RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 TMEM262E9PQX1 116 aa10.46□□□□□ -0.73
RNF43-202ENST00000577625 GAGE7O76087 117 aa10.46□□□□□ -0.73
RNF43-202ENST00000577625 GAGE12FP0CL80 117 aa10.46□□□□□ -0.73
RNF43-202ENST00000577625 GAGE12GP0CL81 117 aa10.46□□□□□ -0.73
RNF43-202ENST00000577625 GAGE12IP0CL82 117 aa10.46□□□□□ -0.73
RNF43-202ENST00000577625 SRD5A1P18405 259 aa10.46□□□□□ -0.73
RNF43-202ENST00000577625 GAGE4Q13068 117 aa10.46□□□□□ -0.73
RNF43-202ENST00000577625 Q71RC1 249 aaPredicted RBP10.46□□□□□ -0.73
RNF43-202ENST00000577625 TMEM86BQ8N661 226 aa10.46□□□□□ -0.73
RNF43-202ENST00000577625 TMEM158Q8WZ71 300 aa10.46□□□□□ -0.73
RNF43-202ENST00000577625 CITED1Q99966 193 aa10.46□□□□□ -0.73
RNF43-202ENST00000577625 NF1P21359 2839 aa10.46□□□□□ -0.73
RNF43-202ENST00000577625 HLA-DMBP28068 263 aa10.46□□□□□ -0.74
RNF43-202ENST00000577625 HIST1H4GQ99525 98 aa10.46□□□□□ -0.74
RNF43-202ENST00000577625 SPANXA1Q9NS26 97 aa10.46□□□□□ -0.74
RNF43-202ENST00000577625 LINC01619G3V211 115 aa10.45□□□□□ -0.74
RNF43-202ENST00000577625 IGFL4Q6B9Z1 124 aa10.45□□□□□ -0.74
RNF43-202ENST00000577625 GTSCR1Q86UQ5 136 aa10.45□□□□□ -0.74
RNF43-202ENST00000577625 TEN1Q86WV5 123 aa10.45□□□□□ -0.74
RNF43-202ENST00000577625 MYOZ3Q8TDC0 251 aa10.45□□□□□ -0.74
RNF43-202ENST00000577625 YAE1D1Q9NRH1 226 aa10.45□□□□□ -0.74
RNF43-202ENST00000577625 IGKV2-40A0A087WW87 121 aaPredicted RBP10.45□□□□□ -0.74
RNF43-202ENST00000577625 DPM2O94777 84 aa10.45□□□□□ -0.74
RNF43-202ENST00000577625 IGKV2D-40P01614 121 aaPredicted RBP10.45□□□□□ -0.74
RNF43-202ENST00000577625 TWIST1Q15672 202 aa10.45□□□□□ -0.74
RNF43-202ENST00000577625 ZC2HC1BQ5TFG8 222 aa10.45□□□□□ -0.74
RNF43-202ENST00000577625 COX8CQ7Z4L0 72 aa10.45□□□□□ -0.74
RNF43-202ENST00000577625 CARD19Q96LW7 228 aa10.45□□□□□ -0.74
RNF43-202ENST00000577625 DNAJC9-AS1A6NH13 148 aa10.44□□□□□ -0.74
RNF43-202ENST00000577625 RHODO00212 210 aa10.44□□□□□ -0.74
RNF43-202ENST00000577625 ELANEP08246 267 aa10.44□□□□□ -0.74
RNF43-202ENST00000577625 ZNF688P0C7X2 276 aa10.44□□□□□ -0.74
RNF43-202ENST00000577625 MORN3Q6PF18 240 aaPredicted RBP10.44□□□□□ -0.74
RNF43-202ENST00000577625 WFDC3Q8IUB2 231 aa10.44□□□□□ -0.74
RNF43-202ENST00000577625 AMN1Q8IY45 258 aa10.44□□□□□ -0.74
RNF43-202ENST00000577625 MRPL53Q96EL3 112 aaKnown RBP10.44□□□□□ -0.74
RNF43-202ENST00000577625 ANK3Q12955 4377 aaKnown RBP10.44□□□□□ -0.74
RNF43-202ENST00000577625 TRBV7-3A0A075B6L6 115 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 LINC01546A6NGU7 62 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 FABP5P3A8MUU1 101 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 ATP5LO75964 103 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 MRPL51Q4U2R6 128 aaKnown RBP10.43□□□□□ -0.74
RNF43-202ENST00000577625 RNF152Q8N8N0 203 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 ASCL2Q99929 193 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 TRAV8-2A0A0B4J237 113 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 RBAKDNA6NC62 111 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 PRSS1P07477 247 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 NDUFV3P56181 108 aaKnown RBP10.43□□□□□ -0.74
RNF43-202ENST00000577625 C8orf49Q96NF6 230 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 PRR25Q96S07 402 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 TPPP3Q9BW30 176 aa10.43□□□□□ -0.74
RNF43-202ENST00000577625 OTOGQ6ZRI0 2925 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 CRIP1P50238 77 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 GPHB5Q86YW7 130 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 RNF182Q8N6D2 247 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 MAPKAPK5-AS1Q8N8E1 139 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 DAZ1Q9NQZ3 744 aaKnown RBP10.42□□□□□ -0.74
RNF43-202ENST00000577625 HIVEP2P31629 2446 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 AGRNO00468 2067 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 K7EMT4 169 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 NPYP01303 97 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 FCER1GP30273 86 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 CKS2P33552 79 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 ESM1Q9NQ30 184 aa10.42□□□□□ -0.74
RNF43-202ENST00000577625 IGHV7-4-1A0A0J9YVY3 117 aa10.41□□□□□ -0.74
RNF43-202ENST00000577625 LYRM7Q5U5X0 104 aa10.41□□□□□ -0.74
RNF43-202ENST00000577625 SETD2Q9BYW2 2564 aaPredicted RBP10.41□□□□□ -0.74
RNF43-202ENST00000577625 A0A087WX48 190 aa10.41□□□□□ -0.74
RNF43-202ENST00000577625 PRAC2D3DTV9 90 aa10.41□□□□□ -0.74
RNF43-202ENST00000577625 LGALS1P09382 135 aaKnown RBP10.41□□□□□ -0.74
RNF43-202ENST00000577625 GAGE2BQ13066 116 aa10.41□□□□□ -0.74
RNF43-202ENST00000577625 GAGE2EQ4V326 116 aa10.41□□□□□ -0.74
RNF43-202ENST00000577625 GAGE2DQ9UEU5 116 aa10.41□□□□□ -0.74
RNF43-202ENST00000577625 TMEM213A2RRL7 107 aa10.4□□□□□ -0.74
RNF43-202ENST00000577625 CCDC179H3BU77 68 aa10.4□□□□□ -0.74
RNF43-202ENST00000577625 LEPP41159 167 aa10.4□□□□□ -0.74
RNF43-202ENST00000577625 PSMB2P49721 201 aa10.4□□□□□ -0.74
RNF43-202ENST00000577625 Q8TAT8 98 aa10.4□□□□□ -0.74
RNF43-202ENST00000577625 UBE2E2Q96LR5 201 aa10.4□□□□□ -0.74
RNF43-202ENST00000577625 MAP1LC3AQ9H492 121 aa10.4□□□□□ -0.74
RNF43-202ENST00000577625 LYZL1Q6UWQ5 148 aa10.39□□□□□ -0.75
RNF43-202ENST00000577625 Q6ZSV7 163 aa10.39□□□□□ -0.75
RNF43-202ENST00000577625 SBSPONQ8IVN8 264 aa10.39□□□□□ -0.75
RNF43-202ENST00000577625 PTH2Q96A98 100 aa10.39□□□□□ -0.75
RNF43-202ENST00000577625 C16orf92Q96LL3 132 aa10.39□□□□□ -0.75
RNF43-202ENST00000577625 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
RNF43-202ENST00000577625 J3KRW8 73 aa10.39□□□□□ -0.75
RNF43-202ENST00000577625 SOCS3O14543 225 aa10.39□□□□□ -0.75
RNF43-202ENST00000577625 EDN2P20800 178 aa10.39□□□□□ -0.75
RNF43-202ENST00000577625 CUBNO60494 3623 aa10.39□□□□□ -0.75
RNF43-202ENST00000577625 SH2D1AO60880 128 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 IFITM1P13164 125 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 ASIPP42127 132 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 ERCC8Q13216 396 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 TTC32Q5I0X7 151 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 Q6Q795 121 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 SMR3AQ99954 134 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 TMEM160Q9NX00 188 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 IGHV4OR15-8A0A075B7B6 117 aa10.38□□□□□ -0.75
RNF43-202ENST00000577625 A0A087WW49 117 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms