RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 JPT2Q9H910 190 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 HLA-DQA1P01909 254 aa7.24□□□□□ -1.25
CRLF3-202ENST00000577725 APCSP02743 223 aa7.24□□□□□ -1.25
CRLF3-202ENST00000577725 APOC4P55056 127 aa7.24□□□□□ -1.25
CRLF3-202ENST00000577725 ZNF705AQ6ZN79 300 aaPredicted RBP7.24□□□□□ -1.25
CRLF3-202ENST00000577725 CNFNQ9BYD5 112 aa7.24□□□□□ -1.25
CRLF3-202ENST00000577725 RETNQ9HD89 108 aa7.24□□□□□ -1.25
CRLF3-202ENST00000577725 MRPL16Q9NX20 251 aaKnown RBP7.24□□□□□ -1.25
CRLF3-202ENST00000577725 HERC1Q15751 4861 aa7.24□□□□□ -1.25
CRLF3-202ENST00000577725 KIR2DL5BA0A0G2JN68 375 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 KIR2DL5BA0A0G2JPC4 375 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 SMKR1H3BMG3 65 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 NXPH4O95158 308 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 TRGC1P0CF51 173 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 EVI2AP22794 236 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 COX19Q49B96 90 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 RASL11AQ6T310 242 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 AMN1Q8IY45 258 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 KIR2DL5AQ8N109 375 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 GATD1Q8NB37 220 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 KIR2DL5BQ8NHK3 375 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 LINC00476Q8WZB0 136 aa7.23□□□□□ -1.25
CRLF3-202ENST00000577725 IGHV4-4A0A075B6R2 117 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 A0A087WWL8 130 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 A0A1B0GW15 77 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 NCR2O95944 276 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 MT-ND6P03923 174 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 S100A8P05109 93 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 MGPP08493 103 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 EMP1P54849 157 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 RAB5BP61020 215 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 RRN3P1Q2M238 152 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 C14orf178Q8N769 122 aaPredicted RBP7.22□□□□□ -1.25
CRLF3-202ENST00000577725 RNASE8Q8TDE3 154 aaKnown RBP7.22□□□□□ -1.25
CRLF3-202ENST00000577725 RNF185Q96GF1 192 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 X6R8D5 127 aa7.22□□□□□ -1.25
CRLF3-202ENST00000577725 PLAC8L1A1L4L8 177 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 HIST1H2BKO60814 126 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 GAS8-AS1O95177 125 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 HIST1H2BJP06899 126 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 HIST1H2BOP23527 126 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 SRIP30626 198 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 HIST1H2BBP33778 126 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 HIST1H2BDP58876 126 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 HIST1H2BCP62807 126 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 HIST2H2BEQ16778 126 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 IQCJQ1A5X6 159 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 MRPL51Q4U2R6 128 aaKnown RBP7.21□□□□□ -1.26
CRLF3-202ENST00000577725 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.21□□□□□ -1.26
CRLF3-202ENST00000577725 FAM104BQ5XKR9 115 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 ZNF493Q6ZR52 646 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 SYT8Q8NBV8 401 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 IL17DQ8TAD2 202 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 TMEM263Q8WUH6 116 aaKnown RBP7.21□□□□□ -1.26
CRLF3-202ENST00000577725 HIST1H2BHQ93079 126 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 HIST1H2BNQ99877 126 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 HIST1H2BMQ99879 126 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 SAMD10Q9BYL1 202 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 KRTAP4-5Q9BYR2 181 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 TMEM191AQ9H0A3 160 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 NOP10Q9NPE3 64 aaKnown RBP7.21□□□□□ -1.26
CRLF3-202ENST00000577725 NACAE9PAV3 2078 aa7.21□□□□□ -1.26
CRLF3-202ENST00000577725 TRGV1A0A0A0MS02 117 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 IGHV3-73A0A0B4J1V6 119 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 TRAV26-2A0A0B4J265 109 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 M0R2P5 195 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 UBE2CO00762 179 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 DEFB4AO15263 64 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 LY6G6CO95867 125 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 GATA1P15976 413 aaPredicted RBP7.2□□□□□ -1.26
CRLF3-202ENST00000577725 RAB4AP20338 218 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 ZNF876PQ49A33 203 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 SMIM15Q7Z3B0 74 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 OR11H2Q8NH07 326 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 C16orf74Q96GX8 76 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 AP1S3Q96PC3 154 aa7.2□□□□□ -1.26
CRLF3-202ENST00000577725 A8MZ25 164 aa7.19□□□□□ -1.26
CRLF3-202ENST00000577725 D6R8Y8 96 aa7.19□□□□□ -1.26
CRLF3-202ENST00000577725 NDUFA6P56556 154 aa7.19□□□□□ -1.26
CRLF3-202ENST00000577725 FAM74A4Q5TZK3 123 aa7.19□□□□□ -1.26
CRLF3-202ENST00000577725 Q6ZTI0 123 aa7.19□□□□□ -1.26
CRLF3-202ENST00000577725 RNF183Q96D59 192 aa7.19□□□□□ -1.26
CRLF3-202ENST00000577725 SPXQ9BT56 116 aa7.19□□□□□ -1.26
CRLF3-202ENST00000577725 DPH3P1Q9H4G8 78 aa7.19□□□□□ -1.26
CRLF3-202ENST00000577725 KIF25-AS1Q9Y6Z4 181 aa7.19□□□□□ -1.26
CRLF3-202ENST00000577725 IGHV4-28A0A0C4DH34 117 aa7.18□□□□□ -1.26
CRLF3-202ENST00000577725 GAGE12BA1L429 117 aa7.18□□□□□ -1.26
CRLF3-202ENST00000577725 GAGE7O76087 117 aa7.18□□□□□ -1.26
CRLF3-202ENST00000577725 IGHV3-53P01767 116 aa7.18□□□□□ -1.26
CRLF3-202ENST00000577725 CRYGDP07320 174 aa7.18□□□□□ -1.26
CRLF3-202ENST00000577725 GAGE12FP0CL80 117 aa7.18□□□□□ -1.26
CRLF3-202ENST00000577725 GAGE12GP0CL81 117 aa7.18□□□□□ -1.26
CRLF3-202ENST00000577725 GAGE12IP0CL82 117 aa7.18□□□□□ -1.26
CRLF3-202ENST00000577725 SMIM17P0DL12 118 aa7.18□□□□□ -1.26
CRLF3-202ENST00000577725 OVOL2Q9BRP0 275 aa7.18□□□□□ -1.26
CRLF3-202ENST00000577725 ALKBH7Q9BT30 221 aaPredicted RBP7.18□□□□□ -1.26
CRLF3-202ENST00000577725 NPYP01303 97 aa7.17□□□□□ -1.26
CRLF3-202ENST00000577725 CKS2P33552 79 aa7.17□□□□□ -1.26
CRLF3-202ENST00000577725 LINC00315P59091 139 aa7.17□□□□□ -1.26
CRLF3-202ENST00000577725 ZNF56Q15929 161 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms