RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 IGKV1-33P01594 117 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 RPL28P46779 137 aaKnown RBP4.45□□□□□ -1.7
COPS3-216ENST00000579716 PLGLAQ15195 96 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 CASC2Q6XLA1 102 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 FAM19A2Q8N3H0 131 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 ZNF355PQ9NSJ1 428 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 ABRACLQ9P1F3 81 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 LOC285556D6RIA3 1793 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 FAM208AQ9UK61 1670 aaKnown RBP4.45□□□□□ -1.7
COPS3-216ENST00000579716 TJP1Q07157 1748 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 FMN2Q9NZ56 1722 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 ARHGAP21Q5T5U3 1957 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 TRBV25-1A0A075B6N4 114 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 IGHV3-73A0A0B4J1V6 119 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 TRBV10-2A0A0K0K1G8 114 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 H3BVH4 76 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 COX6CP09669 75 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 ATP5EP2Q5VTU8 51 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 Q6JHZ5 121 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 NDUFA11Q86Y39 141 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 MED12LQ86YW9 2145 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 Q8IYB0 196 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 C20orf197Q8N268 126 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 Q8N6K4 173 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 Q8NBF4 154 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 RPP21Q9H633 154 aaKnown RBP4.44□□□□□ -1.7
COPS3-216ENST00000579716 ERCC6L2Q5T890 1561 aa4.44□□□□□ -1.7
COPS3-216ENST00000579716 TOP2BQ02880 1626 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 C5P01031 1676 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 C5orf67F2Z3F1 127 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 IGHV1-46P01743 117 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 CRPP02741 224 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 TRGV3P03979 118 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 IGHV4-34P06331 123 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 CD24P25063 80 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 ROMO1P60602 79 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 Q8NDZ9 215 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 LINC00574Q9H8X3 128 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 TANC2Q9HCD6 1990 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 TRPM6Q9BX84 2022 aa4.43□□□□□ -1.7
COPS3-216ENST00000579716 SLIT2O94813 1529 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 DOCK7Q96N67 2140 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 IGHV1-3A0A0C4DH29 117 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 A0A1B0GVX0 72 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 HCRTO43612 131 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 LEPROTL1O95214 131 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 IFI27P40305 119 aaPredicted RBP4.42□□□□□ -1.7
COPS3-216ENST00000579716 ATXN8Q156A1 80 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 NCBP2-AS2Q69YL0 99 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 ZNF818PQ6ZRF7 136 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 PKD1L3Q7Z443 1732 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 ZNF525Q8N782 197 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 C20orf203Q8NBC4 194 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 LIMD2Q9BT23 127 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 CMC2Q9NRP2 79 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 PHRF1Q9P1Y6 1649 aaKnown RBP4.42□□□□□ -1.7
COPS3-216ENST00000579716 THADAQ6YHU6 1953 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 TCF20Q9UGU0 1960 aaKnown RBP4.42□□□□□ -1.7
COPS3-216ENST00000579716 TSC2P49815 1807 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 SLX4Q8IY92 1834 aa4.42□□□□□ -1.7
COPS3-216ENST00000579716 C3P01024 1663 aa4.41□□□□□ -1.7
COPS3-216ENST00000579716 TULP4Q9NRJ4 1543 aa4.41□□□□□ -1.7
COPS3-216ENST00000579716 ABCC8Q09428 1581 aa4.41□□□□□ -1.7
COPS3-216ENST00000579716 MIFP14174 115 aa4.41□□□□□ -1.7
COPS3-216ENST00000579716 EDDM3BP56851 147 aa4.41□□□□□ -1.7
COPS3-216ENST00000579716 C15orf32Q32M92 178 aa4.41□□□□□ -1.7
COPS3-216ENST00000579716 TMEM190Q8WZ59 177 aa4.41□□□□□ -1.7
COPS3-216ENST00000579716 C14orf132Q9NPU4 83 aa4.41□□□□□ -1.7
COPS3-216ENST00000579716 TIMM9Q9Y5J7 89 aa4.41□□□□□ -1.7
COPS3-216ENST00000579716 DSCAMO60469 2012 aa4.41□□□□□ -1.7
COPS3-216ENST00000579716 SNRNP200O75643 2136 aaKnown RBP4.4□□□□□ -1.7
COPS3-216ENST00000579716 PAPPAQ13219 1627 aa4.4□□□□□ -1.7
COPS3-216ENST00000579716 IGHV3-15A0A0B4J1V0 119 aa4.4□□□□□ -1.71
COPS3-216ENST00000579716 A6NDX4 124 aa4.4□□□□□ -1.71
COPS3-216ENST00000579716 F8WEM9 126 aa4.4□□□□□ -1.71
COPS3-216ENST00000579716 ERC2-IT1O76042 136 aa4.4□□□□□ -1.71
COPS3-216ENST00000579716 C1orf134Q5TEV5 83 aa4.4□□□□□ -1.71
COPS3-216ENST00000579716 Q8N9W7 124 aa4.4□□□□□ -1.71
COPS3-216ENST00000579716 ZFC3H1O60293 1989 aaKnown RBP4.4□□□□□ -1.71
COPS3-216ENST00000579716 NHSQ6T4R5 1651 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 TMSB15BA0A087X1C1 80 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 IGLV3-32A0A0A0MS00 114 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 TRAV22A0A0B4J277 110 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 TMEM223A0PJW6 202 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 TMEM30CPA0ZSE6 113 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 FAM223BA6NKX1 122 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 PMS2P5A8MQ11 134 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 B4DSR2 109 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 C9orf47Q6ZRZ4 202 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 BPESC1Q9GZL8 116 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 KDM6BO15054 1643 aa4.39□□□□□ -1.71
COPS3-216ENST00000579716 LAMB2P55268 1798 aa4.38□□□□□ -1.71
COPS3-216ENST00000579716 ZNF815PA8K554 130 aa4.38□□□□□ -1.71
COPS3-216ENST00000579716 LYZP61626 148 aa4.38□□□□□ -1.71
COPS3-216ENST00000579716 RPL36AP83881 106 aaKnown RBP4.38□□□□□ -1.71
COPS3-216ENST00000579716 Q6ZTC4 211 aa4.38□□□□□ -1.71
COPS3-216ENST00000579716 LYZL2Q7Z4W2 148 aa4.38□□□□□ -1.71
COPS3-216ENST00000579716 CLECL1Q8IZS7 167 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms