RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 SH2D1AO60880 128 aa8.32□□□□□ -1.08
SENP3-204ENST00000580997 LTAP01374 205 aa8.32□□□□□ -1.08
SENP3-204ENST00000580997 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
SENP3-204ENST00000580997 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
SENP3-204ENST00000580997 IGHV3-30-3P0DP02 117 aa8.32□□□□□ -1.08
SENP3-204ENST00000580997 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
SENP3-204ENST00000580997 FAM162BQ5T6X4 162 aa8.32□□□□□ -1.08
SENP3-204ENST00000580997 STOML3Q8TAV4 291 aa8.32□□□□□ -1.08
SENP3-204ENST00000580997 DNAH8Q96JB1 4490 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 A0A087WWC5 75 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 GAGE12JA6NER3 117 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 H3BVH4 76 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 RHODO00212 210 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 GAGE1Q13065 139 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 GAGE4Q13068 117 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 GAGE5Q13069 117 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 ZNF345Q14585 488 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 GAGE13Q4V321 117 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 KCNRGQ8N5I3 272 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 C14orf178Q8N769 122 aaPredicted RBP8.31□□□□□ -1.08
SENP3-204ENST00000580997 Q8N814 137 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 SYT8Q8NBV8 401 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 MBD3L1Q8WWY6 194 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 SFRP2Q96HF1 295 aa8.31□□□□□ -1.08
SENP3-204ENST00000580997 GRIFINA4D1Z8 144 aa8.3□□□□□ -1.08
SENP3-204ENST00000580997 HMSDA8MTL9 139 aa8.3□□□□□ -1.08
SENP3-204ENST00000580997 SMLR1H3BR10 107 aa8.3□□□□□ -1.08
SENP3-204ENST00000580997 M0R036 132 aa8.3□□□□□ -1.08
SENP3-204ENST00000580997 SEC11BP0C7V7 166 aa8.3□□□□□ -1.08
SENP3-204ENST00000580997 UBE2G1P62253 170 aa8.3□□□□□ -1.08
SENP3-204ENST00000580997 CST9LP1Q5W188 147 aa8.3□□□□□ -1.08
SENP3-204ENST00000580997 OR11H4Q8NGC9 324 aa8.3□□□□□ -1.08
SENP3-204ENST00000580997 Q9HAA7 133 aa8.3□□□□□ -1.08
SENP3-204ENST00000580997 HERC1Q15751 4861 aa8.3□□□□□ -1.08
SENP3-204ENST00000580997 SRRM2Q9UQ35 2752 aaKnown RBP8.3□□□□□ -1.08
SENP3-204ENST00000580997 IGLV5-52A0A0A0MRZ9 124 aa8.29□□□□□ -1.08
SENP3-204ENST00000580997 UMAD1C9J7I0 102 aa8.29□□□□□ -1.08
SENP3-204ENST00000580997 PAGE4O60829 102 aa8.29□□□□□ -1.08
SENP3-204ENST00000580997 MLST8Q9BVC4 326 aa8.29□□□□□ -1.08
SENP3-204ENST00000580997 TM2D2Q9BX73 214 aa8.29□□□□□ -1.08
SENP3-204ENST00000580997 PHLDA3Q9Y5J5 127 aa8.29□□□□□ -1.08
SENP3-204ENST00000580997 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
SENP3-204ENST00000580997 S100A9P06702 114 aaKnown RBP8.28□□□□□ -1.08
SENP3-204ENST00000580997 TPT1P13693 172 aaKnown RBP8.28□□□□□ -1.08
SENP3-204ENST00000580997 SFT2D1Q8WV19 159 aa8.28□□□□□ -1.08
SENP3-204ENST00000580997 TMEM70Q9BUB7 260 aa8.28□□□□□ -1.08
SENP3-204ENST00000580997 A0A087WWL8 130 aa8.27□□□□□ -1.09
SENP3-204ENST00000580997 A0A0D9SG52 128 aa8.27□□□□□ -1.09
SENP3-204ENST00000580997 TRBV10-1A0A0K0K1A3 114 aa8.27□□□□□ -1.09
SENP3-204ENST00000580997 AKR1C3P42330 323 aa8.27□□□□□ -1.09
SENP3-204ENST00000580997 TOR2AQ5JU69 321 aa8.27□□□□□ -1.09
SENP3-204ENST00000580997 FAM74A4Q5TZK3 123 aa8.27□□□□□ -1.09
SENP3-204ENST00000580997 Q5VSD8 79 aa8.27□□□□□ -1.09
SENP3-204ENST00000580997 DAZ4Q86SG3 579 aaKnown RBP8.27□□□□□ -1.09
SENP3-204ENST00000580997 ZFP82Q8N141 532 aa8.27□□□□□ -1.09
SENP3-204ENST00000580997 DAZ3Q9NR90 486 aaKnown RBP8.27□□□□□ -1.09
SENP3-204ENST00000580997 TMSB15BA0A087X1C1 80 aa8.26□□□□□ -1.09
SENP3-204ENST00000580997 M0R381 172 aa8.26□□□□□ -1.09
SENP3-204ENST00000580997 C1QBP02746 253 aa8.26□□□□□ -1.09
SENP3-204ENST00000580997 CXCL1P09341 107 aa8.26□□□□□ -1.09
SENP3-204ENST00000580997 KRTAP5-3Q6L8H2 238 aa8.26□□□□□ -1.09
SENP3-204ENST00000580997 NIT1Q86X76 327 aa8.26□□□□□ -1.09
SENP3-204ENST00000580997 FAM213BQ8TBF2 198 aa8.26□□□□□ -1.09
SENP3-204ENST00000580997 FRZBQ92765 325 aa8.26□□□□□ -1.09
SENP3-204ENST00000580997 MYCBP2O75592 4640 aa8.26□□□□□ -1.09
SENP3-204ENST00000580997 TRBV7-3A0A075B6L6 115 aa8.25□□□□□ -1.09
SENP3-204ENST00000580997 BCL2L11O43521 198 aa8.25□□□□□ -1.09
SENP3-204ENST00000580997 H2AFB1P0C5Y9 115 aa8.25□□□□□ -1.09
SENP3-204ENST00000580997 INAFM2P0DMQ5 153 aa8.25□□□□□ -1.09
SENP3-204ENST00000580997 WFDC2Q14508 124 aa8.25□□□□□ -1.09
SENP3-204ENST00000580997 OR10G8Q8NGN5 311 aa8.25□□□□□ -1.09
SENP3-204ENST00000580997 SSBP4Q9BWG4 385 aaPredicted RBP8.25□□□□□ -1.09
SENP3-204ENST00000580997 COX11Q9Y6N1 276 aa8.25□□□□□ -1.09
SENP3-204ENST00000580997 KANTRA0A1W2PQU2 76 aa8.24□□□□□ -1.09
SENP3-204ENST00000580997 SMR3BP02814 79 aaPredicted RBP8.24□□□□□ -1.09
SENP3-204ENST00000580997 RAB4BP61018 213 aa8.24□□□□□ -1.09
SENP3-204ENST00000580997 UBE2D3P61077 147 aa8.24□□□□□ -1.09
SENP3-204ENST00000580997 UBE2D2P62837 147 aa8.24□□□□□ -1.09
SENP3-204ENST00000580997 TMUB2Q71RG4 321 aa8.24□□□□□ -1.09
SENP3-204ENST00000580997 BAGE2Q86Y30 109 aa8.24□□□□□ -1.09
SENP3-204ENST00000580997 CHCHD7Q9BUK0 85 aa8.24□□□□□ -1.09
SENP3-204ENST00000580997 ZNF471Q9BX82 626 aaPredicted RBP8.24□□□□□ -1.09
SENP3-204ENST00000580997 FAM30AQ9NZY2 134 aa8.24□□□□□ -1.09
SENP3-204ENST00000580997 SNAI2O43623 268 aa8.23□□□□□ -1.09
SENP3-204ENST00000580997 PFDN1O60925 122 aa8.23□□□□□ -1.09
SENP3-204ENST00000580997 OR5AL1P0C617 328 aa8.23□□□□□ -1.09
SENP3-204ENST00000580997 EIF5AP63241 154 aaKnown RBP8.23□□□□□ -1.09
SENP3-204ENST00000580997 RPL36AP83881 106 aaKnown RBP8.23□□□□□ -1.09
SENP3-204ENST00000580997 RPL19P84098 196 aaKnown RBP8.23□□□□□ -1.09
SENP3-204ENST00000580997 PRR27Q6MZM9 219 aa8.23□□□□□ -1.09
SENP3-204ENST00000580997 Q6ZSA8 131 aa8.23□□□□□ -1.09
SENP3-204ENST00000580997 RPL36ALQ969Q0 106 aaKnown RBP8.23□□□□□ -1.09
SENP3-204ENST00000580997 URGCP-MRPS24S4R325 110 aa8.23□□□□□ -1.09
SENP3-204ENST00000580997 TRAV1-1A0A0B4J248 108 aa8.22□□□□□ -1.09
SENP3-204ENST00000580997 A0A1B0GV50 99 aa8.22□□□□□ -1.09
SENP3-204ENST00000580997 FAM229AH3BQW9 127 aa8.22□□□□□ -1.09
SENP3-204ENST00000580997 ATRAIDQ6UW56 229 aa8.22□□□□□ -1.09
SENP3-204ENST00000580997 OR10AG1Q8NH19 301 aa8.22□□□□□ -1.09
SENP3-204ENST00000580997 RPL35P42766 123 aaKnown RBP8.21□□□□□ -1.1
SENP3-204ENST00000580997 CCL20P78556 96 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms