RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 G3V4G9 280 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 SYT8Q8NBV8 401 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 TIMM17AQ99595 171 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 AKAP6Q13023 2319 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 CHD8Q9HCK8 2581 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 IGHV1OR15-1A0A075B7D0 117 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 SDHAF1A6NFY7 115 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 F5H697 171 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 IGKV3-20P01619 116 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 ELANEP08246 267 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 SYNJ2BPP57105 145 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 PMVKQ15126 192 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 MORN3Q6PF18 240 aaPredicted RBP6.63□□□□□ -1.35
NCBP3-204ENST00000574911 KIR2DL4Q99706 377 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 C11orf86A6NJI1 115 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 TGFAP01135 160 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 FSHBP01225 129 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 RPL39P62891 51 aaKnown RBP6.63□□□□□ -1.35
NCBP3-204ENST00000574911 PAPPA-AS1Q5QFB9 102 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 Q8N1Y9 231 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 ZNF702PQ9H963 129 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 VPREB3Q9UKI3 123 aa6.63□□□□□ -1.35
NCBP3-204ENST00000574911 NCOR2Q9Y618 2525 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 M0QY20 66 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 SPINK13Q1W4C9 94 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 Q6YL49 198 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 FOXI2Q6ZQN5 318 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 ZNF479Q96JC4 524 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 ZNF815PA8K554 130 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 RRN3P1Q2M238 152 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 AMTNQ6UX39 209 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 DEFB104AQ8WTQ1 72 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 PLEKHB2Q96CS7 222 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 UBE2E2Q96LR5 201 aa6.62□□□□□ -1.35
NCBP3-204ENST00000574911 HOXD3P31249 432 aaPredicted RBP6.61□□□□□ -1.35
NCBP3-204ENST00000574911 CD300EQ496F6 205 aaPredicted RBP6.61□□□□□ -1.35
NCBP3-204ENST00000574911 FAM74A4Q5TZK3 123 aa6.61□□□□□ -1.35
NCBP3-204ENST00000574911 MAPK1IP1LQ8NDC0 245 aa6.61□□□□□ -1.35
NCBP3-204ENST00000574911 ZNF256Q9Y2P7 627 aaPredicted RBP6.61□□□□□ -1.35
NCBP3-204ENST00000574911 HERVK_113P61574 105 aa6.61□□□□□ -1.35
NCBP3-204ENST00000574911 RHOHQ15669 191 aa6.61□□□□□ -1.35
NCBP3-204ENST00000574911 ZNF56Q15929 161 aa6.61□□□□□ -1.35
NCBP3-204ENST00000574911 NSUN5P1Q3KNT7 163 aa6.61□□□□□ -1.35
NCBP3-204ENST00000574911 ZNF876PQ49A33 203 aa6.61□□□□□ -1.35
NCBP3-204ENST00000574911 TRPT1Q86TN4 253 aaKnown RBP6.61□□□□□ -1.35
NCBP3-204ENST00000574911 DUX5Q96PT3 197 aa6.61□□□□□ -1.35
NCBP3-204ENST00000574911 KLHL30-AS1Q8NEE0 82 aa6.6□□□□□ -1.35
NCBP3-204ENST00000574911 HOXA3O43365 443 aaPredicted RBP6.6□□□□□ -1.35
NCBP3-204ENST00000574911 EMP1P54849 157 aa6.6□□□□□ -1.35
NCBP3-204ENST00000574911 SCGB2A2Q13296 93 aa6.6□□□□□ -1.35
NCBP3-204ENST00000574911 ZNRF2Q8NHG8 242 aa6.6□□□□□ -1.35
NCBP3-204ENST00000574911 TRGV11A0A075B6L2 103 aa6.59□□□□□ -1.35
NCBP3-204ENST00000574911 IGHV4-31P0DP07 118 aa6.59□□□□□ -1.35
NCBP3-204ENST00000574911 F8W1H4 67 aa6.59□□□□□ -1.35
NCBP3-204ENST00000574911 RBMY1A1P0DJD3 496 aaKnown RBP6.59□□□□□ -1.35
NCBP3-204ENST00000574911 RBMY1CP0DJD4 496 aa6.59□□□□□ -1.35
NCBP3-204ENST00000574911 P0DMU3 169 aa6.59□□□□□ -1.35
NCBP3-204ENST00000574911 FAM231AP0DMU4 169 aa6.59□□□□□ -1.35
NCBP3-204ENST00000574911 FAM231CP0DMU5 169 aa6.59□□□□□ -1.35
NCBP3-204ENST00000574911 RBMY1FQ15415 496 aaKnown RBP6.59□□□□□ -1.35
NCBP3-204ENST00000574911 TCTEX1D4Q5JR98 221 aa6.59□□□□□ -1.35
NCBP3-204ENST00000574911 SCGB1D4Q6XE38 83 aa6.59□□□□□ -1.35
NCBP3-204ENST00000574911 A0A0J9YY99 117 aa6.58□□□□□ -1.36
NCBP3-204ENST00000574911 A8MTW9 85 aa6.58□□□□□ -1.36
NCBP3-204ENST00000574911 UBE2D1P51668 147 aa6.58□□□□□ -1.36
NCBP3-204ENST00000574911 TSPEAR-AS2P59090 65 aa6.58□□□□□ -1.36
NCBP3-204ENST00000574911 NFE4Q86UQ8 179 aa6.58□□□□□ -1.36
NCBP3-204ENST00000574911 SPTAN1Q13813 2472 aaKnown RBP6.58□□□□□ -1.36
NCBP3-204ENST00000574911 PKD1L2Q7Z442 2459 aa6.58□□□□□ -1.36
NCBP3-204ENST00000574911 I3L3M4 83 aa6.58□□□□□ -1.36
NCBP3-204ENST00000574911 EDA2RQ9HAV5 297 aa6.58□□□□□ -1.36
NCBP3-204ENST00000574911 BEX4Q9NWD9 120 aaPredicted RBP6.58□□□□□ -1.36
NCBP3-204ENST00000574911 CFAP46Q8IYW2 2715 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 TEX48A0A1B0GUV7 120 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 KNCNA6PVL3 124 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 TMEM170BQ5T4T1 132 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 C18orf65Q6ZTR6 163 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 C20orf203Q8NBC4 194 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 AMELXQ99217 191 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 SPANXB1Q9NS25 103 aaPredicted RBP6.57□□□□□ -1.36
NCBP3-204ENST00000574911 H3BMG7 143 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 SLURP1P55000 103 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 RPL24P83731 157 aaKnown RBP6.57□□□□□ -1.36
NCBP3-204ENST00000574911 SRSF9Q13242 221 aaKnown RBP eCLIP6.57□□□□□ -1.361e-6■■■■□ 22.5
NCBP3-204ENST00000574911 WFDC2Q14508 124 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 Q8N2B8 174 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 OPRPNQ99935 248 aaPredicted RBP6.57□□□□□ -1.36
NCBP3-204ENST00000574911 PRO0461Q9UI25 63 aa6.57□□□□□ -1.36
NCBP3-204ENST00000574911 TRAV2A0A0B4J234 112 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 COTL1Q14019 142 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 PGPEP1Q9NXJ5 209 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 DOPEY1Q5JWR5 2465 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 TMEM223A0PJW6 202 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 RBMY1BA6NDE4 496 aaKnown RBP6.56□□□□□ -1.36
NCBP3-204ENST00000574911 RBMY1EA6NEQ0 496 aaKnown RBP6.56□□□□□ -1.36
NCBP3-204ENST00000574911 RBMY1DP0C7P1 496 aaKnown RBP6.56□□□□□ -1.36
NCBP3-204ENST00000574911 DEFB131AP59861 70 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 SLC25A29Q8N8R3 303 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 COL12A1Q99715 3063 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 CELSR2Q9HCU4 2923 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 219.5 ms