RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 TRGV1A0A0A0MS02 117 aa8.63□□□□□ -1.03
PCDHGA4-201ENST00000571252 MYCNOSP40205 109 aa8.63□□□□□ -1.03
PCDHGA4-201ENST00000571252 PHLDA1Q8WV24 401 aaPredicted RBP8.63□□□□□ -1.03
PCDHGA4-201ENST00000571252 ATP6V0BQ99437 205 aa8.63□□□□□ -1.03
PCDHGA4-201ENST00000571252 TRAV8-3A0A0A6YYJ7 113 aa8.62□□□□□ -1.03
PCDHGA4-201ENST00000571252 TLN2Q9Y4G6 2542 aa8.62□□□□□ -1.03
PCDHGA4-201ENST00000571252 J3QLI3 93 aa8.62□□□□□ -1.03
PCDHGA4-201ENST00000571252 HOXB4P17483 251 aaPredicted RBP8.62□□□□□ -1.03
PCDHGA4-201ENST00000571252 RBX1P62877 108 aa8.62□□□□□ -1.03
PCDHGA4-201ENST00000571252 GHRHP01286 108 aa8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 ZNF80P51504 273 aaPredicted RBP8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 IGHV1OR15-1A0A075B7D0 117 aa8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 RBMY1BA6NDE4 496 aaKnown RBP8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 RBMY1EA6NEQ0 496 aaKnown RBP8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 RBMY1DP0C7P1 496 aaKnown RBP8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 RBMY1A1P0DJD3 496 aaKnown RBP8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 RBMY1CP0DJD4 496 aa8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 DEFB131AP59861 70 aa8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 Q8N976 141 aa8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 Q8N9W7 124 aa8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 I3L3M4 83 aa8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 ZNF625Q96I27 306 aaPredicted RBP8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 UBE2E2Q96LR5 201 aa8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 CENPVL3A0A0U1RRI6 287 aa8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 ADARB2-AS1A8MUL3 147 aa8.61□□□□□ -1.03
PCDHGA4-201ENST00000571252 VWC2LB2RUY7 222 aa8.6□□□□□ -1.03
PCDHGA4-201ENST00000571252 SLC25A20O43772 301 aa8.6□□□□□ -1.03
PCDHGA4-201ENST00000571252 INSP01308 110 aa8.6□□□□□ -1.03
PCDHGA4-201ENST00000571252 TRAV13-1A0A0B4J241 112 aa8.6□□□□□ -1.03
PCDHGA4-201ENST00000571252 G3V4G9 280 aa8.6□□□□□ -1.03
PCDHGA4-201ENST00000571252 Q71RC1 249 aaPredicted RBP8.6□□□□□ -1.03
PCDHGA4-201ENST00000571252 IGHV7-4-1A0A0J9YVY3 117 aa8.6□□□□□ -1.03
PCDHGA4-201ENST00000571252 PRIMA1Q86XR5 153 aa8.6□□□□□ -1.03
PCDHGA4-201ENST00000571252 ARHGAP32A7KAX9 2087 aa8.6□□□□□ -1.03
PCDHGA4-201ENST00000571252 RASL10AQ92737 203 aa8.6□□□□□ -1.03
PCDHGA4-201ENST00000571252 NDUFA12Q9UI09 145 aa8.59□□□□□ -1.03
PCDHGA4-201ENST00000571252 CRIP1P50238 77 aa8.59□□□□□ -1.03
PCDHGA4-201ENST00000571252 LINC00158P58513 81 aa8.59□□□□□ -1.03
PCDHGA4-201ENST00000571252 IGHV3-53P01767 116 aa8.59□□□□□ -1.03
PCDHGA4-201ENST00000571252 IGF2-ASQ6U949 168 aa8.58□□□□□ -1.04
PCDHGA4-201ENST00000571252 H3BMM0 161 aa8.58□□□□□ -1.04
PCDHGA4-201ENST00000571252 TMEM86BQ8N661 226 aa8.58□□□□□ -1.04
PCDHGA4-201ENST00000571252 UBE2WQ96B02 151 aa8.58□□□□□ -1.04
PCDHGA4-201ENST00000571252 ZNF48Q96MX3 618 aaPredicted RBP8.58□□□□□ -1.04
PCDHGA4-201ENST00000571252 IGLC6P0CF74 106 aa8.57□□□□□ -1.04
PCDHGA4-201ENST00000571252 DEFB130BP0DP73 79 aa8.57□□□□□ -1.04
PCDHGA4-201ENST00000571252 DEFB130AP0DP74 79 aa8.57□□□□□ -1.04
PCDHGA4-201ENST00000571252 CFC1BP0CG36 223 aa8.57□□□□□ -1.04
PCDHGA4-201ENST00000571252 CFC1P0CG37 223 aa8.57□□□□□ -1.04
PCDHGA4-201ENST00000571252 C9orf47Q6ZRZ4 202 aa8.57□□□□□ -1.04
PCDHGA4-201ENST00000571252 NTN5Q8WTR8 489 aaPredicted RBP8.57□□□□□ -1.04
PCDHGA4-201ENST00000571252 TRAV12-1A0A0B4J245 112 aa8.57□□□□□ -1.04
PCDHGA4-201ENST00000571252 IGLV2-11P01706 119 aa8.57□□□□□ -1.04
PCDHGA4-201ENST00000571252 CRYGBP07316 175 aa8.57□□□□□ -1.04
PCDHGA4-201ENST00000571252 RHODO00212 210 aa8.56□□□□□ -1.04
PCDHGA4-201ENST00000571252 PRB1P04280 392 aa8.56□□□□□ -1.04
PCDHGA4-201ENST00000571252 C16orf54Q6UWD8 224 aa8.56□□□□□ -1.04
PCDHGA4-201ENST00000571252 IGHV3-16A0A0C4DH30 117 aa8.56□□□□□ -1.04
PCDHGA4-201ENST00000571252 DEFB1P60022 68 aa8.56□□□□□ -1.04
PCDHGA4-201ENST00000571252 USP9XQ93008 2570 aaPredicted RBP8.56□□□□□ -1.04
PCDHGA4-201ENST00000571252 SPTBN4Q9H254 2564 aa8.56□□□□□ -1.04
PCDHGA4-201ENST00000571252 E9PLD3 99 aa8.56□□□□□ -1.04
PCDHGA4-201ENST00000571252 LINC01619G3V211 115 aa8.56□□□□□ -1.04
PCDHGA4-201ENST00000571252 ZFP2Q6ZN57 461 aa8.56□□□□□ -1.04
PCDHGA4-201ENST00000571252 RNASE13Q5GAN3 156 aaKnown RBP8.55□□□□□ -1.04
PCDHGA4-201ENST00000571252 PAX4O43316 350 aa8.55□□□□□ -1.04
PCDHGA4-201ENST00000571252 PSCAO43653 123 aa8.55□□□□□ -1.04
PCDHGA4-201ENST00000571252 C2orf91Q6ZV80 131 aa8.55□□□□□ -1.04
PCDHGA4-201ENST00000571252 SETD2Q9BYW2 2564 aaPredicted RBP8.55□□□□□ -1.04
PCDHGA4-201ENST00000571252 IGKV2D-26A0A0A0MRZ7 120 aa8.55□□□□□ -1.04
PCDHGA4-201ENST00000571252 IGHV3-38A0A0C4DH36 116 aa8.55□□□□□ -1.04
PCDHGA4-201ENST00000571252 BAALCQ8WXS3 180 aa8.55□□□□□ -1.04
PCDHGA4-201ENST00000571252 URB1-AS1Q96HZ7 61 aa8.55□□□□□ -1.04
PCDHGA4-201ENST00000571252 XCL2Q9UBD3 114 aa8.55□□□□□ -1.04
PCDHGA4-201ENST00000571252 TET2Q6N021 2002 aaPredicted RBP8.55□□□□□ -1.04
PCDHGA4-201ENST00000571252 RPL39P62891 51 aaKnown RBP8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 SRSF2Q01130 221 aaKnown RBP8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 RHOHQ15669 191 aa8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 SUMO4Q6EEV6 95 aa8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 TCTEX1D4Q5JR98 221 aa8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 GATD1Q8NB37 220 aa8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 ASPMQ8IZT6 3477 aa8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 A4D1N5 150 aa8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 ELANEP08246 267 aa8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 TOMM6Q96B49 74 aa8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 ABCA12Q86UK0 2595 aa8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 ZFP36P26651 326 aaKnown RBP8.54□□□□□ -1.04
PCDHGA4-201ENST00000571252 A0A0J9YXV3 536 aa8.53□□□□□ -1.04
PCDHGA4-201ENST00000571252 C11orf86A6NJI1 115 aa8.53□□□□□ -1.04
PCDHGA4-201ENST00000571252 LEPROTO15243 131 aa8.53□□□□□ -1.04
PCDHGA4-201ENST00000571252 TEN1Q86WV5 123 aa8.53□□□□□ -1.04
PCDHGA4-201ENST00000571252 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
PCDHGA4-201ENST00000571252 H3BUA1 57 aa8.53□□□□□ -1.04
PCDHGA4-201ENST00000571252 LGALS1P09382 135 aaKnown RBP8.53□□□□□ -1.04
PCDHGA4-201ENST00000571252 BLCAPP62952 87 aa8.53□□□□□ -1.04
PCDHGA4-201ENST00000571252 AJUBAQ96IF1 538 aa8.53□□□□□ -1.04
PCDHGA4-201ENST00000571252 C5orf56Q8N8D9 126 aa8.52□□□□□ -1.05
PCDHGA4-201ENST00000571252 JPT2Q9H910 190 aa8.52□□□□□ -1.05
PCDHGA4-201ENST00000571252 USP9YO00507 2555 aaPredicted RBP8.52□□□□□ -1.05
PCDHGA4-201ENST00000571252 FOXI1Q12951 378 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms