RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 C1orf196B1AJZ1 125 aa8.53□□□□□ -1.04
CDRT1-206ENST00000571263 H7C1H1 209 aa8.53□□□□□ -1.04
CDRT1-206ENST00000571263 CRYGDP07320 174 aa8.53□□□□□ -1.04
CDRT1-206ENST00000571263 RAB4AP20338 218 aa8.53□□□□□ -1.04
CDRT1-206ENST00000571263 DEFA6Q01524 100 aa8.53□□□□□ -1.04
CDRT1-206ENST00000571263 CFAP126Q5VTH2 177 aa8.53□□□□□ -1.04
CDRT1-206ENST00000571263 Q6ZTI0 123 aa8.53□□□□□ -1.04
CDRT1-206ENST00000571263 LAMTOR2Q9Y2Q5 125 aa8.53□□□□□ -1.04
CDRT1-206ENST00000571263 KIF25-AS1Q9Y6Z4 181 aa8.53□□□□□ -1.04
CDRT1-206ENST00000571263 TRGC2P03986 189 aa8.52□□□□□ -1.05
CDRT1-206ENST00000571263 CKS2P33552 79 aa8.52□□□□□ -1.05
CDRT1-206ENST00000571263 SLAQ13239 276 aa8.52□□□□□ -1.05
CDRT1-206ENST00000571263 FAM222AQ5U5X8 452 aa8.52□□□□□ -1.05
CDRT1-206ENST00000571263 AMN1Q8IY45 258 aa8.52□□□□□ -1.05
CDRT1-206ENST00000571263 ORMDL3Q8N138 153 aa8.52□□□□□ -1.05
CDRT1-206ENST00000571263 EDA2RQ9HAV5 297 aa8.52□□□□□ -1.05
CDRT1-206ENST00000571263 GAGE12BA1L429 117 aa8.51□□□□□ -1.05
CDRT1-206ENST00000571263 F5H697 171 aa8.51□□□□□ -1.05
CDRT1-206ENST00000571263 PHOX2AO14813 284 aa8.51□□□□□ -1.05
CDRT1-206ENST00000571263 GAGE7O76087 117 aa8.51□□□□□ -1.05
CDRT1-206ENST00000571263 GAGE12FP0CL80 117 aa8.51□□□□□ -1.05
CDRT1-206ENST00000571263 GAGE12GP0CL81 117 aa8.51□□□□□ -1.05
CDRT1-206ENST00000571263 GAGE12IP0CL82 117 aa8.51□□□□□ -1.05
CDRT1-206ENST00000571263 RAB5BP61020 215 aa8.51□□□□□ -1.05
CDRT1-206ENST00000571263 DAD1P61803 113 aa8.51□□□□□ -1.05
CDRT1-206ENST00000571263 FAM74A4Q5TZK3 123 aa8.51□□□□□ -1.05
CDRT1-206ENST00000571263 RNF185Q96GF1 192 aa8.51□□□□□ -1.05
CDRT1-206ENST00000571263 A0A087WWL8 130 aa8.5□□□□□ -1.05
CDRT1-206ENST00000571263 MGPP08493 103 aa8.5□□□□□ -1.05
CDRT1-206ENST00000571263 LINC00315P59091 139 aa8.5□□□□□ -1.05
CDRT1-206ENST00000571263 ZNF56Q15929 161 aa8.5□□□□□ -1.05
CDRT1-206ENST00000571263 MRPL51Q4U2R6 128 aaKnown RBP8.5□□□□□ -1.05
CDRT1-206ENST00000571263 UFSP1Q6NVU6 142 aa8.5□□□□□ -1.05
CDRT1-206ENST00000571263 RETNQ9HD89 108 aa8.5□□□□□ -1.05
CDRT1-206ENST00000571263 U3KQK5 164 aa8.5□□□□□ -1.05
CDRT1-206ENST00000571263 TRBV6-4A0A1B0GX49 114 aa8.49□□□□□ -1.05
CDRT1-206ENST00000571263 IGHV3-53P01767 116 aa8.49□□□□□ -1.05
CDRT1-206ENST00000571263 ATP5G1P05496 136 aa8.49□□□□□ -1.05
CDRT1-206ENST00000571263 DEFB130BP0DP73 79 aa8.49□□□□□ -1.05
CDRT1-206ENST00000571263 DEFB130AP0DP74 79 aa8.49□□□□□ -1.05
CDRT1-206ENST00000571263 DNAJC30Q96LL9 226 aa8.49□□□□□ -1.05
CDRT1-206ENST00000571263 SAMD10Q9BYL1 202 aa8.49□□□□□ -1.05
CDRT1-206ENST00000571263 JPT2Q9H910 190 aa8.49□□□□□ -1.05
CDRT1-206ENST00000571263 MUC4Q99102 2169 aa8.48□□□□□ -1.05
CDRT1-206ENST00000571263 TRGV4A0A0C4DH28 118 aa8.48□□□□□ -1.05
CDRT1-206ENST00000571263 TRBV10-1A0A0K0K1A3 114 aa8.48□□□□□ -1.05
CDRT1-206ENST00000571263 D6R8Y8 96 aa8.48□□□□□ -1.05
CDRT1-206ENST00000571263 DEFB4AO15263 64 aa8.48□□□□□ -1.05
CDRT1-206ENST00000571263 OR10J3Q5JRS4 329 aa8.48□□□□□ -1.05
CDRT1-206ENST00000571263 PRELID3AQ96N28 172 aa8.48□□□□□ -1.05
CDRT1-206ENST00000571263 ALKBH7Q9BT30 221 aaPredicted RBP8.48□□□□□ -1.05
CDRT1-206ENST00000571263 A0A0J9YWU9 116 aa8.47□□□□□ -1.05
CDRT1-206ENST00000571263 PRSS47A8MTI9 375 aa8.47□□□□□ -1.05
CDRT1-206ENST00000571263 KIAA1644Q3SXP7 199 aa8.47□□□□□ -1.05
CDRT1-206ENST00000571263 SUMO4Q6EEV6 95 aa8.47□□□□□ -1.05
CDRT1-206ENST00000571263 C11orf45Q8TAV5 145 aa8.47□□□□□ -1.05
CDRT1-206ENST00000571263 ZNF479Q96JC4 524 aa8.47□□□□□ -1.05
CDRT1-206ENST00000571263 C20orf78Q9BR46 151 aa8.47□□□□□ -1.05
CDRT1-206ENST00000571263 NIT2Q9NQR4 276 aa8.47□□□□□ -1.05
CDRT1-206ENST00000571263 PKD1L1Q8TDX9 2849 aa8.47□□□□□ -1.05
CDRT1-206ENST00000571263 TRBV6-5A0A0K0K1A5 114 aa8.46□□□□□ -1.06
CDRT1-206ENST00000571263 M0QY20 66 aa8.46□□□□□ -1.06
CDRT1-206ENST00000571263 GATA1P15976 413 aaPredicted RBP8.46□□□□□ -1.06
CDRT1-206ENST00000571263 SRIP30626 198 aa8.46□□□□□ -1.06
CDRT1-206ENST00000571263 Q0VG73 95 aa8.46□□□□□ -1.06
CDRT1-206ENST00000571263 PRADC1Q9BSG0 188 aa8.46□□□□□ -1.06
CDRT1-206ENST00000571263 MAP1LC3AQ9H492 121 aa8.46□□□□□ -1.06
CDRT1-206ENST00000571263 PRO0255Q9UI72 69 aa8.46□□□□□ -1.06
CDRT1-206ENST00000571263 HHLA3Q9XRX5 114 aa8.46□□□□□ -1.06
CDRT1-206ENST00000571263 FBN3Q75N90 2809 aa8.46□□□□□ -1.06
CDRT1-206ENST00000571263 TNFRSF6BO95407 300 aa8.45□□□□□ -1.06
CDRT1-206ENST00000571263 RPL32P62910 135 aaKnown RBP8.45□□□□□ -1.06
CDRT1-206ENST00000571263 FHL2Q14192 279 aa8.45□□□□□ -1.06
CDRT1-206ENST00000571263 RHOHQ15669 191 aa8.45□□□□□ -1.06
CDRT1-206ENST00000571263 C12orf74Q32Q52 190 aa8.45□□□□□ -1.06
CDRT1-206ENST00000571263 ST20Q9HBF5 79 aa8.45□□□□□ -1.06
CDRT1-206ENST00000571263 TNFRSF18Q9Y5U5 241 aa8.45□□□□□ -1.06
CDRT1-206ENST00000571263 IGHV3-73A0A0B4J1V6 119 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 K7EMI3 77 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 K7EQD1 137 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 TCAPO15273 167 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 HIST1H2BKO60814 126 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 HIST1H2BJP06899 126 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 HIST1H2BOP23527 126 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 HIST1H2BBP33778 126 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 HIST1H2BDP58876 126 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 SUMO2P61956 95 aaKnown RBP8.44□□□□□ -1.06
CDRT1-206ENST00000571263 HIST1H2BCP62807 126 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 RPL36AP83881 106 aaKnown RBP8.44□□□□□ -1.06
CDRT1-206ENST00000571263 HIST2H2BEQ16778 126 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.44□□□□□ -1.06
CDRT1-206ENST00000571263 HIST1H2BHQ93079 126 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 RPL36ALQ969Q0 106 aaKnown RBP8.44□□□□□ -1.06
CDRT1-206ENST00000571263 HIST1H2BNQ99877 126 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 HIST1H2BMQ99879 126 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 NXT2Q9NPJ8 142 aaKnown RBP8.44□□□□□ -1.06
CDRT1-206ENST00000571263 CELA1Q9UNI1 258 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 CMYA5Q8N3K9 4069 aa8.44□□□□□ -1.06
CDRT1-206ENST00000571263 MGAM2Q2M2H8 2515 aa8.43□□□□□ -1.06
CDRT1-206ENST00000571263 TRAV26-2A0A0B4J265 109 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms