RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 DIRC1Q969H9 104 aa11.17□□□□□ -0.62
CSNK1D-217ENST00000581241 Q6ZUT4 128 aa11.17□□□□□ -0.62
CSNK1D-217ENST00000581241 TNRC6BQ9UPQ9 1833 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-217ENST00000581241 IGHV4OR15-8A0A075B7B6 117 aa11.16□□□□□ -0.62
CSNK1D-217ENST00000581241 A0A087WW49 117 aa11.16□□□□□ -0.62
CSNK1D-217ENST00000581241 PTH2Q96A98 100 aa11.16□□□□□ -0.62
CSNK1D-217ENST00000581241 CABIN1Q9Y6J0 2220 aa11.16□□□□□ -0.62
CSNK1D-217ENST00000581241 RP1P56715 2156 aa11.16□□□□□ -0.62
CSNK1D-217ENST00000581241 ESPL1Q14674 2120 aa11.15□□□□□ -0.62
CSNK1D-217ENST00000581241 RNF183Q96D59 192 aa11.15□□□□□ -0.62
CSNK1D-217ENST00000581241 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.62
CSNK1D-217ENST00000581241 SPART-AS1P0CW21 52 aa11.15□□□□□ -0.63
CSNK1D-217ENST00000581241 MIR7-3HGQ8N6C7 128 aa11.15□□□□□ -0.63
CSNK1D-217ENST00000581241 IGFL2Q6UWQ7 119 aa11.14□□□□□ -0.63
CSNK1D-217ENST00000581241 C14orf132Q9NPU4 83 aa11.14□□□□□ -0.63
CSNK1D-217ENST00000581241 HHLA3Q9XRX5 114 aa11.14□□□□□ -0.63
CSNK1D-217ENST00000581241 HEATR5AQ86XA9 2040 aa11.14□□□□□ -0.63
CSNK1D-217ENST00000581241 KIAA2026Q5HYC2 2103 aa11.14□□□□□ -0.63
CSNK1D-217ENST00000581241 PROP1O75360 226 aa11.14□□□□□ -0.63
CSNK1D-217ENST00000581241 NDUFV3P56181 108 aaKnown RBP11.14□□□□□ -0.63
CSNK1D-217ENST00000581241 E7EUB6 86 aa11.13□□□□□ -0.63
CSNK1D-217ENST00000581241 TRBV12-3P01733 135 aa11.13□□□□□ -0.63
CSNK1D-217ENST00000581241 PDE6GP18545 87 aa11.13□□□□□ -0.63
CSNK1D-217ENST00000581241 GRNP28799 593 aaKnown RBP11.13□□□□□ -0.63
CSNK1D-217ENST00000581241 MYO7BQ6PIF6 2116 aa11.13□□□□□ -0.63
CSNK1D-217ENST00000581241 IGLV2-8P01709 118 aa11.13□□□□□ -0.63
CSNK1D-217ENST00000581241 LOXL1Q08397 574 aaPredicted RBP11.13□□□□□ -0.63
CSNK1D-217ENST00000581241 C20orf203Q8NBC4 194 aa11.13□□□□□ -0.63
CSNK1D-217ENST00000581241 UPK3BQ9BT76 320 aa11.13□□□□□ -0.63
CSNK1D-217ENST00000581241 DENND4AQ7Z401 1863 aa11.13□□□□□ -0.63
CSNK1D-217ENST00000581241 OBSL1O75147 1896 aa11.13□□□□□ -0.63
CSNK1D-217ENST00000581241 FER1L5A0AVI2 2057 aa11.12□□□□□ -0.63
CSNK1D-217ENST00000581241 BRK1Q8WUW1 75 aa11.12□□□□□ -0.63
CSNK1D-217ENST00000581241 PIP4P1Q86T03 277 aa11.12□□□□□ -0.63
CSNK1D-217ENST00000581241 GPHB5Q86YW7 130 aa11.12□□□□□ -0.63
CSNK1D-217ENST00000581241 BLCAPP62952 87 aa11.12□□□□□ -0.63
CSNK1D-217ENST00000581241 SPANXB1Q9NS25 103 aaPredicted RBP11.12□□□□□ -0.63
CSNK1D-217ENST00000581241 IGHV4-61A0A0C4DH41 118 aa11.11□□□□□ -0.63
CSNK1D-217ENST00000581241 A0A0J9YXY3 114 aa11.11□□□□□ -0.63
CSNK1D-217ENST00000581241 MT-ATP8P03928 68 aa11.11□□□□□ -0.63
CSNK1D-217ENST00000581241 C4orf3Q8WVX3 66 aa11.11□□□□□ -0.63
CSNK1D-217ENST00000581241 TMEM89A2RUT3 159 aa11.11□□□□□ -0.63
CSNK1D-217ENST00000581241 GDF5OSQ5U4N7 250 aa11.11□□□□□ -0.63
CSNK1D-217ENST00000581241 SVILO95425 2214 aa11.11□□□□□ -0.63
CSNK1D-217ENST00000581241 IGKV1D-37A0A075B6S9 117 aa11.11□□□□□ -0.63
CSNK1D-217ENST00000581241 P0C879 139 aa11.1□□□□□ -0.63
CSNK1D-217ENST00000581241 COX7BP24311 80 aa11.1□□□□□ -0.63
CSNK1D-217ENST00000581241 Q8N7P7 452 aa11.1□□□□□ -0.63
CSNK1D-217ENST00000581241 UBE2AP49459 152 aa11.09□□□□□ -0.63
CSNK1D-217ENST00000581241 SPAG11BQ08648 103 aa11.09□□□□□ -0.63
CSNK1D-217ENST00000581241 IGHV4-30-2A0A087WSY4 118 aa11.09□□□□□ -0.63
CSNK1D-217ENST00000581241 IGLV1-47P01700 117 aa11.09□□□□□ -0.63
CSNK1D-217ENST00000581241 HEATR1Q9H583 2144 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-217ENST00000581241 UQCRQO14949 82 aa11.08□□□□□ -0.64
CSNK1D-217ENST00000581241 CCL18P55774 89 aa11.08□□□□□ -0.64
CSNK1D-217ENST00000581241 NEXN-AS1Q8NBZ9 246 aa11.08□□□□□ -0.64
CSNK1D-217ENST00000581241 TRAV23DV6A0A075B6W5 121 aa11.08□□□□□ -0.64
CSNK1D-217ENST00000581241 HIST2H2BDQ6DRA6 164 aa11.08□□□□□ -0.64
CSNK1D-217ENST00000581241 C3orf22Q8N5N4 141 aa11.08□□□□□ -0.64
CSNK1D-217ENST00000581241 DENND4CQ5VZ89 1909 aa11.07□□□□□ -0.64
CSNK1D-217ENST00000581241 ZNF80P51504 273 aaPredicted RBP11.07□□□□□ -0.64
CSNK1D-217ENST00000581241 LINC00322Q6ZN03 302 aaPredicted RBP11.07□□□□□ -0.64
CSNK1D-217ENST00000581241 F8W735 103 aaPredicted RBP11.07□□□□□ -0.64
CSNK1D-217ENST00000581241 DEFB113Q30KQ7 82 aa11.07□□□□□ -0.64
CSNK1D-217ENST00000581241 SEM1Q6ZVN7 128 aa11.07□□□□□ -0.64
CSNK1D-217ENST00000581241 TM2D2Q9BX73 214 aa11.07□□□□□ -0.64
CSNK1D-217ENST00000581241 DNAJC13O75165 2243 aa11.07□□□□□ -0.64
CSNK1D-217ENST00000581241 TMEM263Q8WUH6 116 aaKnown RBP11.06□□□□□ -0.64
CSNK1D-217ENST00000581241 A0A0J9YX75 114 aa11.06□□□□□ -0.64
CSNK1D-217ENST00000581241 TEX49A0A1B0GTD5 131 aa11.06□□□□□ -0.64
CSNK1D-217ENST00000581241 DEFB1P60022 68 aa11.06□□□□□ -0.64
CSNK1D-217ENST00000581241 TMEM223A0PJW6 202 aa11.06□□□□□ -0.64
CSNK1D-217ENST00000581241 CACNA1DQ01668 2161 aa11.06□□□□□ -0.64
CSNK1D-217ENST00000581241 COL4A3Q01955 1670 aa11.06□□□□□ -0.64
CSNK1D-217ENST00000581241 IGLC6P0CF74 106 aa11.06□□□□□ -0.64
CSNK1D-217ENST00000581241 C10orf105Q8TEF2 133 aa11.06□□□□□ -0.64
CSNK1D-217ENST00000581241 CEMP1Q6PRD7 247 aaPredicted RBP11.05□□□□□ -0.64
CSNK1D-217ENST00000581241 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
CSNK1D-217ENST00000581241 SDK2Q58EX2 2172 aa11.05□□□□□ -0.64
CSNK1D-217ENST00000581241 FAM236DA0A1B0GTK5 79 aa11.05□□□□□ -0.64
CSNK1D-217ENST00000581241 FAM236CP0DP71 79 aa11.05□□□□□ -0.64
CSNK1D-217ENST00000581241 EML6Q6ZMW3 1958 aa11.05□□□□□ -0.64
CSNK1D-217ENST00000581241 IGKV2D-26A0A0A0MRZ7 120 aa11.05□□□□□ -0.64
CSNK1D-217ENST00000581241 YPEL4Q96NS1 127 aa11.05□□□□□ -0.64
CSNK1D-217ENST00000581241 ZFP36P26651 326 aaKnown RBP11.05□□□□□ -0.64
CSNK1D-217ENST00000581241 SDIM1Q6ZPB5 146 aa11.05□□□□□ -0.64
CSNK1D-217ENST00000581241 FANCD2OSQ96PS1 177 aa11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 ODF3Q96PU9 254 aa11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 SIRPDQ9H106 197 aa11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 ESM1Q9NQ30 184 aa11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 ATP5EP2Q5VTU8 51 aa11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 TRBV10-1A0A0K0K1A3 114 aa11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 P0DMU3 169 aa11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 FAM231AP0DMU4 169 aa11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 FAM231CP0DMU5 169 aa11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 WT1P19544 449 aaPredicted RBP11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 UNQ9165/PRO28630Q6UXU0 137 aa11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 U3KQK5 164 aa11.04□□□□□ -0.64
CSNK1D-217ENST00000581241 IGF2-ASQ6U949 168 aa11.03□□□□□ -0.64
CSNK1D-217ENST00000581241 ZFAND2AQ8N6M9 145 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms