -1.31
RFFL-209ENST00000581265 CRPP02741 224 aa6.85□□□□□ -1.31
RFFL-209ENST00000581265 S100A9P06702 114 aaKnown RBP6.85□□□□□ -1.31
RFFL-209ENST00000581265 CXCL1P09341 107 aa6.85□□□□□ -1.31
RFFL-209ENST00000581265 PKIAP61925 76 aa6.85□□□□□ -1.31
RFFL-209ENST00000581265 C9orf163Q8N9P6 203 aa6.85□□□□□ -1.31
RFFL-209ENST00000581265 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.85□□□□□ -1.31
RFFL-209ENST00000581265 OR10AG1Q8NH19 301 aa6.85□□□□□ -1.31
RFFL-209ENST00000581265 MLST8Q9BVC4 326 aa6.85□□□□□ -1.31
RFFL-209ENST00000581265 ZNF471Q9BX82 626 aaPredicted RBP6.85□□□□□ -1.31
RFFL-209ENST00000581265 PRR34Q9NV39 138 aa6.85□□□□□ -1.31
RFFL-209ENST00000581265 VAX2Q9UIW0 290 aa6.85□□□□□ -1.31
RFFL-209ENST00000581265 G3V3Q6 166 aa6.84□□□□□ -1.31
RFFL-209ENST00000581265 SNAI2O43623 268 aa6.84□□□□□ -1.31
RFFL-209ENST00000581265 PAGE4O60829 102 aa6.84□□□□□ -1.31
RFFL-209ENST00000581265 ANGP03950 147 aaKnown RBP6.84□□□□□ -1.31
RFFL-209ENST00000581265 PRSS1P07477 247 aa6.84□□□□□ -1.31
RFFL-209ENST00000581265 OR5AL1P0C617 328 aa6.84□□□□□ -1.31
RFFL-209ENST00000581265 AKR1C3P42330 323 aa6.84□□□□□ -1.31
RFFL-209ENST00000581265 ZNF56Q15929 161 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms