RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 EIF5AP63241 154 aaKnown RBP5.07□□□□□ -1.6
NUP88-205ENST00000572809 CFAP126Q5VTH2 177 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 DPPA3Q6W0C5 159 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 SH2D6Q7Z4S9 175 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 SFT2D1Q8WV19 159 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 MBD3L1Q8WWY6 194 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 ZNF471Q9BX82 626 aaPredicted RBP5.07□□□□□ -1.6
NUP88-205ENST00000572809 LY96Q9Y6Y9 160 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 IGHV3-73A0A0B4J1V6 119 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 LOC100131303A0A0U1RQF7 123 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 TRBV6-4A0A1B0GX49 114 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 PAGE4O60829 102 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 ASIPP42127 132 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 LINC00315P59091 139 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 ZNF506Q5JVG8 444 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 TMUB2Q71RG4 321 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 COX8CQ7Z4L0 72 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 Q86TA4 180 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 SLC25A29Q8N8R3 303 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 NHLRC2Q8NBF2 726 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 FAM213BQ8TBF2 198 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 FMC1Q96HJ9 113 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 TCEAL7Q9BRU2 100 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 PRADC1Q9BSG0 188 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 PKD1P98161 4303 aa5.06□□□□□ -1.6
NUP88-205ENST00000572809 TRBV6-1A0A0K0K1D8 114 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 A0A1B0GV50 99 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 A8MWV9 139 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 C16orf90A8MZG2 172 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 B4DEV8 164 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 KRBOX1C9JBD0 128 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 K7EP13 123 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 BCL2L11O43521 198 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 PFDN1O60925 122 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 TPT1P13693 172 aaKnown RBP5.05□□□□□ -1.6
NUP88-205ENST00000572809 EVI2AP22794 236 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 RHOHQ15669 191 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 LGALSLQ3ZCW2 172 aaPredicted RBP5.05□□□□□ -1.6
NUP88-205ENST00000572809 DNLZQ5SXM8 178 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 SPATA12Q7Z6I5 190 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 NFE4Q86UQ8 179 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 WFDC10BQ8IUB3 73 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 ZC2HC1AQ96GY0 325 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 IL36BQ9NZH7 164 aa5.05□□□□□ -1.6
NUP88-205ENST00000572809 GRIFINA4D1Z8 144 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 USP17L23D6RBM5 183 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 M0R036 132 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 RHODO00212 210 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 SH2D1AO60880 128 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 LTAP01374 205 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 S100A9P06702 114 aaKnown RBP5.04□□□□□ -1.6
NUP88-205ENST00000572809 ARMS2P0C7Q2 107 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 DNAH10OSP0CZ25 163 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 MGST1P10620 155 aaKnown RBP5.04□□□□□ -1.6
NUP88-205ENST00000572809 AKR1C3P42330 323 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 ZNF674Q2M3X9 581 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 PIK3CD-AS1Q5SR53 167 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 FAM162BQ5T6X4 162 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 ZFP2Q6ZN57 461 aa5.04□□□□□ -1.6
NUP88-205ENST00000572809 Q6ZRN7 208 aaPredicted RBP5.04□□□□□ -1.6
NUP88-205ENST00000572809 TRAV8-6A0A0B4J262 113 aa5.03□□□□□ -1.6
NUP88-205ENST00000572809 IGHV3-38A0A0C4DH36 116 aa5.03□□□□□ -1.6
NUP88-205ENST00000572809 H3BVH4 76 aa5.03□□□□□ -1.6
NUP88-205ENST00000572809 ATP6V0E2Q8NHE4 81 aa5.03□□□□□ -1.6
NUP88-205ENST00000572809 GTSF1LQ9H1H1 148 aa5.03□□□□□ -1.6
NUP88-205ENST00000572809 PARLQ9H300 379 aa5.03□□□□□ -1.6
NUP88-205ENST00000572809 JPT2Q9H910 190 aa5.03□□□□□ -1.6
NUP88-205ENST00000572809 MSRB1Q9NZV6 116 aa5.03□□□□□ -1.6
NUP88-205ENST00000572809 PHLDA3Q9Y5J5 127 aa5.03□□□□□ -1.6
NUP88-205ENST00000572809 TMSB15BA0A087X1C1 80 aa5.02□□□□□ -1.61
NUP88-205ENST00000572809 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
NUP88-205ENST00000572809 CRYGDP07320 174 aa5.02□□□□□ -1.61
NUP88-205ENST00000572809 RAB5CP51148 216 aa5.02□□□□□ -1.61
NUP88-205ENST00000572809 OR10J3Q5JRS4 329 aa5.02□□□□□ -1.61
NUP88-205ENST00000572809 LELP1Q5T871 98 aa5.02□□□□□ -1.61
NUP88-205ENST00000572809 EIF5AL1Q6IS14 154 aaKnown RBP5.02□□□□□ -1.61
NUP88-205ENST00000572809 UFSP1Q6NVU6 142 aa5.02□□□□□ -1.61
NUP88-205ENST00000572809 BAGE2Q86Y30 109 aa5.02□□□□□ -1.61
NUP88-205ENST00000572809 C10orf126Q8N4M7 172 aa5.02□□□□□ -1.61
NUP88-205ENST00000572809 SAMD10Q9BYL1 202 aa5.02□□□□□ -1.61
NUP88-205ENST00000572809 SCRT2Q9NQ03 307 aa5.02□□□□□ -1.61
NUP88-205ENST00000572809 TRAV1-1A0A0B4J248 108 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 GAGE12JA6NER3 117 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 TEX46H3BTG2 121 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 M0R381 172 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 CDK2AP2O75956 126 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 ERVFC1-1P60608 527 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 CCL20P78556 96 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 GAGE1Q13065 139 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 GAGE4Q13068 117 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 GAGE5Q13069 117 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 LINC01556Q5JQF7 62 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 TCTE3Q8IZS6 198 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 SFRP2Q96HF1 295 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 MANBALQ9NQG1 85 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 GNG13Q9P2W3 67 aa5.01□□□□□ -1.61
NUP88-205ENST00000572809 A0A087WTM6 91 aa5□□□□□ -1.61
NUP88-205ENST00000572809 IBA57-AS1B1ANH7 110 aa5□□□□□ -1.61
NUP88-205ENST00000572809 IGHV3-30P01768 117 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms