RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 DPH3P1Q9H4G8 78 aa11.8□□□□□ -0.52
ERCC4-208ENST00000576348 NBEAL2Q6ZNJ1 2754 aa11.79□□□□□ -0.52
ERCC4-208ENST00000576348 A0A0J9YWU9 116 aa11.79□□□□□ -0.52
ERCC4-208ENST00000576348 F5H697 171 aa11.79□□□□□ -0.52
ERCC4-208ENST00000576348 RHODO00212 210 aa11.79□□□□□ -0.52
ERCC4-208ENST00000576348 APCSP02743 223 aa11.79□□□□□ -0.52
ERCC4-208ENST00000576348 EVI2AP22794 236 aa11.79□□□□□ -0.52
ERCC4-208ENST00000576348 GNB1LQ9BYB4 327 aa11.79□□□□□ -0.52
ERCC4-208ENST00000576348 DKK2Q9UBU2 259 aa11.79□□□□□ -0.52
ERCC4-208ENST00000576348 TRAPPC1Q9Y5R8 145 aa11.79□□□□□ -0.52
ERCC4-208ENST00000576348 DNHD1Q96M86 4753 aa11.78□□□□□ -0.52
ERCC4-208ENST00000576348 RS1O15537 224 aa11.78□□□□□ -0.52
ERCC4-208ENST00000576348 ZNF56Q15929 161 aa11.78□□□□□ -0.52
ERCC4-208ENST00000576348 CFAP126Q5VTH2 177 aa11.78□□□□□ -0.52
ERCC4-208ENST00000576348 TMEM136Q6ZRR5 245 aa11.78□□□□□ -0.52
ERCC4-208ENST00000576348 JPT2Q9H910 190 aa11.78□□□□□ -0.52
ERCC4-208ENST00000576348 TRAV4A0A0B4J268 109 aa11.77□□□□□ -0.53
ERCC4-208ENST00000576348 IGHV3-53P01767 116 aa11.77□□□□□ -0.53
ERCC4-208ENST00000576348 FABP9Q0Z7S8 132 aa11.77□□□□□ -0.53
ERCC4-208ENST00000576348 AMN1Q8IY45 258 aa11.77□□□□□ -0.53
ERCC4-208ENST00000576348 MRPL18Q9H0U6 180 aaKnown RBP11.77□□□□□ -0.53
ERCC4-208ENST00000576348 IGHV3-73A0A0B4J1V6 119 aa11.76□□□□□ -0.53
ERCC4-208ENST00000576348 FAM104BQ5XKR9 115 aa11.76□□□□□ -0.53
ERCC4-208ENST00000576348 GATD1Q8NB37 220 aa11.76□□□□□ -0.53
ERCC4-208ENST00000576348 SAMD10Q9BYL1 202 aa11.76□□□□□ -0.53
ERCC4-208ENST00000576348 CELA1Q9UNI1 258 aa11.76□□□□□ -0.53
ERCC4-208ENST00000576348 MEGF8Q7Z7M0 2845 aa11.75□□□□□ -0.53
ERCC4-208ENST00000576348 TRGV4A0A0C4DH28 118 aa11.74□□□□□ -0.53
ERCC4-208ENST00000576348 CIDEAO60543 219 aa11.74□□□□□ -0.53
ERCC4-208ENST00000576348 CRYGDP07320 174 aa11.74□□□□□ -0.53
ERCC4-208ENST00000576348 ZFP2Q6ZN57 461 aa11.74□□□□□ -0.53
ERCC4-208ENST00000576348 LINC00612Q8N6U2 182 aa11.74□□□□□ -0.53
ERCC4-208ENST00000576348 C11orf45Q8TAV5 145 aa11.74□□□□□ -0.53
ERCC4-208ENST00000576348 H7C1H1 209 aa11.73□□□□□ -0.53
ERCC4-208ENST00000576348 ATP5G1P05496 136 aa11.73□□□□□ -0.53
ERCC4-208ENST00000576348 HTN3P15516 51 aa11.73□□□□□ -0.53
ERCC4-208ENST00000576348 RAB4AP20338 218 aa11.73□□□□□ -0.53
ERCC4-208ENST00000576348 CKS2P33552 79 aa11.73□□□□□ -0.53
ERCC4-208ENST00000576348 SLAQ13239 276 aa11.73□□□□□ -0.53
ERCC4-208ENST00000576348 MRPL51Q4U2R6 128 aaKnown RBP11.73□□□□□ -0.53
ERCC4-208ENST00000576348 MRAP2Q96G30 205 aa11.73□□□□□ -0.53
ERCC4-208ENST00000576348 ZNF479Q96JC4 524 aa11.73□□□□□ -0.53
ERCC4-208ENST00000576348 KIF25-AS1Q9Y6Z4 181 aa11.73□□□□□ -0.53
ERCC4-208ENST00000576348 TRGC2P03986 189 aa11.72□□□□□ -0.53
ERCC4-208ENST00000576348 RNF185Q96GF1 192 aa11.72□□□□□ -0.53
ERCC4-208ENST00000576348 C18orf15Q96N68 181 aa11.72□□□□□ -0.53
ERCC4-208ENST00000576348 PPBPP02775 128 aa11.71□□□□□ -0.53
ERCC4-208ENST00000576348 KIAA1644Q3SXP7 199 aa11.71□□□□□ -0.53
ERCC4-208ENST00000576348 ORMDL3Q8N138 153 aa11.71□□□□□ -0.53
ERCC4-208ENST00000576348 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.53
ERCC4-208ENST00000576348 U3KQK5 164 aa11.71□□□□□ -0.53
ERCC4-208ENST00000576348 TRAV26-2A0A0B4J265 109 aa11.7□□□□□ -0.54
ERCC4-208ENST00000576348 D6R8Y8 96 aa11.7□□□□□ -0.54
ERCC4-208ENST00000576348 F5H768 121 aa11.7□□□□□ -0.54
ERCC4-208ENST00000576348 NCR2O95944 276 aa11.7□□□□□ -0.54
ERCC4-208ENST00000576348 C12orf74Q32Q52 190 aa11.7□□□□□ -0.54
ERCC4-208ENST00000576348 SUMO4Q6EEV6 95 aa11.7□□□□□ -0.54
ERCC4-208ENST00000576348 C1orf196B1AJZ1 125 aa11.69□□□□□ -0.54
ERCC4-208ENST00000576348 SMKR1H3BMG3 65 aa11.69□□□□□ -0.54
ERCC4-208ENST00000576348 PPP1R17O96001 155 aa11.69□□□□□ -0.54
ERCC4-208ENST00000576348 LINC00315P59091 139 aa11.69□□□□□ -0.54
ERCC4-208ENST00000576348 NANOS2P60321 138 aaKnown RBP11.69□□□□□ -0.54
ERCC4-208ENST00000576348 UFSP1Q6NVU6 142 aa11.69□□□□□ -0.54
ERCC4-208ENST00000576348 PRELID3AQ96N28 172 aa11.69□□□□□ -0.54
ERCC4-208ENST00000576348 MUC4Q99102 2169 aa11.67□□□□□ -0.54
ERCC4-208ENST00000576348 GATA1P15976 413 aaPredicted RBP11.67□□□□□ -0.54
ERCC4-208ENST00000576348 SRIP30626 198 aa11.67□□□□□ -0.54
ERCC4-208ENST00000576348 OR10J3Q5JRS4 329 aa11.67□□□□□ -0.54
ERCC4-208ENST00000576348 PRADC1Q9BSG0 188 aa11.67□□□□□ -0.54
ERCC4-208ENST00000576348 HHLA3Q9XRX5 114 aa11.67□□□□□ -0.54
ERCC4-208ENST00000576348 K7EQD1 137 aa11.66□□□□□ -0.54
ERCC4-208ENST00000576348 RAB5BP61020 215 aa11.66□□□□□ -0.54
ERCC4-208ENST00000576348 FHL2Q14192 279 aa11.66□□□□□ -0.54
ERCC4-208ENST00000576348 RHOHQ15669 191 aa11.66□□□□□ -0.54
ERCC4-208ENST00000576348 Q6ZTC4 211 aa11.66□□□□□ -0.54
ERCC4-208ENST00000576348 LAMTOR2Q9Y2Q5 125 aa11.66□□□□□ -0.54
ERCC4-208ENST00000576348 TRBV6-4A0A1B0GX49 114 aa11.65□□□□□ -0.54
ERCC4-208ENST00000576348 M0QY20 66 aa11.65□□□□□ -0.54
ERCC4-208ENST00000576348 Q6ZSN1 163 aa11.65□□□□□ -0.54
ERCC4-208ENST00000576348 ALKBH7Q9BT30 221 aaPredicted RBP11.65□□□□□ -0.54
ERCC4-208ENST00000576348 PRO0255Q9UI72 69 aa11.65□□□□□ -0.54
ERCC4-208ENST00000576348 TNFRSF18Q9Y5U5 241 aa11.65□□□□□ -0.54
ERCC4-208ENST00000576348 TRAV10A0A0B4J240 114 aa11.64□□□□□ -0.55
ERCC4-208ENST00000576348 PAX4O43316 350 aa11.64□□□□□ -0.55
ERCC4-208ENST00000576348 TNFRSF6BO95407 300 aa11.64□□□□□ -0.55
ERCC4-208ENST00000576348 HOXA5P20719 270 aa11.64□□□□□ -0.55
ERCC4-208ENST00000576348 SLC25A29Q8N8R3 303 aa11.64□□□□□ -0.55
ERCC4-208ENST00000576348 RPL39LQ96EH5 51 aaKnown RBP11.64□□□□□ -0.55
ERCC4-208ENST00000576348 MAP1LC3AQ9H492 121 aa11.64□□□□□ -0.55
ERCC4-208ENST00000576348 ST20Q9HBF5 79 aa11.64□□□□□ -0.55
ERCC4-208ENST00000576348 NIT2Q9NQR4 276 aa11.64□□□□□ -0.55
ERCC4-208ENST00000576348 DEFB131BA0A096LNP1 70 aa11.63□□□□□ -0.55
ERCC4-208ENST00000576348 TRBV10-1A0A0K0K1A3 114 aa11.63□□□□□ -0.55
ERCC4-208ENST00000576348 PHOX2AO14813 284 aa11.63□□□□□ -0.55
ERCC4-208ENST00000576348 NPYP01303 97 aa11.63□□□□□ -0.55
ERCC4-208ENST00000576348 P0DMU3 169 aa11.63□□□□□ -0.55
ERCC4-208ENST00000576348 FAM231AP0DMU4 169 aa11.63□□□□□ -0.55
ERCC4-208ENST00000576348 FAM231CP0DMU5 169 aa11.63□□□□□ -0.55
ERCC4-208ENST00000576348 RPL36AP83881 106 aaKnown RBP11.63□□□□□ -0.55
ERCC4-208ENST00000576348 RPL36ALQ969Q0 106 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms