RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 RNF223E7ERA6 249 aa9.53□□□□□ -0.88
PCDHGA9-201ENST00000573521 HAMPP81172 84 aa9.53□□□□□ -0.88
PCDHGA9-201ENST00000573521 VSIG2Q96IQ7 327 aa9.53□□□□□ -0.88
PCDHGA9-201ENST00000573521 CHD9Q3L8U1 2897 aa9.53□□□□□ -0.88
PCDHGA9-201ENST00000573521 NCKAP5O14513 1909 aa9.53□□□□□ -0.88
PCDHGA9-201ENST00000573521 GPR179Q6PRD1 2367 aa9.52□□□□□ -0.88
PCDHGA9-201ENST00000573521 TRBV7-3A0A075B6L6 115 aa9.52□□□□□ -0.88
PCDHGA9-201ENST00000573521 A0A0J9YXV3 536 aa9.52□□□□□ -0.88
PCDHGA9-201ENST00000573521 PROP1O75360 226 aa9.52□□□□□ -0.88
PCDHGA9-201ENST00000573521 SND1-IT1Q9HBX3 110 aa9.52□□□□□ -0.88
PCDHGA9-201ENST00000573521 C10orf142B7Z368 130 aa9.52□□□□□ -0.89
PCDHGA9-201ENST00000573521 GATA1P15976 413 aaPredicted RBP9.52□□□□□ -0.89
PCDHGA9-201ENST00000573521 RPL39LQ96EH5 51 aaKnown RBP9.52□□□□□ -0.89
PCDHGA9-201ENST00000573521 ALPK3Q96L96 1907 aa9.52□□□□□ -0.89
PCDHGA9-201ENST00000573521 F5H768 121 aa9.52□□□□□ -0.89
PCDHGA9-201ENST00000573521 CRYGBP07316 175 aa9.52□□□□□ -0.89
PCDHGA9-201ENST00000573521 C10orf105Q8TEF2 133 aa9.52□□□□□ -0.89
PCDHGA9-201ENST00000573521 KIF26AQ9ULI4 1882 aaPredicted RBP9.52□□□□□ -0.89
PCDHGA9-201ENST00000573521 MSRB1Q9NZV6 116 aa9.52□□□□□ -0.89
PCDHGA9-201ENST00000573521 IGHV3-16A0A0C4DH30 117 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 SEM1Q6ZVN7 128 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 NDUFA11Q86Y39 141 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 COX7B2Q8TF08 81 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 TP73-AS1Q9UF72 201 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 POLEQ07864 2286 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 GTF3C1Q12789 2109 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 CREBBPQ92793 2442 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 ATP5EP2Q5VTU8 51 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 SELENOKQ9Y6D0 94 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 C2orf16Q68DN1 1984 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 F6UB75 175 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 WFDC2Q14508 124 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 UBE2DNLQ8IWF7 75 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 Q8N7P7 452 aa9.51□□□□□ -0.89
PCDHGA9-201ENST00000573521 hADV29S1A0JD25 119 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 J3KT08 172 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 IGF1P05019 195 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 PRB4P10163 310 aaPredicted RBP9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 FUSP35637 526 aaKnown RBP eCLIP9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 Q6ZPA2 131 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 DOCK7Q96N67 2140 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 KIAA1549LQ6ZVL6 1849 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 A0A0J9YX75 114 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 LGALS9O00182 355 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 P0DMU3 169 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 FAM231AP0DMU4 169 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 FAM231CP0DMU5 169 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 MIAQ16674 131 aa9.5□□□□□ -0.89
PCDHGA9-201ENST00000573521 DEFB112Q30KQ8 113 aa9.49□□□□□ -0.89
PCDHGA9-201ENST00000573521 MRPL36Q9P0J6 103 aaKnown RBP9.49□□□□□ -0.89
PCDHGA9-201ENST00000573521 SPRNQ5BIV9 151 aa9.49□□□□□ -0.89
PCDHGA9-201ENST00000573521 IGHV3-38A0A0C4DH36 116 aa9.49□□□□□ -0.89
PCDHGA9-201ENST00000573521 TMEM256-PLSCR3K7ERE1 68 aa9.49□□□□□ -0.89
PCDHGA9-201ENST00000573521 TIMM17BO60830 172 aa9.49□□□□□ -0.89
PCDHGA9-201ENST00000573521 DIDO1Q9BTC0 2240 aaKnown RBP9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 CCL24O00175 119 aa9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 PSCAO43653 123 aa9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 ANGP03950 147 aaKnown RBP9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 TTC28Q96AY4 2481 aa9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 COX7A2LO14548 114 aa9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 C9orf66Q5T8R8 295 aa9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 NCOA6Q14686 2063 aaPredicted RBP9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 PIK3CD-AS1Q5SR53 167 aa9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 NEXN-AS1Q8NBZ9 246 aa9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 RITA1Q96K30 269 aa9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 CADP27708 2225 aa9.48□□□□□ -0.89
PCDHGA9-201ENST00000573521 A6NDX4 124 aa9.47□□□□□ -0.89
PCDHGA9-201ENST00000573521 B5MCH6 92 aa9.47□□□□□ -0.89
PCDHGA9-201ENST00000573521 PRAC2D3DTV9 90 aa9.47□□□□□ -0.89
PCDHGA9-201ENST00000573521 TNFRSF13BO14836 293 aaPredicted RBP9.47□□□□□ -0.89
PCDHGA9-201ENST00000573521 PYGO1Q9Y3Y4 419 aa9.47□□□□□ -0.89
PCDHGA9-201ENST00000573521 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.47□□□□□ -0.89
PCDHGA9-201ENST00000573521 IGKV2-29A2NJV5 120 aaPredicted RBP9.47□□□□□ -0.89
PCDHGA9-201ENST00000573521 ABCA1O95477 2261 aa9.46□□□□□ -0.89
PCDHGA9-201ENST00000573521 IGHV4-4A0A075B6R2 117 aa9.46□□□□□ -0.89
PCDHGA9-201ENST00000573521 INSL3P51460 131 aa9.46□□□□□ -0.89
PCDHGA9-201ENST00000573521 USF3Q68DE3 2245 aa9.46□□□□□ -0.89
PCDHGA9-201ENST00000573521 TRAV4A0A0B4J268 109 aa9.46□□□□□ -0.89
PCDHGA9-201ENST00000573521 E7EUB6 86 aa9.46□□□□□ -0.89
PCDHGA9-201ENST00000573521 Q96MF0 132 aa9.46□□□□□ -0.9
PCDHGA9-201ENST00000573521 XIRP2A4UGR9 3374 aa9.46□□□□□ -0.9
PCDHGA9-201ENST00000573521 C4orf3Q8WVX3 66 aa9.46□□□□□ -0.9
PCDHGA9-201ENST00000573521 SPTAN1Q13813 2472 aaKnown RBP9.46□□□□□ -0.9
PCDHGA9-201ENST00000573521 IGHV4-59P01825 116 aa9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 TMEM263Q8WUH6 116 aaKnown RBP9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 NOP10Q9NPE3 64 aaKnown RBP9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 NXPH4O95158 308 aa9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 TIRAPP58753 221 aa9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 GDF5OSQ5U4N7 250 aa9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 DEFB104AQ8WTQ1 72 aa9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 TRBV30A0A0K0K1B3 111 aa9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 IGHV3-30-3P0DP02 117 aa9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 MUC7Q8TAX7 377 aa9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 CNFNQ9BYD5 112 aa9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 ADAMTS9Q9P2N4 1935 aa9.45□□□□□ -0.9
PCDHGA9-201ENST00000573521 HIST2H2BCQ6DN03 193 aa9.44□□□□□ -0.9
PCDHGA9-201ENST00000573521 HIST2H2BDQ6DRA6 164 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms