RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 A0A1W2PRX2 142 aa13.84□□□□□ -0.19
SPNS3-204ENST00000575194 H3BMM0 161 aa13.84□□□□□ -0.19
SPNS3-204ENST00000575194 PROK1P58294 105 aa13.84□□□□□ -0.19
SPNS3-204ENST00000575194 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.84□□□□□ -0.19
SPNS3-204ENST00000575194 MAP6D1Q9H9H5 199 aa13.84□□□□□ -0.19
SPNS3-204ENST00000575194 EREGO14944 169 aa13.83□□□□□ -0.2
SPNS3-204ENST00000575194 SPRY2O43597 315 aa13.83□□□□□ -0.2
SPNS3-204ENST00000575194 FXYD7P58549 80 aa13.83□□□□□ -0.2
SPNS3-204ENST00000575194 SUMO2P61956 95 aaKnown RBP13.83□□□□□ -0.2
SPNS3-204ENST00000575194 RASL10AQ92737 203 aa13.83□□□□□ -0.2
SPNS3-204ENST00000575194 CITED2Q99967 270 aaPredicted RBP13.83□□□□□ -0.2
SPNS3-204ENST00000575194 GOLT1BQ9Y3E0 138 aa13.83□□□□□ -0.2
SPNS3-204ENST00000575194 ATP5LO75964 103 aa13.82□□□□□ -0.2
SPNS3-204ENST00000575194 CD300EQ496F6 205 aaPredicted RBP13.82□□□□□ -0.2
SPNS3-204ENST00000575194 ORMDL2Q53FV1 153 aa13.82□□□□□ -0.2
SPNS3-204ENST00000575194 Q8N1Y9 231 aa13.82□□□□□ -0.2
SPNS3-204ENST00000575194 TMEM158Q8WZ71 300 aa13.82□□□□□ -0.2
SPNS3-204ENST00000575194 SNHG12Q9BXW3 62 aa13.82□□□□□ -0.2
SPNS3-204ENST00000575194 hDV102S1A0JD36 115 aa13.81□□□□□ -0.2
SPNS3-204ENST00000575194 C11orf44Q8N8P7 122 aa13.81□□□□□ -0.2
SPNS3-204ENST00000575194 KIF25-AS1Q9Y6Z4 181 aa13.81□□□□□ -0.2
SPNS3-204ENST00000575194 COL6A5A8TX70 2615 aa13.81□□□□□ -0.2
SPNS3-204ENST00000575194 LURAP1LQ8IV03 231 aa13.8□□□□□ -0.2
SPNS3-204ENST00000575194 CLUHP3Q96NS8 147 aa13.8□□□□□ -0.2
SPNS3-204ENST00000575194 CBY3A6NI87 242 aa13.79□□□□□ -0.2
SPNS3-204ENST00000575194 RPL32P62910 135 aaKnown RBP13.79□□□□□ -0.2
SPNS3-204ENST00000575194 KRTAP24-1Q3LI83 254 aa13.79□□□□□ -0.2
SPNS3-204ENST00000575194 PMCHL2Q9BQD1 86 aa13.79□□□□□ -0.2
SPNS3-204ENST00000575194 MCRIP2Q9BUT9 160 aaKnown RBP13.79□□□□□ -0.2
SPNS3-204ENST00000575194 MRPS16Q9Y3D3 137 aaKnown RBP13.79□□□□□ -0.2
SPNS3-204ENST00000575194 NUDT3O95989 172 aa13.78□□□□□ -0.2
SPNS3-204ENST00000575194 C18orf15Q96N68 181 aa13.78□□□□□ -0.2
SPNS3-204ENST00000575194 MDFICQ9P1T7 246 aa13.78□□□□□ -0.2
SPNS3-204ENST00000575194 ZNF256Q9Y2P7 627 aaPredicted RBP13.78□□□□□ -0.2
SPNS3-204ENST00000575194 LINC00315P59091 139 aa13.78□□□□□ -0.2
SPNS3-204ENST00000575194 RPL39LQ96EH5 51 aaKnown RBP13.78□□□□□ -0.2
SPNS3-204ENST00000575194 TCAPO15273 167 aa13.77□□□□□ -0.21
SPNS3-204ENST00000575194 CMC4P56277 68 aaPredicted RBP13.77□□□□□ -0.21
SPNS3-204ENST00000575194 HIST2H2BDQ6DRA6 164 aa13.77□□□□□ -0.21
SPNS3-204ENST00000575194 SLC25A34Q6PIV7 304 aa13.77□□□□□ -0.21
SPNS3-204ENST00000575194 MUC4Q99102 2169 aa13.77□□□□□ -0.21
SPNS3-204ENST00000575194 RBMY1BA6NDE4 496 aaKnown RBP13.76□□□□□ -0.21
SPNS3-204ENST00000575194 RBMY1EA6NEQ0 496 aaKnown RBP13.76□□□□□ -0.21
SPNS3-204ENST00000575194 RBMY1DP0C7P1 496 aaKnown RBP13.76□□□□□ -0.21
SPNS3-204ENST00000575194 G0S2P27469 103 aa13.76□□□□□ -0.21
SPNS3-204ENST00000575194 SUMO4Q6EEV6 95 aa13.76□□□□□ -0.21
SPNS3-204ENST00000575194 LINC00467Q9BRT7 94 aa13.76□□□□□ -0.21
SPNS3-204ENST00000575194 STAB1Q9NY15 2570 aa13.76□□□□□ -0.21
SPNS3-204ENST00000575194 F5H697 171 aa13.76□□□□□ -0.21
SPNS3-204ENST00000575194 INSP01308 110 aa13.76□□□□□ -0.21
SPNS3-204ENST00000575194 PRSS1P07477 247 aa13.76□□□□□ -0.21
SPNS3-204ENST00000575194 A0A087WWL8 130 aa13.75□□□□□ -0.21
SPNS3-204ENST00000575194 KRTAP10-3P60369 221 aa13.75□□□□□ -0.21
SPNS3-204ENST00000575194 ZNF415Q09FC8 603 aa13.75□□□□□ -0.21
SPNS3-204ENST00000575194 LINC01549A6NIU2 74 aa13.74□□□□□ -0.21
SPNS3-204ENST00000575194 OR11H12B2RN74 326 aa13.74□□□□□ -0.21
SPNS3-204ENST00000575194 RBMY1A1P0DJD3 496 aaKnown RBP13.74□□□□□ -0.21
SPNS3-204ENST00000575194 RBMY1CP0DJD4 496 aa13.74□□□□□ -0.21
SPNS3-204ENST00000575194 RBMY1FQ15415 496 aaKnown RBP13.74□□□□□ -0.21
SPNS3-204ENST00000575194 ZNF124Q15973 351 aa13.74□□□□□ -0.21
SPNS3-204ENST00000575194 CSTL1Q9H114 145 aa13.74□□□□□ -0.21
SPNS3-204ENST00000575194 JPT2Q9H910 190 aa13.74□□□□□ -0.21
SPNS3-204ENST00000575194 ZNF56Q15929 161 aa13.73□□□□□ -0.21
SPNS3-204ENST00000575194 ZNF876PQ49A33 203 aa13.73□□□□□ -0.21
SPNS3-204ENST00000575194 PIK3CD-AS1Q5SR53 167 aa13.73□□□□□ -0.21
SPNS3-204ENST00000575194 STHQ8IWL8 128 aa13.73□□□□□ -0.21
SPNS3-204ENST00000575194 TOMM6Q96B49 74 aa13.73□□□□□ -0.21
SPNS3-204ENST00000575194 AGRNO00468 2067 aa13.73□□□□□ -0.21
SPNS3-204ENST00000575194 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.73□□□□□ -0.21
SPNS3-204ENST00000575194 ODF1Q14990 250 aa13.73□□□□□ -0.21
SPNS3-204ENST00000575194 ODF3L2Q3SX64 289 aa13.73□□□□□ -0.21
SPNS3-204ENST00000575194 FAM74A4Q5TZK3 123 aa13.73□□□□□ -0.21
SPNS3-204ENST00000575194 TRBV6-5A0A0K0K1A5 114 aa13.72□□□□□ -0.21
SPNS3-204ENST00000575194 A0A1B0GV90 55 aa13.72□□□□□ -0.21
SPNS3-204ENST00000575194 COX8AP10176 69 aa13.72□□□□□ -0.21
SPNS3-204ENST00000575194 PTH2Q96A98 100 aa13.72□□□□□ -0.21
SPNS3-204ENST00000575194 VCYO14598 125 aa13.71□□□□□ -0.21
SPNS3-204ENST00000575194 BATFQ16520 125 aa13.71□□□□□ -0.21
SPNS3-204ENST00000575194 SAP30O75446 220 aa13.7□□□□□ -0.22
SPNS3-204ENST00000575194 CRYGDP07320 174 aa13.7□□□□□ -0.22
SPNS3-204ENST00000575194 COL5A1-AS1Q5SY13 56 aa13.7□□□□□ -0.22
SPNS3-204ENST00000575194 TRPT1Q86TN4 253 aaKnown RBP13.7□□□□□ -0.22
SPNS3-204ENST00000575194 KIR2DL4Q99706 377 aa13.7□□□□□ -0.22
SPNS3-204ENST00000575194 ZMAT4Q9H898 229 aa13.7□□□□□ -0.22
SPNS3-204ENST00000575194 DKK2Q9UBU2 259 aa13.7□□□□□ -0.22
SPNS3-204ENST00000575194 M0R2P5 195 aa13.7□□□□□ -0.22
SPNS3-204ENST00000575194 DPM2O94777 84 aa13.7□□□□□ -0.22
SPNS3-204ENST00000575194 IGKCP01834 107 aa13.7□□□□□ -0.22
SPNS3-204ENST00000575194 NUTF2P61970 127 aaKnown RBP13.7□□□□□ -0.22
SPNS3-204ENST00000575194 SCGB3A1Q96QR1 104 aa13.7□□□□□ -0.22
SPNS3-204ENST00000575194 LINC01587Q99440 93 aa13.7□□□□□ -0.22
SPNS3-204ENST00000575194 VWFP04275 2813 aa13.69□□□□□ -0.22
SPNS3-204ENST00000575194 TRAV12-1A0A0B4J245 112 aa13.69□□□□□ -0.22
SPNS3-204ENST00000575194 H7C1H1 209 aa13.69□□□□□ -0.22
SPNS3-204ENST00000575194 POLR2KP53803 58 aaKnown RBP13.69□□□□□ -0.22
SPNS3-204ENST00000575194 NDUFA11Q86Y39 141 aa13.69□□□□□ -0.22
SPNS3-204ENST00000575194 SPXQ9BT56 116 aa13.69□□□□□ -0.22
SPNS3-204ENST00000575194 ADARB2-AS1A8MUL3 147 aa13.68□□□□□ -0.22
SPNS3-204ENST00000575194 A8MWV9 139 aa13.68□□□□□ -0.22
SPNS3-204ENST00000575194 HTN1P15515 57 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms