RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CEBPGP53567 150 aa9.09□□□□□ -0.95
TRAF4-214ENST00000580073 DNLZQ5SXM8 178 aa9.09□□□□□ -0.95
TRAF4-214ENST00000580073 RASL10AQ92737 203 aa9.09□□□□□ -0.95
TRAF4-214ENST00000580073 K7EQD1 137 aa9.08□□□□□ -0.96
TRAF4-214ENST00000580073 PSCAO43653 123 aa9.08□□□□□ -0.96
TRAF4-214ENST00000580073 GYPEP15421 78 aa9.08□□□□□ -0.96
TRAF4-214ENST00000580073 FHL2Q14192 279 aa9.08□□□□□ -0.96
TRAF4-214ENST00000580073 CLLU1Q5K131 121 aa9.08□□□□□ -0.96
TRAF4-214ENST00000580073 NTN5Q8WTR8 489 aaPredicted RBP9.08□□□□□ -0.96
TRAF4-214ENST00000580073 DMBT1Q9UGM3 2413 aaPredicted RBP9.07□□□□□ -0.96
TRAF4-214ENST00000580073 TRAV4A0A0B4J268 109 aa9.07□□□□□ -0.96
TRAF4-214ENST00000580073 FAM229AH3BQW9 127 aa9.07□□□□□ -0.96
TRAF4-214ENST00000580073 H3BVH4 76 aa9.07□□□□□ -0.96
TRAF4-214ENST00000580073 M0R2P5 195 aa9.07□□□□□ -0.96
TRAF4-214ENST00000580073 CRYGDP07320 174 aa9.07□□□□□ -0.96
TRAF4-214ENST00000580073 SFTA3P0C7M3 94 aa9.07□□□□□ -0.96
TRAF4-214ENST00000580073 ARMS2P0C7Q2 107 aa9.07□□□□□ -0.96
TRAF4-214ENST00000580073 DNAH10OSP0CZ25 163 aa9.07□□□□□ -0.96
TRAF4-214ENST00000580073 GZMBP10144 247 aa9.07□□□□□ -0.96
TRAF4-214ENST00000580073 GCSHP23434 173 aa9.07□□□□□ -0.96
TRAF4-214ENST00000580073 ZNF479Q96JC4 524 aa9.07□□□□□ -0.96
TRAF4-214ENST00000580073 ASIPP42127 132 aa9.06□□□□□ -0.96
TRAF4-214ENST00000580073 WFDC10BQ8IUB3 73 aa9.06□□□□□ -0.96
TRAF4-214ENST00000580073 NUDT10Q8NFP7 164 aa9.06□□□□□ -0.96
TRAF4-214ENST00000580073 SMIM12Q96EX1 92 aa9.06□□□□□ -0.96
TRAF4-214ENST00000580073 NUDT11Q96G61 164 aa9.06□□□□□ -0.96
TRAF4-214ENST00000580073 TMEM70Q9BUB7 260 aa9.06□□□□□ -0.96
TRAF4-214ENST00000580073 RNASE7Q9H1E1 156 aaKnown RBP9.06□□□□□ -0.96
TRAF4-214ENST00000580073 JPT2Q9H910 190 aa9.06□□□□□ -0.96
TRAF4-214ENST00000580073 XGP55808 180 aa9.05□□□□□ -0.96
TRAF4-214ENST00000580073 TIRAPP58753 221 aa9.05□□□□□ -0.96
TRAF4-214ENST00000580073 PEA15Q15121 130 aa9.05□□□□□ -0.96
TRAF4-214ENST00000580073 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
TRAF4-214ENST00000580073 OR4C5Q8NGB2 326 aa9.05□□□□□ -0.96
TRAF4-214ENST00000580073 PTH2Q96A98 100 aa9.05□□□□□ -0.96
TRAF4-214ENST00000580073 SMIM7Q9BQ49 75 aa9.05□□□□□ -0.96
TRAF4-214ENST00000580073 IL36BQ9NZH7 164 aa9.05□□□□□ -0.96
TRAF4-214ENST00000580073 IGLV5-52A0A0A0MRZ9 124 aa9.04□□□□□ -0.96
TRAF4-214ENST00000580073 MUC21A0A0G2JKD1 596 aa9.04□□□□□ -0.96
TRAF4-214ENST00000580073 MUC21A0A140T8X8 626 aa9.04□□□□□ -0.96
TRAF4-214ENST00000580073 ZNF727A8MUV8 499 aa9.04□□□□□ -0.96
TRAF4-214ENST00000580073 RAB14P61106 215 aa9.04□□□□□ -0.96
TRAF4-214ENST00000580073 ZNF876PQ49A33 203 aa9.04□□□□□ -0.96
TRAF4-214ENST00000580073 Q6ZSN1 163 aa9.04□□□□□ -0.96
TRAF4-214ENST00000580073 LINC01551Q86U37 167 aa9.04□□□□□ -0.96
TRAF4-214ENST00000580073 SSBP4Q9BWG4 385 aaPredicted RBP9.04□□□□□ -0.96
TRAF4-214ENST00000580073 TRAV8-6A0A0B4J262 113 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 IGHV3-38A0A0C4DH36 116 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 RS1O15537 224 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 SNAI2O43623 268 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 CIDEAO60543 219 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 CXCL1P09341 107 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 IGLC6P0CF74 106 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 S100A4P26447 101 aaKnown RBP9.03□□□□□ -0.96
TRAF4-214ENST00000580073 KRTAP10-1P60331 282 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 CFAP126Q5VTH2 177 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 OR2D3Q8NGH3 330 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 SAMD10Q9BYL1 202 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 TNFRSF18Q9Y5U5 241 aa9.03□□□□□ -0.96
TRAF4-214ENST00000580073 RPL23P62829 140 aaKnown RBP9.02□□□□□ -0.97
TRAF4-214ENST00000580073 LINC01556Q5JQF7 62 aa9.02□□□□□ -0.97
TRAF4-214ENST00000580073 UFSP1Q6NVU6 142 aa9.02□□□□□ -0.97
TRAF4-214ENST00000580073 OR10AG1Q8NH19 301 aa9.02□□□□□ -0.97
TRAF4-214ENST00000580073 SMDT1Q9H4I9 107 aa9.02□□□□□ -0.97
TRAF4-214ENST00000580073 IGHV3-73A0A0B4J1V6 119 aa9.01□□□□□ -0.97
TRAF4-214ENST00000580073 P01737 135 aa9.01□□□□□ -0.97
TRAF4-214ENST00000580073 FUSP35637 526 aaKnown RBP eCLIP9.01□□□□□ -0.97
TRAF4-214ENST00000580073 TMEM241Q24JQ0 296 aa9.01□□□□□ -0.97
TRAF4-214ENST00000580073 FAM231DQ6ZW35 169 aa9.01□□□□□ -0.97
TRAF4-214ENST00000580073 DAZAP1Q96EP5 407 aaKnown RBP9.01□□□□□ -0.97
TRAF4-214ENST00000580073 PRADC1Q9BSG0 188 aa9.01□□□□□ -0.97
TRAF4-214ENST00000580073 OR5AL1P0C617 328 aa9□□□□□ -0.97
TRAF4-214ENST00000580073 LAGE3Q14657 143 aa9□□□□□ -0.97
TRAF4-214ENST00000580073 RHOHQ15669 191 aa9□□□□□ -0.97
TRAF4-214ENST00000580073 FAM74A3Q4VXF1 159 aa9□□□□□ -0.97
TRAF4-214ENST00000580073 OR10J3Q5JRS4 329 aa9□□□□□ -0.97
TRAF4-214ENST00000580073 GTSF1Q8WW33 167 aa9□□□□□ -0.97
TRAF4-214ENST00000580073 ISOC2Q96AB3 205 aa9□□□□□ -0.97
TRAF4-214ENST00000580073 RPP21Q9H633 154 aaKnown RBP9□□□□□ -0.97
TRAF4-214ENST00000580073 LOC100131303A0A0U1RQF7 123 aa8.99□□□□□ -0.97
TRAF4-214ENST00000580073 M0R381 172 aa8.99□□□□□ -0.97
TRAF4-214ENST00000580073 GATA1P15976 413 aaPredicted RBP8.99□□□□□ -0.97
TRAF4-214ENST00000580073 SSTP61278 116 aa8.99□□□□□ -0.97
TRAF4-214ENST00000580073 SFRP2Q96HF1 295 aa8.99□□□□□ -0.97
TRAF4-214ENST00000580073 TM2D2Q9BX73 214 aa8.99□□□□□ -0.97
TRAF4-214ENST00000580073 BIN3Q9NQY0 253 aa8.99□□□□□ -0.97
TRAF4-214ENST00000580073 Q9UF83 564 aa8.99□□□□□ -0.97
TRAF4-214ENST00000580073 NAT8Q9UHE5 227 aa8.99□□□□□ -0.97
TRAF4-214ENST00000580073 PHLDA3Q9Y5J5 127 aa8.99□□□□□ -0.97
TRAF4-214ENST00000580073 HERC1Q15751 4861 aa8.99□□□□□ -0.97
TRAF4-214ENST00000580073 IBA57-AS1B1ANH7 110 aa8.98□□□□□ -0.97
TRAF4-214ENST00000580073 GATCO43716 136 aaKnown RBP8.98□□□□□ -0.97
TRAF4-214ENST00000580073 ADCYAP1P18509 176 aa8.98□□□□□ -0.97
TRAF4-214ENST00000580073 RPS20P60866 119 aaKnown RBP8.98□□□□□ -0.97
TRAF4-214ENST00000580073 PIK3CD-AS1Q5SR53 167 aa8.98□□□□□ -0.97
TRAF4-214ENST00000580073 LYZL1Q6UWQ5 148 aa8.98□□□□□ -0.97
TRAF4-214ENST00000580073 Q8N814 137 aa8.98□□□□□ -0.97
TRAF4-214ENST00000580073 FER1L6-AS1Q8NA97 138 aa8.98□□□□□ -0.97
TRAF4-214ENST00000580073 V9GYV3 84 aa8.98□□□□□ -0.97
TRAF4-214ENST00000580073 A0A087WWL8 130 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms