RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 CTDSP2O14595 271 aa8.31□□□□□ -1.08
CSNK1D-213ENST00000580446 TAS2R30P59541 319 aa8.31□□□□□ -1.08
CSNK1D-213ENST00000580446 MRPS10P82664 201 aaKnown RBP8.31□□□□□ -1.08
CSNK1D-213ENST00000580446 IL18Q14116 193 aa8.31□□□□□ -1.08
CSNK1D-213ENST00000580446 IAH1Q2TAA2 248 aaPredicted RBP8.31□□□□□ -1.08
CSNK1D-213ENST00000580446 NEXN-AS1Q8NBZ9 246 aa8.31□□□□□ -1.08
CSNK1D-213ENST00000580446 CMTM2Q8TAZ6 248 aa8.31□□□□□ -1.08
CSNK1D-213ENST00000580446 IGKV3D-20A0A0C4DH25 116 aa8.3□□□□□ -1.08
CSNK1D-213ENST00000580446 IGKV3OR2-268A0A0C4DH90 116 aa8.3□□□□□ -1.08
CSNK1D-213ENST00000580446 RGS5O15539 181 aa8.3□□□□□ -1.08
CSNK1D-213ENST00000580446 CTF1Q16619 201 aa8.3□□□□□ -1.08
CSNK1D-213ENST00000580446 LINC00474Q9P2X8 69 aa8.3□□□□□ -1.08
CSNK1D-213ENST00000580446 L7N2F9 121 aa8.29□□□□□ -1.08
CSNK1D-213ENST00000580446 CRYGAP11844 174 aa8.29□□□□□ -1.08
CSNK1D-213ENST00000580446 AMTP48728 403 aa8.29□□□□□ -1.08
CSNK1D-213ENST00000580446 VAMP2P63027 116 aa8.29□□□□□ -1.08
CSNK1D-213ENST00000580446 GAGE2BQ13066 116 aa8.29□□□□□ -1.08
CSNK1D-213ENST00000580446 SPANXN2Q5MJ10 180 aa8.29□□□□□ -1.08
CSNK1D-213ENST00000580446 KRTAP11-1Q8IUC1 163 aa8.29□□□□□ -1.08
CSNK1D-213ENST00000580446 THAP6Q8TBB0 222 aa8.29□□□□□ -1.08
CSNK1D-213ENST00000580446 TRIM63Q969Q1 353 aa8.29□□□□□ -1.08
CSNK1D-213ENST00000580446 LSM5Q9Y4Y9 91 aaKnown RBP8.29□□□□□ -1.08
CSNK1D-213ENST00000580446 TRAV8-4A0A0B4J246 113 aa8.28□□□□□ -1.08
CSNK1D-213ENST00000580446 TRBV10-1A0A0K0K1A3 114 aa8.28□□□□□ -1.08
CSNK1D-213ENST00000580446 M0R381 172 aa8.28□□□□□ -1.08
CSNK1D-213ENST00000580446 P01737 135 aa8.28□□□□□ -1.08
CSNK1D-213ENST00000580446 RAB2AP61019 212 aa8.28□□□□□ -1.08
CSNK1D-213ENST00000580446 PKIAP61925 76 aa8.28□□□□□ -1.08
CSNK1D-213ENST00000580446 AP3S1Q92572 193 aa8.28□□□□□ -1.08
CSNK1D-213ENST00000580446 FUNDC2Q9BWH2 189 aa8.28□□□□□ -1.08
CSNK1D-213ENST00000580446 NPCDR1Q9BY65 106 aa8.28□□□□□ -1.08
CSNK1D-213ENST00000580446 C9orf170A2RU37 121 aa8.27□□□□□ -1.09
CSNK1D-213ENST00000580446 GRIFINA4D1Z8 144 aa8.27□□□□□ -1.09
CSNK1D-213ENST00000580446 OR10G8Q8NGN5 311 aa8.27□□□□□ -1.09
CSNK1D-213ENST00000580446 SFRP2Q96HF1 295 aa8.27□□□□□ -1.09
CSNK1D-213ENST00000580446 DERL1Q9BUN8 251 aa8.27□□□□□ -1.09
CSNK1D-213ENST00000580446 NAA50Q9GZZ1 169 aaKnown RBP8.27□□□□□ -1.09
CSNK1D-213ENST00000580446 OTORQ9NRC9 128 aa8.27□□□□□ -1.09
CSNK1D-213ENST00000580446 PHLDA3Q9Y5J5 127 aa8.27□□□□□ -1.09
CSNK1D-213ENST00000580446 IGSF23A1L1A6 192 aa8.26□□□□□ -1.09
CSNK1D-213ENST00000580446 RPL13AP40429 203 aaKnown RBP8.26□□□□□ -1.09
CSNK1D-213ENST00000580446 CFAP161Q6P656 301 aa8.26□□□□□ -1.09
CSNK1D-213ENST00000580446 OR11H4Q8NGC9 324 aa8.26□□□□□ -1.09
CSNK1D-213ENST00000580446 NDFIP1Q9BT67 221 aa8.26□□□□□ -1.09
CSNK1D-213ENST00000580446 VCX3BQ9H321 246 aa8.26□□□□□ -1.09
CSNK1D-213ENST00000580446 OR5AC2Q9NZP5 309 aa8.26□□□□□ -1.09
CSNK1D-213ENST00000580446 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
CSNK1D-213ENST00000580446 ARMS2P0C7Q2 107 aa8.25□□□□□ -1.09
CSNK1D-213ENST00000580446 SULT1A2P50226 295 aa8.25□□□□□ -1.09
CSNK1D-213ENST00000580446 PTTG1IPP53801 180 aa8.25□□□□□ -1.09
CSNK1D-213ENST00000580446 EIF5AP63241 154 aaKnown RBP8.25□□□□□ -1.09
CSNK1D-213ENST00000580446 PIK3CD-AS1Q5SR53 167 aa8.25□□□□□ -1.09
CSNK1D-213ENST00000580446 LCE2CQ5TA81 110 aa8.25□□□□□ -1.09
CSNK1D-213ENST00000580446 M0R036 132 aa8.24□□□□□ -1.09
CSNK1D-213ENST00000580446 ZNF56Q15929 161 aa8.24□□□□□ -1.09
CSNK1D-213ENST00000580446 C9orf116Q5BN46 136 aaPredicted RBP8.24□□□□□ -1.09
CSNK1D-213ENST00000580446 MITD1Q8WV92 249 aa8.24□□□□□ -1.09
CSNK1D-213ENST00000580446 CARD19Q96LW7 228 aa8.24□□□□□ -1.09
CSNK1D-213ENST00000580446 TRBV25-1A0A075B6N4 114 aa8.23□□□□□ -1.09
CSNK1D-213ENST00000580446 A0A087WZ39 114 aa8.23□□□□□ -1.09
CSNK1D-213ENST00000580446 GZMBP10144 247 aa8.23□□□□□ -1.09
CSNK1D-213ENST00000580446 DEFA3P59666 94 aa8.23□□□□□ -1.09
CSNK1D-213ENST00000580446 TPRXLQ17RH7 258 aa8.23□□□□□ -1.09
CSNK1D-213ENST00000580446 PRNTQ86SH4 94 aa8.23□□□□□ -1.09
CSNK1D-213ENST00000580446 SDHCQ99643 169 aaPredicted RBP8.23□□□□□ -1.09
CSNK1D-213ENST00000580446 IL36BQ9NZH7 164 aa8.23□□□□□ -1.09
CSNK1D-213ENST00000580446 MBD2Q9UBB5 411 aa8.23□□□□□ -1.09
CSNK1D-213ENST00000580446 IGLV7-46A0A075B6I9 117 aa8.22□□□□□ -1.09
CSNK1D-213ENST00000580446 TRBV6-1A0A0K0K1D8 114 aa8.22□□□□□ -1.09
CSNK1D-213ENST00000580446 SMUG1Q53HV7 270 aa8.22□□□□□ -1.09
CSNK1D-213ENST00000580446 LYRM2Q9NU23 88 aaPredicted RBP8.22□□□□□ -1.09
CSNK1D-213ENST00000580446 FLVCR2Q9UPI3 526 aa8.22□□□□□ -1.09
CSNK1D-213ENST00000580446 PSG8Q9UQ74 426 aa8.22□□□□□ -1.09
CSNK1D-213ENST00000580446 BCL2P10415 239 aa8.21□□□□□ -1.1
CSNK1D-213ENST00000580446 SULT1A1P50225 295 aa8.21□□□□□ -1.1
CSNK1D-213ENST00000580446 C11orf1Q9H5F2 150 aa8.21□□□□□ -1.1
CSNK1D-213ENST00000580446 TMSB15BA0A087X1C1 80 aa8.2□□□□□ -1.1
CSNK1D-213ENST00000580446 B4DEV8 164 aa8.2□□□□□ -1.1
CSNK1D-213ENST00000580446 MT1HP80294 61 aa8.2□□□□□ -1.1
CSNK1D-213ENST00000580446 ZFP69Q49AA0 526 aa8.2□□□□□ -1.1
CSNK1D-213ENST00000580446 AQP10Q96PS8 301 aa8.2□□□□□ -1.1
CSNK1D-213ENST00000580446 MLST8Q9BVC4 326 aa8.2□□□□□ -1.1
CSNK1D-213ENST00000580446 IGHV1-24A0A0C4DH33 117 aa8.19□□□□□ -1.1
CSNK1D-213ENST00000580446 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
CSNK1D-213ENST00000580446 S100A11P31949 105 aa8.19□□□□□ -1.1
CSNK1D-213ENST00000580446 IQCJQ1A5X6 159 aa8.19□□□□□ -1.1
CSNK1D-213ENST00000580446 FAM74A1Q5RGS3 127 aa8.19□□□□□ -1.1
CSNK1D-213ENST00000580446 A0A087X002 238 aa8.18□□□□□ -1.1
CSNK1D-213ENST00000580446 FAM25EA8MYX2 175 aa8.18□□□□□ -1.1
CSNK1D-213ENST00000580446 FAUP35544 74 aaKnown RBP8.18□□□□□ -1.1
CSNK1D-213ENST00000580446 KHDC3LQ587J8 217 aa8.18□□□□□ -1.1
CSNK1D-213ENST00000580446 TMEM252Q8N6L7 170 aa8.18□□□□□ -1.1
CSNK1D-213ENST00000580446 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.18□□□□□ -1.1
CSNK1D-213ENST00000580446 CHCHD10Q8WYQ3 142 aaPredicted RBP8.18□□□□□ -1.1
CSNK1D-213ENST00000580446 SLC25A21Q9BQT8 299 aaPredicted RBP8.18□□□□□ -1.1
CSNK1D-213ENST00000580446 HMGB3O15347 200 aaKnown RBP8.17□□□□□ -1.1
CSNK1D-213ENST00000580446 RAB4BP61018 213 aa8.17□□□□□ -1.1
CSNK1D-213ENST00000580446 FLI1Q01543 452 aaPredicted RBP8.17□□□□□ -1.1
CSNK1D-213ENST00000580446 KRBOX1C9JBD0 128 aa8.16□□□□□ -1.1
CSNK1D-213ENST00000580446 F5H697 171 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms