RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 DUX3Q96PT4 197 aa5.31□□□□□ -1.56
KRT39-203ENST00000578078 TTTY13Q9BZ97 58 aa5.31□□□□□ -1.56
KRT39-203ENST00000578078 ATRXP46100 2492 aa5.3□□□□□ -1.56
KRT39-203ENST00000578078 CHD8Q9HCK8 2581 aa5.3□□□□□ -1.56
KRT39-203ENST00000578078 ATOX1O00244 68 aa5.3□□□□□ -1.56
KRT39-203ENST00000578078 ENSAO43768 121 aaKnown RBP5.3□□□□□ -1.56
KRT39-203ENST00000578078 EGR2P11161 476 aaPredicted RBP5.3□□□□□ -1.56
KRT39-203ENST00000578078 HERVK_113P61574 105 aa5.3□□□□□ -1.56
KRT39-203ENST00000578078 ZNF415Q09FC8 603 aa5.3□□□□□ -1.56
KRT39-203ENST00000578078 LINC01620Q4KN68 170 aa5.3□□□□□ -1.56
KRT39-203ENST00000578078 ORMDL2Q53FV1 153 aa5.3□□□□□ -1.56
KRT39-203ENST00000578078 LYZL1Q6UWQ5 148 aa5.3□□□□□ -1.56
KRT39-203ENST00000578078 Q6ZQT7 251 aa5.3□□□□□ -1.56
KRT39-203ENST00000578078 LINC00643Q86TS7 51 aa5.3□□□□□ -1.56
KRT39-203ENST00000578078 SMG1Q96Q15 3661 aaKnown RBP5.29□□□□□ -1.56
KRT39-203ENST00000578078 NDUFC2-KCTD14E9PQ53 114 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 H3BVH4 76 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 IGLV1-47P01700 117 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 GNLYP22749 145 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 COX7A1P24310 79 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 SCGB1D4Q6XE38 83 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 Q6ZSN1 163 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 PRNTQ86SH4 94 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 SLC25A29Q8N8R3 303 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 NTN5Q8WTR8 489 aaPredicted RBP5.29□□□□□ -1.56
KRT39-203ENST00000578078 ITLN2Q8WWU7 325 aaPredicted RBP5.29□□□□□ -1.56
KRT39-203ENST00000578078 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 COL6A6A6NMZ7 2263 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 HRNRQ86YZ3 2850 aaPredicted RBP5.29□□□□□ -1.56
KRT39-203ENST00000578078 AGRNO00468 2067 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 NCOR2Q9Y618 2525 aa5.29□□□□□ -1.56
KRT39-203ENST00000578078 IGHV1-3A0A0C4DH29 117 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 A0A0J9YY99 117 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 ZNF815PA8K554 130 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 BUB1B-PAK6H3BSN5 160 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 M0R1W7 72 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 LY6HO94772 140 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 IGLV2-23P01705 113 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 CFC1BP0CG36 223 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 CFC1P0CG37 223 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 CNTFRP26992 372 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 GOLT1AQ6ZVE7 132 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 LY6G5BQ8NDX9 201 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 RNF185Q96GF1 192 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 BBC3Q96PG8 261 aaPredicted RBP5.28□□□□□ -1.56
KRT39-203ENST00000578078 TNCP24821 2201 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 TRBV19A0A075B6N1 114 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 FAM236AA0A1B0GUQ0 79 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 FAM236BA0A1B0GV22 79 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 IGHV3-30P01768 117 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 IGHV3-30-5P0DP03 117 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 HIST1H4AP62805 103 aaKnown RBP5.28□□□□□ -1.56
KRT39-203ENST00000578078 NEXN-AS1Q8NBZ9 246 aa5.28□□□□□ -1.56
KRT39-203ENST00000578078 HIVEP3Q5T1R4 2406 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 MALRD1Q5VYJ5 2156 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 CACNA1BQ00975 2339 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 IGHV3-72A0A0B4J1Y9 119 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 IGHV1-69DA0A0B4J2H0 117 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 OVOL1O14753 267 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 PPP1R17O96001 155 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 IGHV3-33P01772 117 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 RPL27AP46776 148 aaKnown RBP5.27□□□□□ -1.57
KRT39-203ENST00000578078 EFNA4P52798 201 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 C5orf38Q86SI9 138 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 TOMM6Q96B49 74 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 RNF5Q99942 180 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 CHCHD5Q9BSY4 110 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 DCHS2Q6V1P9 2916 aa5.27□□□□□ -1.57
KRT39-203ENST00000578078 ABCA4P78363 2273 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 NBASA2RRP1 2371 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 TPRP12270 2363 aaKnown RBP5.26□□□□□ -1.57
KRT39-203ENST00000578078 A0A0J9YX75 114 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 LY6LH3BQJ8 138 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 NBR2O15453 112 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 TRACP01848 142 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 COX6CP09669 75 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 CRIP1P50238 77 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 SLURP1P55000 103 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 DLX1P56177 255 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 WT1-ASQ06250 92 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 ASPHD1Q5U4P2 390 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 TRPT1Q86TN4 253 aaKnown RBP5.26□□□□□ -1.57
KRT39-203ENST00000578078 METTL26Q96S19 204 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 DPM3Q9P2X0 92 aa5.26□□□□□ -1.57
KRT39-203ENST00000578078 IGHV4-4A0A075B6R2 117 aa5.25□□□□□ -1.57
KRT39-203ENST00000578078 A0A1W2PPR1 153 aa5.25□□□□□ -1.57
KRT39-203ENST00000578078 OOSP1A8MZH6 123 aa5.25□□□□□ -1.57
KRT39-203ENST00000578078 E7EUB6 86 aa5.25□□□□□ -1.57
KRT39-203ENST00000578078 PRB3Q04118 309 aaPredicted RBP5.25□□□□□ -1.57
KRT39-203ENST00000578078 C10orf55Q5SWW7 151 aa5.25□□□□□ -1.57
KRT39-203ENST00000578078 DPH3Q96FX2 82 aa5.25□□□□□ -1.57
KRT39-203ENST00000578078 ZNF256Q9Y2P7 627 aaPredicted RBP5.25□□□□□ -1.57
KRT39-203ENST00000578078 TMSB15BA0A087X1C1 80 aa5.24□□□□□ -1.57
KRT39-203ENST00000578078 LOC107984640A0A0U1RRK4 108 aa5.24□□□□□ -1.57
KRT39-203ENST00000578078 RBAKDNA6NC62 111 aa5.24□□□□□ -1.57
KRT39-203ENST00000578078 SDHAF1A6NFY7 115 aa5.24□□□□□ -1.57
KRT39-203ENST00000578078 C11orf86A6NJI1 115 aa5.24□□□□□ -1.57
KRT39-203ENST00000578078 ODF3BA8MYP8 253 aa5.24□□□□□ -1.57
KRT39-203ENST00000578078 C19orf84I3L1E1 186 aa5.24□□□□□ -1.57
KRT39-203ENST00000578078 CCL24O00175 119 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms