RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 SERF1AO75920 110 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 GAS8-AS1O95177 125 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 S100A8P05109 93 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 SRIP30626 198 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 ASIPP42127 132 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 TDRG1Q3Y452 100 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 PDZD11Q5EBL8 140 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 FAM104BQ5XKR9 115 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 TRPT1Q86TN4 253 aaKnown RBP4.54□□□□□ -1.68
PTPRM-213ENST00000580949 AMN1Q8IY45 258 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 WFDC9Q8NEX5 89 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 C18orf32Q8TCD1 76 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 RNF185Q96GF1 192 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 URB1-AS1Q96HZ7 61 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 MDFICQ9P1T7 246 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 TIMM8BQ9Y5J9 83 aaPredicted RBP4.54□□□□□ -1.68
PTPRM-213ENST00000580949 IGHV1OR15-1A0A075B7D0 117 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 SMKR1H3BMG3 65 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 NXPH4O95158 308 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 AMBPP02760 352 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 RAB4AP20338 218 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 EVI2AP22794 236 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 AKR1D1P51857 326 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 CMC4P56277 68 aaPredicted RBP4.53□□□□□ -1.68
PTPRM-213ENST00000580949 CACNG7P62955 275 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 MRPL51Q4U2R6 128 aaKnown RBP4.53□□□□□ -1.68
PTPRM-213ENST00000580949 FAM159AQ6UWV7 190 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 BAGE3Q86Y29 109 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 BORCS7Q96B45 105 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 KCNS1Q96KK3 526 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 C9orf85Q96MD7 179 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 RCHY1Q96PM5 261 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 HIST1H2BLQ99880 126 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 FAM110AQ9BQ89 295 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 TMEM191AQ9H0A3 160 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 XCL2Q9UBD3 114 aa4.53□□□□□ -1.68
PTPRM-213ENST00000580949 STAB1Q9NY15 2570 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 D6R8Y8 96 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 M0R381 172 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 ESDP10768 282 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 IGLL1P15814 213 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 GATA1P15976 413 aaPredicted RBP4.52□□□□□ -1.69
PTPRM-213ENST00000580949 S100A4P26447 101 aaKnown RBP4.52□□□□□ -1.69
PTPRM-213ENST00000580949 LINC00315P59091 139 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 OR10J3Q5JRS4 329 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 C9orf66Q5T8R8 295 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 SPANXN1Q5VSR9 72 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 NIT1Q86X76 327 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 STHQ8IWL8 128 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 C1orf158Q8N1D5 194 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 DEFB125Q8N687 156 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 JPT2Q9H910 190 aa4.52□□□□□ -1.69
PTPRM-213ENST00000580949 CBY3A6NI87 242 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 A8MZ25 164 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 NCR2O95944 276 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 FABP4P15090 132 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 RPL35AP18077 110 aaKnown RBP4.51□□□□□ -1.69
PTPRM-213ENST00000580949 AZU1P20160 251 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 INSL3P51460 131 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 C14orf178Q8N769 122 aaPredicted RBP4.51□□□□□ -1.69
PTPRM-213ENST00000580949 OR10D4PQ8NGN7 298 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 PRELID3AQ96N28 172 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 LINC01587Q99440 93 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 LINC00467Q9BRT7 94 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 PHLDA3Q9Y5J5 127 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 KIF25-AS1Q9Y6Z4 181 aa4.51□□□□□ -1.69
PTPRM-213ENST00000580949 COL6A5A8TX70 2615 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 TRAV26-2A0A0B4J265 109 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 NPYP01303 97 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 INSP01308 110 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 HTN1P15515 57 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 S100A2P29034 98 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 CKS2P33552 79 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 LINC00518Q8N0U6 118 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 ORMDL3Q8N138 153 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 FAM19A2Q8N3H0 131 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 POM121L12Q8N7R1 296 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 C3orf56Q8N813 242 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 NRACQ8N912 160 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 C11orf72Q8NBR9 251 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 CSNK1G2-AS1Q8NCQ2 148 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 SAMD10Q9BYL1 202 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 GSN-AS1Q9NRJ2 163 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 MUC4Q99102 2169 aa4.5□□□□□ -1.69
PTPRM-213ENST00000580949 LOC389332A0A1B0GUA5 103 aa4.49□□□□□ -1.69
PTPRM-213ENST00000580949 CRYGDP07320 174 aa4.49□□□□□ -1.69
PTPRM-213ENST00000580949 PYY3Q5JQD4 70 aa4.49□□□□□ -1.69
PTPRM-213ENST00000580949 RNASEKQ6P5S7 137 aaKnown RBP4.49□□□□□ -1.69
PTPRM-213ENST00000580949 TMEM18Q96B42 140 aa4.49□□□□□ -1.69
PTPRM-213ENST00000580949 PACRGQ96M98 296 aaPredicted RBP4.49□□□□□ -1.69
PTPRM-213ENST00000580949 C20orf144Q9BQM9 153 aa4.49□□□□□ -1.69
PTPRM-213ENST00000580949 MCRIP2Q9BUT9 160 aaKnown RBP4.49□□□□□ -1.69
PTPRM-213ENST00000580949 IGHV3OR16-12A0A075B7B8 117 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 PPBPP02775 128 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 LINC00614P0C842 121 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 PMCHP20382 165 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 IFI27P40305 119 aaPredicted RBP4.48□□□□□ -1.69
PTPRM-213ENST00000580949 KRTAP10-11P60412 298 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 NUTF2P61970 127 aaKnown RBP4.48□□□□□ -1.69
PTPRM-213ENST00000580949 PMCHL1Q16048 86 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms